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The map label for this gene is ydgA [H]

Identifier: 238894529

GI number: 238894529

Start: 2425069

End: 2426628

Strand: Reverse

Name: ydgA [H]

Synonym: KP1_2523

Alternate gene names: 238894529

Gene position: 2426628-2425069 (Counterclockwise)

Preceding gene: 238894530

Following gene: 238894527

Centisome position: 46.23

GC content: 61.79

Gene sequence:

>1560_bases
ATGAAAAAATCGCTGGTCGCAGCAGGAGTCATCGTGGCGCTGGGCGTGGTATGGACAGGCGGCGCCTGGTTCACTGGTAA
ACAGCTGGAAGGCCGGATCGCCGATATGGTGCAGCAGGCAAACGCCCAGCTGCGCAGCAGCGCGCCGGAGTCAGGTCTGG
AGCTGAGCTATCAGGACTACCAGCGCGGGCTGTTCAGCAGCCATCTGCAGCTGGTGGTGAAGCCGATCGCCGGTCAGGCT
AACGGCTGGCTGGCCGCCGGGCAGAGCGTGGTGCTTGACGAAGTGGTCGATCATGGCCCCTTCCCGCTGGCCTCGTTAAA
AGCCTTTAATCTGGCGCCGGCAATGGCTTCCGTCCACACCACGCTGGTGAAAAACGACGCCAGCCAGGCGCTGTTCGAGA
TAGCCAAAGGCGACACCCCCTTTACCGTCGATACGCGCATTGCCTACAGCGGCGACAGCCAGTCGGCTATCGTCCTTAAC
GCCCTCGACTACGCTAAAGGCGATGAGAAAGTCACCTTCAGCGGCGGTCAGTTCCAGCTCGACGCCGACCGCGACGGCAA
AAACATCAGCCTGAAGGGCCAGGCCGGCAGCGGGCAGATCGATGCGCTCAACGAATATAATCAGAAGGTACAGCTGCGCT
TCGTCAACCTGACCACCGACGGCGCCACCGAGCTGGCCAGCTTCAACGAACGTATCGGCCAGCAAAAAATGACCCTCGAT
AAACTGGCCATCAGCGTCGAAGGCAAAGAGCTGGCGCTGATCGACGGCATGGCGCTGGACGGCGGCTCGACGCTGACCCA
GGACGGCAAAGGCGTGAACAGCCAGGTGAACTACACCGTCAACAGCCTCAAGCTGCAGGGGCAGGATATGGGCAGCGGCA
AACTCACGCTGAAAGTGGATAACGTCGACGGTCAGGCGTGGCACCAGTTCAGTCAGCAGTACAGCGCGCAGTCTCAGGCG
CTGCTGGCGAAACCGGAGCTGGCGCAGAATCCGGAGCTGTATCAGCAGGCCCTCACCGAAACGCTGTTCAATGCGCTGCC
GATCCTGCTCAAAGGCAACCCGTCGGTGACCATCTCTCCGCTGAGCTGGCGCAATGCCAAAGGCGAAAGCACCCTCAACC
TCTCGGTTCTGCTGAAAGATCCGGCCCAGGTGACCGCTCCGCCGCAGACCCTGGCGGACAGCCTGGATCGCGTGGTGCAG
TCCCTGGACGGCAAAGTGGTGATCCCGGTGGATATGGCGACGGAGTTTATGACTAAGATCGCCGGTCTGGAAGGCTATCA
GCCGGCCGATGCCGCCAAACTCGCCGATCAGCAGGTCAAAGGCCTGGCGGCGATGGGCCAGATGTTCCGCATTACCACCA
TGGAAGATAACGCCATCAGCAGCAGTCTGCAGTACGCGAACGGCCAGGTGACGCTGAACGGACAGAAAATGCCGCTGCAA
GACTTTGCCGCGATGTTTGGTCTGGAAGCGCCTTCGCTGCCGGACAGCGCGCCGCAGGAAGGCCAGCCGCAGCAGGATGA
CGCCGCTCCTCAGCAGGACGACGCCGCCCCGCAGCCGTAA

Upstream 100 bases:

>100_bases
ATAAGCTCCAGTAAGCGACTGCCCCTTCAGGTCGCGCTTACTGTTGGTGATAACTCAGCCAGGCGGTCTCTCCGCCTGGC
TTCATTTATGGATAAATGCT

Downstream 100 bases:

