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The map label for this gene is ftrA [H]

Identifier: 238894642

GI number: 238894642

Start: 2533862

End: 2534959

Strand: Reverse

Name: ftrA [H]

Synonym: KP1_2644

Alternate gene names: 238894642

Gene position: 2534959-2533862 (Counterclockwise)

Preceding gene: 238894650

Following gene: 238894641

Centisome position: 48.3

GC content: 64.85

Gene sequence:

>1098_bases
ATGACAGAAAACGCTAACATCCTGACAACCCCTTCTGTGACACCGTCACGTCATCAGGTGGTCGCCCTCGCCTACGATGG
CCTGTGCACCTTTGAGTTTGGCGTAGCCGTGGAGATCTTCGGCCTGCCGCGCCCGGAAATGGGCGACAACTGGTACCAGT
TCGCCGTCGCCGCCGTCGATGAAGGGCCGCTGTGCGCCACCGGCGGCATCCGCCTGATGACCGACGGCGGTCCTGAACTT
CTCGCCCAGGCGGATACGATTGTGATCCCCGGCTGGCGCGGCGTCGACGCCCCGGTCCCCGAGGCGCTGTGCGCCGCGCT
GGCTTCCGCCCACGCCCGCGGATGTCGGATTATTTCTATCTGTTCCGGGGTGTTCGTTCTCGCCGCCGCCGGGCTGCTCA
ATGGCCGCCAGGCGACAACCCACTGGCGCTACACCGCGGCGCTGCAGTCCCGTTTTCCGCAGATCCAGGTGGTGGAGGAC
GTCCTTTACGTGGGCGATGCTTTGCTGATGACTTCCGCCGGCAGCGCGGCGGGGATCGACCTTTGTCTGCATCTGGTGCG
TGAAGATTTCGGCAGCGAAGCCGCCAACGTCGTCGCCCGCCGCCTGGTCGTCTCTCCCCATCGCGACGGCGGTCAGGCGC
AGCATGTCCTGCGCCCGGTAGCCCGCAGCCGGGAGAGCCTGCGCCTCGGTCAGCTGTTTGACTATCTGCACCAGCATCTT
GCCGCCAGCCATACCGTCGCTTCCCTCGCCCAGCGCGCCGGCATGGGGACGCGCACCTTTTTGCGCCGCTTTGAGGAGGC
CACCGGTAAAACGCCCGCCCGCTGGCTGCTGGAGGAACGACTGCTGCGCGCCCGCCAGCACCTGACGGAGAGCACGATGG
GCATCGATCAGATCGCTGAGCGCTGCGGGTTTGCCAGCGCCGGCACCCTGCGCCACCATTTTCGCCAGCACTTCGCGCTC
AGCCCGCTGCAGTACCGTAAACAGTTTACGCCTTCTCCGATTGCAAAATCGTCGCAGCCACGGACAATAGACGGCCACAG
TAAACCGGTCGCCAGGAGGGTCGATGATGAAGAAAGAGTGTCGGGTAGTGATCTATAA

Upstream 100 bases:

>100_bases
GGTGGCAGGGGGAAATTGGGTTACTACACTCATGGCGTCTTCTCCTTGTCTGTGATAACACTACTTTACTGACGCCCATC
ACCTTGATCTGCCGACAACC

Downstream 100 bases:

>100_bases
AGAGGGGCTGCTGGGCAGTCTGTTTTTTGGCGAAGCCAAGGCCGACCCTGACAAAATGAGCCAGTTTCTCAGCAGCTATA
CCCGTGAGGGATGGGAAGTG

Product: transcriptional activator FtrA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 364

Protein sequence:

>365_residues
MTENANILTTPSVTPSRHQVVALAYDGLCTFEFGVAVEIFGLPRPEMGDNWYQFAVAAVDEGPLCATGGIRLMTDGGPEL
LAQADTIVIPGWRGVDAPVPEALCAALASAHARGCRIISICSGVFVLAAAGLLNGRQATTHWRYTAALQSRFPQIQVVED
VLYVGDALLMTSAGSAAGIDLCLHLVREDFGSEAANVVARRLVVSPHRDGGQAQHVLRPVARSRESLRLGQLFDYLHQHL
AASHTVASLAQRAGMGTRTFLRRFEEATGKTPARWLLEERLLRARQHLTESTMGIDQIAERCGFASAGTLRHHFRQHFAL
SPLQYRKQFTPSPIAKSSQPRTIDGHSKPVARRVDDEERVSGSDL

