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The map label for this gene is ydeJ [H]

Identifier: 238894622

GI number: 238894622

Start: 2514389

End: 2514901

Strand: Direct

Name: ydeJ [H]

Synonym: KP1_2623

Alternate gene names: 238894622

Gene position: 2514389-2514901 (Clockwise)

Preceding gene: 238894621

Following gene: 238894624

Centisome position: 47.91

GC content: 62.57

Gene sequence:

>513_bases
ATGACTGACGAGATCGATAGCGACGCAAACAGTACGCATGAACTAACCGCTGAAGTGGCTCGGGCGCTGATCGCGCGCGG
TTGGCGACTGACCACGGCGGAGTCCTGCACCGGAGGGAATCTGGCGGCAGCGCTCTGTGCCCAGGCGGATACCGCGGCAT
TTTATGATACCGGCGTAGTGACCTTCAGCGATGAAGCCAAGCGCAACGTGCTGCAGGTTCGCGCGGAAACCCTGGCGGTA
CACAGCGCCGTCAGCGAAACCTGCGTTCAGGAGATGTCCTCTGGTATTCTGGCGCTCGCCGGGGCCGATATCGCCATCGC
CGTCAGCGGCTACGCCGGACCGGAGGGCGGGGAAGATGGTACCCCCGCCGGCACGGTATGGTTTGCCTGGAATTTTCGCG
GCCAGACTGAAACCAAACGGATGTGCTTTGCCGGCGACTGTGAGACCGTGGTGGCGAAAGCGGTACGATATGCCCTGGCG
GCGCTGAGCGAAAAGCTTGCCCACTGGCAGTGA

Upstream 100 bases:

>100_bases
AAAATATAAATGGCCTCCCGACGACAAAGAAATCGATATGCTATTCTGTTAACAGACGCAGTGAGTCTGCTATTTCTTTC
AATTTCGGCGAGGAGGAAGA

Downstream 100 bases:

>100_bases
CGATGCCCGGGGGCGCGGCCTTACAGGTCCATTGCCTGGCGCGCTACCGGCCAGCAAATCTCCCCGATGCCGTTAAGGCA
GGGTCGGGAAAAGAGAAAGC

Product: competence damage-inducible protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MTDEIDSDANSTHELTAEVARALIARGWRLTTAESCTGGNLAAALCAQADTAAFYDTGVVTFSDEAKRNVLQVRAETLAV
HSAVSETCVQEMSSGILALAGADIAIAVSGYAGPEGGEDGTPAGTVWFAWNFRGQTETKRMCFAGDCETVVAKAVRYALA
ALSEKLAHWQ

Sequences:

>Translated_170_residues
MTDEIDSDANSTHELTAEVARALIARGWRLTTAESCTGGNLAAALCAQADTAAFYDTGVVTFSDEAKRNVLQVRAETLAV
HSAVSETCVQEMSSGILALAGADIAIAVSGYAGPEGGEDGTPAGTVWFAWNFRGQTETKRMCFAGDCETVVAKAVRYALA
ALSEKLAHWQ
>Mature_169_residues
TDEIDSDANSTHELTAEVARALIARGWRLTTAESCTGGNLAAALCAQADTAAFYDTGVVTFSDEAKRNVLQVRAETLAVH
SAVSETCVQEMSSGILALAGADIAIAVSGYAGPEGGEDGTPAGTVWFAWNFRGQTETKRMCFAGDCETVVAKAVRYALAA
LSEKLAHWQ

Specific function: Unknown

COG id: COG1546

COG function: function code R; Uncharacterized protein (competence- and mitomycin-induced)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CinA family [H]

Homologues:

Organism=Escherichia coli, GI1787818, Length=150, Percent_Identity=57.3333333333333, Blast_Score=178, Evalue=1e-46,
Organism=Escherichia coli, GI1789052, Length=154, Percent_Identity=48.0519480519481, Blast_Score=134, Evalue=3e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008136 [H]

Pfam domain/function: PF02464 CinA [H]

EC number: NA

Molecular weight: Translated: 17851; Mature: 17720

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDEIDSDANSTHELTAEVARALIARGWRLTTAESCTGGNLAAALCAQADTAAFYDTGVV
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHCCCCEEECCCEE
TFSDEAKRNVLQVRAETLAVHSAVSETCVQEMSSGILALAGADIAIAVSGYAGPEGGEDG
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEECCCCCCCCCCC
TPAGTVWFAWNFRGQTETKRMCFAGDCETVVAKAVRYALAALSEKLAHWQ
CCCCEEEEEEEECCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TDEIDSDANSTHELTAEVARALIARGWRLTTAESCTGGNLAAALCAQADTAAFYDTGVV
CCCCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHCCCCEEECCCEE
TFSDEAKRNVLQVRAETLAVHSAVSETCVQEMSSGILALAGADIAIAVSGYAGPEGGEDG
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEECCCCCCCCCCC
TPAGTVWFAWNFRGQTETKRMCFAGDCETVVAKAVRYALAALSEKLAHWQ
CCCCEEEEEEEECCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8383113; 9097039; 9278503 [H]