>100_bases
CTTATCGGTACAGGAGACGGCCAGCGCGCGCCGTCTCCCTCATTTTCGCGTCACCAGCCGCGGGGGCATAATCTGGTTTC
GCGTCTCGCCAGTCCCCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 519; Mature: 519

Protein sequence:

>519_residues
MKKSLVAAGVIVALGVVWTGGAWFTGKQLEGRIADMVQQANAQLRSSAPESGLELSYQDYQRGLFSSHLQLVVKPIAGQA
NGWLAAGQSVVLDEVVDHGPFPLASLKAFNLAPAMASVHTTLVKNDASQALFEIAKGDTPFTVDTRIAYSGDSQSAIVLN
ALDYAKGDEKVTFSGGQFQLDADRDGKNISLKGQAGSGQIDALNEYNQKVQLRFVNLTTDGATELASFNERIGQQKMTLD
KLAISVEGKELALIDGMALDGGSTLTQDGKGVNSQVNYTVNSLKLQGQDMGSGKLTLKVDNVDGQAWHQFSQQYSAQSQA
LLAKPELAQNPELYQQALTETLFNALPILLKGNPSVTISPLSWRNAKGESTLNLSVLLKDPAQVTAPPQTLADSLDRVVQ
SLDGKVVIPVDMATEFMTKIAGLEGYQPADAAKLADQQVKGLAAMGQMFRITTMEDNAISSSLQYANGQVTLNGQKMPLQ
DFAAMFGLEAPSLPDSAPQEGQPQQDDAAPQQDDAAPQP

Sequences:

>Translated_519_residues
MKKSLVAAGVIVALGVVWTGGAWFTGKQLEGRIADMVQQANAQLRSSAPESGLELSYQDYQRGLFSSHLQLVVKPIAGQA
NGWLAAGQSVVLDEVVDHGPFPLASLKAFNLAPAMASVHTTLVKNDASQALFEIAKGDTPFTVDTRIAYSGDSQSAIVLN
ALDYAKGDEKVTFSGGQFQLDADRDGKNISLKGQAGSGQIDALNEYNQKVQLRFVNLTTDGATELASFNERIGQQKMTLD
KLAISVEGKELALIDGMALDGGSTLTQDGKGVNSQVNYTVNSLKLQGQDMGSGKLTLKVDNVDGQAWHQFSQQYSAQSQA
LLAKPELAQNPELYQQALTETLFNALPILLKGNPSVTISPLSWRNAKGESTLNLSVLLKDPAQVTAPPQTLADSLDRVVQ
SLDGKVVIPVDMATEFMTKIAGLEGYQPADAAKLADQQVKGLAAMGQMFRITTMEDNAISSSLQYANGQVTLNGQKMPLQ
DFAAMFGLEAPSLPDSAPQEGQPQQDDAAPQQDDAAPQP
>Mature_519_residues
MKKSLVAAGVIVALGVVWTGGAWFTGKQLEGRIADMVQQANAQLRSSAPESGLELSYQDYQRGLFSSHLQLVVKPIAGQA
NGWLAAGQSVVLDEVVDHGPFPLASLKAFNLAPAMASVHTTLVKNDASQALFEIAKGDTPFTVDTRIAYSGDSQSAIVLN
ALDYAKGDEKVTFSGGQFQLDADRDGKNISLKGQAGSGQIDALNEYNQKVQLRFVNLTTDGATELASFNERIGQQKMTLD
KLAISVEGKELALIDGMALDGGSTLTQDGKGVNSQVNYTVNSLKLQGQDMGSGKLTLKVDNVDGQAWHQFSQQYSAQSQA
LLAKPELAQNPELYQQALTETLFNALPILLKGNPSVTISPLSWRNAKGESTLNLSVLLKDPAQVTAPPQTLADSLDRVVQ
SLDGKVVIPVDMATEFMTKIAGLEGYQPADAAKLADQQVKGLAAMGQMFRITTMEDNAISSSLQYANGQVTLNGQKMPLQ
DFAAMFGLEAPSLPDSAPQEGQPQQDDAAPQQDDAAPQP

Specific function: Unknown

COG id: COG5339

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Periplasmic side. Note=Has been isolated in association with the inner membrane, suggesting it may be tethered to the membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yihF and H.influenzae HI_1236 [H]