Sequences:

>Translated_365_residues
MTENANILTTPSVTPSRHQVVALAYDGLCTFEFGVAVEIFGLPRPEMGDNWYQFAVAAVDEGPLCATGGIRLMTDGGPEL
LAQADTIVIPGWRGVDAPVPEALCAALASAHARGCRIISICSGVFVLAAAGLLNGRQATTHWRYTAALQSRFPQIQVVED
VLYVGDALLMTSAGSAAGIDLCLHLVREDFGSEAANVVARRLVVSPHRDGGQAQHVLRPVARSRESLRLGQLFDYLHQHL
AASHTVASLAQRAGMGTRTFLRRFEEATGKTPARWLLEERLLRARQHLTESTMGIDQIAERCGFASAGTLRHHFRQHFAL
SPLQYRKQFTPSPIAKSSQPRTIDGHSKPVARRVDDEERVSGSDL
>Mature_364_residues
TENANILTTPSVTPSRHQVVALAYDGLCTFEFGVAVEIFGLPRPEMGDNWYQFAVAAVDEGPLCATGGIRLMTDGGPELL
AQADTIVIPGWRGVDAPVPEALCAALASAHARGCRIISICSGVFVLAAAGLLNGRQATTHWRYTAALQSRFPQIQVVEDV
LYVGDALLMTSAGSAAGIDLCLHLVREDFGSEAANVVARRLVVSPHRDGGQAQHVLRPVARSRESLRLGQLFDYLHQHLA
ASHTVASLAQRAGMGTRTFLRRFEEATGKTPARWLLEERLLRARQHLTESTMGIDQIAERCGFASAGTLRHHFRQHFALS
PLQYRKQFTPSPIAKSSQPRTIDGHSKPVARRVDDEERVSGSDL

Specific function: Positive Activator Of Genes Required For L-Rhamnose Utilization, Probably Of The Rhamnose Transporter Gene (Rhat). [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 39703; Mature: 39571

Theoretical pI: Translated: 7.88; Mature: 7.88

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTENANILTTPSVTPSRHQVVALAYDGLCTFEFGVAVEIFGLPRPEMGDNWYQFAVAAVD
CCCCCCEEECCCCCCCCCEEEEEEECCEEEEECCCEEEEECCCCCCCCCCHHEEEEEEEC
EGPLCATGGIRLMTDGGPELLAQADTIVIPGWRGVDAPVPEALCAALASAHARGCRIISI
CCCEEECCCEEEEECCCHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCHHHH
CSGVFVLAAAGLLNGRQATTHWRYTAALQSRFPQIQVVEDVLYVGDALLMTSAGSAAGID
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHCCCCCHHHHH
LCLHLVREDFGSEAANVVARRLVVSPHRDGGQAQHVLRPVARSRESLRLGQLFDYLHQHL
HHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AASHTVASLAQRAGMGTRTFLRRFEEATGKTPARWLLEERLLRARQHLTESTMGIDQIAE
HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
RCGFASAGTLRHHFRQHFALSPLQYRKQFTPSPIAKSSQPRTIDGHSKPVARRVDDEERV
HCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCEECCCCCCHHHHCCHHHCC
SGSDL
CCCCC
>Mature Secondary Structure 
TENANILTTPSVTPSRHQVVALAYDGLCTFEFGVAVEIFGLPRPEMGDNWYQFAVAAVD
CCCCCEEECCCCCCCCCEEEEEEECCEEEEECCCEEEEECCCCCCCCCCHHEEEEEEEC
EGPLCATGGIRLMTDGGPELLAQADTIVIPGWRGVDAPVPEALCAALASAHARGCRIISI
CCCEEECCCEEEEECCCHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCHHHH
CSGVFVLAAAGLLNGRQATTHWRYTAALQSRFPQIQVVEDVLYVGDALLMTSAGSAAGID
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHCCCCCHHHHH
LCLHLVREDFGSEAANVVARRLVVSPHRDGGQAQHVLRPVARSRESLRLGQLFDYLHQHL
HHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AASHTVASLAQRAGMGTRTFLRRFEEATGKTPARWLLEERLLRARQHLTESTMGIDQIAE
HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
RCGFASAGTLRHHFRQHFALSPLQYRKQFTPSPIAKSSQPRTIDGHSKPVARRVDDEERV
HCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCEECCCCCCHHHHCCHHHCC
SGSDL
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]