Homologues:

Organism=Escherichia coli, GI1787900, Length=494, Percent_Identity=65.9919028340081, Blast_Score=700, Evalue=0.0,
Organism=Escherichia coli, GI87082339, Length=486, Percent_Identity=30.4526748971193, Blast_Score=231, Evalue=1e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010352 [H]

Pfam domain/function: PF06097 DUF945 [H]

EC number: NA

Molecular weight: Translated: 55269; Mature: 55269

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSLVAAGVIVALGVVWTGGAWFTGKQLEGRIADMVQQANAQLRSSAPESGLELSYQDY
CCCHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEECHHHH
QRGLFSSHLQLVVKPIAGQANGWLAAGQSVVLDEVVDHGPFPLASLKAFNLAPAMASVHT
HHHHHHHHHHHEEECCCCCCCCEECCCCHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHH
TLVKNDASQALFEIAKGDTPFTVDTRIAYSGDSQSAIVLNALDYAKGDEKVTFSGGQFQL
HHHHCCHHHHHHHHHCCCCCEEEEEEEEECCCCCCEEEEEEHHCCCCCCEEEECCCEEEE
DADRDGKNISLKGQAGSGQIDALNEYNQKVQLRFVNLTTDGATELASFNERIGQQKMTLD
ECCCCCCEEEEECCCCCCCCCCHHHCCCEEEEEEEEEECCCHHHHHHHHHHHCHHHHHHH
KLAISVEGKELALIDGMALDGGSTLTQDGKGVNSQVNYTVNSLKLQGQDMGSGKLTLKVD
HEEEEECCCEEEEEECEEECCCCEECCCCCCCCCEEEEEEEEEEEECCCCCCCEEEEEEE
NVDGQAWHQFSQQYSAQSQALLAKPELAQNPELYQQALTETLFNALPILLKGNPSVTISP
CCCCHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCEEEEC
LSWRNAKGESTLNLSVLLKDPAQVTAPPQTLADSLDRVVQSLDGKVVIPVDMATEFMTKI
CCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHH
AGLEGYQPADAAKLADQQVKGLAAMGQMFRITTMEDNAISSSLQYANGQVTLNGQKMPLQ
HCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHCCCCEEEECCCCCCHH
DFAAMFGLEAPSLPDSAPQEGQPQQDDAAPQQDDAAPQP
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKSLVAAGVIVALGVVWTGGAWFTGKQLEGRIADMVQQANAQLRSSAPESGLELSYQDY
CCCHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEECHHHH
QRGLFSSHLQLVVKPIAGQANGWLAAGQSVVLDEVVDHGPFPLASLKAFNLAPAMASVHT
HHHHHHHHHHHEEECCCCCCCCEECCCCHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHH
TLVKNDASQALFEIAKGDTPFTVDTRIAYSGDSQSAIVLNALDYAKGDEKVTFSGGQFQL
HHHHCCHHHHHHHHHCCCCCEEEEEEEEECCCCCCEEEEEEHHCCCCCCEEEECCCEEEE
DADRDGKNISLKGQAGSGQIDALNEYNQKVQLRFVNLTTDGATELASFNERIGQQKMTLD
ECCCCCCEEEEECCCCCCCCCCHHHCCCEEEEEEEEEECCCHHHHHHHHHHHCHHHHHHH
KLAISVEGKELALIDGMALDGGSTLTQDGKGVNSQVNYTVNSLKLQGQDMGSGKLTLKVD
HEEEEECCCEEEEEECEEECCCCEECCCCCCCCCEEEEEEEEEEEECCCCCCCEEEEEEE
NVDGQAWHQFSQQYSAQSQALLAKPELAQNPELYQQALTETLFNALPILLKGNPSVTISP
CCCCHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCEEEEC
LSWRNAKGESTLNLSVLLKDPAQVTAPPQTLADSLDRVVQSLDGKVVIPVDMATEFMTKI
CCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHH
AGLEGYQPADAAKLADQQVKGLAAMGQMFRITTMEDNAISSSLQYANGQVTLNGQKMPLQ
HCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHCCCCEEEECCCCCCHH
DFAAMFGLEAPSLPDSAPQEGQPQQDDAAPQQDDAAPQP
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]