Click here to switch to the map view.

The map label for this gene is yedE [H]

Identifier: 238894521

GI number: 238894521

Start: 2417004

End: 2418269

Strand: Reverse

Name: yedE [H]

Synonym: KP1_2514

Alternate gene names: 238894521

Gene position: 2418269-2417004 (Counterclockwise)

Preceding gene: 238894522

Following gene: 238894520

Centisome position: 46.08

GC content: 62.32

Gene sequence:

>1266_bases
TTGCCCCCTTTGGTCGGTCATCGACCGTTAATACCTTCTGAGTTCAGAGGCATTTTTATGACATGGCAATCCTTCAAACA
GGCCTGGCTTATCCGGTTCTGGTCTCCTGTCCCGGCGGTCATTGCCGCGGGCATTCTCTCTACCTACTATTTTGGCATCA
CCGGCACCTTCTGGGCGGTGACCGGCGAATTCACCCGCTGGGGTGGTCAGCTGCTGCAGCTGCTGGGCGTCCACAGCGAA
CAGTGGGGCTATTACCAGCTGATACATCTCGAAGGGTCGCCGCTGACCCGCATCGATGGCAGGATGATCATCGGCATGTT
CGGCGGCTGCCTGGCCGCCGCGCTGTGGGCGAATAACGTCAAACTGCGCCTGCCACGCAGCCGGATCCGCATTGCGCAGG
CCGTGGCGGGCGGCATCATCGCCGGGTTCGGCGCACGGCTGGCGATGGGCTGCAACCTGGCGGCCTTCTTCACCGGCATT
CCGCAGTTCTCCCTGCACGCCTGGCTGTTTGCCATCGCCACCGCCATCGGCTCCTGGTTTGGCGCCCGCTTCACGCTGCT
GCCCCTTTTTCGCATCCCGGTAAAAATGCAAAAAGTGTCCGCCGCCTCGCCCTTAACCCAAAAACCGCAGCAGGCGCGCC
GCCGTTTCCGCCAGGGGATGGTGGTCTTTTTCGCCATGATCGGCTGGGGCCTGCTCACCGCCGCAGACCACCCGGCGCTC
GGCCTGGCGATGCTGTTTGGCATTGCCTTTGGCCTGCTTATTGAGCGCGCGCAGATCTGCTTTACCTCCGCCTTTCGCGA
TATGTGGATCACCGGCCGGACGGTGATGGCGAAGGCGATTATCTTCGGCATGGCGGCGAGCGCCATCGGTATCTTCAGCT
ATGTGCAATTGGGGATGGCGCCGAAAATTATGTGGGCCGGTCCTAATGCGGCGATTGGCGGGCTACTATTTGGCTTTGGC
ATCGTGCTGGCCGGCGGCTGTGAGACCGGCTGGATGTACCGGGCGGTGGAGGGCCAGGTTCACTACTGGTGGGTTGGGCT
GGGCAACGTCATCGGCTCAACGCTGCTCGCCTGGTGCTGGGACGATATCGCCGCCCCGCTCGCCACCCACTGGCAGAAAG
TCAACCTGCTGAACGCCTTCGGTCCCTTTGGCGGACTACTGGCCACCTATCTACTGCTGCTGATCGCCCTGCTGCTGGTG
ATCGCCTGGGAGAGACATTTTTTCCGCCGCCAGGCGGCGGTCCGGACCGTGAAGGAGAGCGCATGA

Upstream 100 bases:

>100_bases
ATTCAGGCGCTGCCCGCGCTGCTGGCGCTGGTTGCCGTGCTGACGCAAGCGTAGGGCCTTGATCCAAAACAGAGAAAGCA
GGCGCTAAGGCGGGTACTAT

Downstream 100 bases:

>100_bases
AAAACATCATCCCTGATTATCGCCTGGATATGGTCGGCGAACCCTGCCCGTATCCGGCGGTCGCTACCCTGGAGGCAATG
CCTTCCCTGCAAAAAGGCGA

Product: putative inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 420

Protein sequence:

>421_residues
MPPLVGHRPLIPSEFRGIFMTWQSFKQAWLIRFWSPVPAVIAAGILSTYYFGITGTFWAVTGEFTRWGGQLLQLLGVHSE
QWGYYQLIHLEGSPLTRIDGRMIIGMFGGCLAAALWANNVKLRLPRSRIRIAQAVAGGIIAGFGARLAMGCNLAAFFTGI
PQFSLHAWLFAIATAIGSWFGARFTLLPLFRIPVKMQKVSAASPLTQKPQQARRRFRQGMVVFFAMIGWGLLTAADHPAL
GLAMLFGIAFGLLIERAQICFTSAFRDMWITGRTVMAKAIIFGMAASAIGIFSYVQLGMAPKIMWAGPNAAIGGLLFGFG
IVLAGGCETGWMYRAVEGQVHYWWVGLGNVIGSTLLAWCWDDIAAPLATHWQKVNLLNAFGPFGGLLATYLLLLIALLLV
IAWERHFFRRQAAVRTVKESA

Sequences:

>Translated_421_residues
MPPLVGHRPLIPSEFRGIFMTWQSFKQAWLIRFWSPVPAVIAAGILSTYYFGITGTFWAVTGEFTRWGGQLLQLLGVHSE
QWGYYQLIHLEGSPLTRIDGRMIIGMFGGCLAAALWANNVKLRLPRSRIRIAQAVAGGIIAGFGARLAMGCNLAAFFTGI
PQFSLHAWLFAIATAIGSWFGARFTLLPLFRIPVKMQKVSAASPLTQKPQQARRRFRQGMVVFFAMIGWGLLTAADHPAL
GLAMLFGIAFGLLIERAQICFTSAFRDMWITGRTVMAKAIIFGMAASAIGIFSYVQLGMAPKIMWAGPNAAIGGLLFGFG
IVLAGGCETGWMYRAVEGQVHYWWVGLGNVIGSTLLAWCWDDIAAPLATHWQKVNLLNAFGPFGGLLATYLLLLIALLLV
IAWERHFFRRQAAVRTVKESA
>Mature_420_residues
PPLVGHRPLIPSEFRGIFMTWQSFKQAWLIRFWSPVPAVIAAGILSTYYFGITGTFWAVTGEFTRWGGQLLQLLGVHSEQ
WGYYQLIHLEGSPLTRIDGRMIIGMFGGCLAAALWANNVKLRLPRSRIRIAQAVAGGIIAGFGARLAMGCNLAAFFTGIP
QFSLHAWLFAIATAIGSWFGARFTLLPLFRIPVKMQKVSAASPLTQKPQQARRRFRQGMVVFFAMIGWGLLTAADHPALG
LAMLFGIAFGLLIERAQICFTSAFRDMWITGRTVMAKAIIFGMAASAIGIFSYVQLGMAPKIMWAGPNAAIGGLLFGFGI
VLAGGCETGWMYRAVEGQVHYWWVGLGNVIGSTLLAWCWDDIAAPLATHWQKVNLLNAFGPFGGLLATYLLLLIALLLVI
AWERHFFRRQAAVRTVKESA

Specific function: Unknown

COG id: COG2391

COG function: function code R; Predicted transporter component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0394 family [H]

Homologues:

Organism=Escherichia coli, GI1788238, Length=402, Percent_Identity=84.0796019900498, Blast_Score=661, Evalue=0.0,
Organism=Escherichia coli, GI1788323, Length=102, Percent_Identity=38.2352941176471, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007272 [H]

Pfam domain/function: PF04143 DUF395 [H]

EC number: NA

Molecular weight: Translated: 46291; Mature: 46159

Theoretical pI: Translated: 11.07; Mature: 11.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPLVGHRPLIPSEFRGIFMTWQSFKQAWLIRFWSPVPAVIAAGILSTYYFGITGTFWAV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEE
TGEFTRWGGQLLQLLGVHSEQWGYYQLIHLEGSPLTRIDGRMIIGMFGGCLAAALWANNV
ECHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCEECCEEHHHHHHHHHHHHHHHCCC
KLRLPRSRIRIAQAVAGGIIAGFGARLAMGCNLAAFFTGIPQFSLHAWLFAIATAIGSWF
EEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHH
GARFTLLPLFRIPVKMQKVSAASPLTQKPQQARRRFRQGMVVFFAMIGWGLLTAADHPAL
CCHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
GLAMLFGIAFGLLIERAQICFTSAFRDMWITGRTVMAKAIIFGMAASAIGIFSYVQLGMA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PKIMWAGPNAAIGGLLFGFGIVLAGGCETGWMYRAVEGQVHYWWVGLGNVIGSTLLAWCW
CEEEECCCCHHHHHHHHHHHHHEECCCCCCCEEEEECCCEEEEEEEHHHHHHHHHHHHHH
DDIAAPLATHWQKVNLLNAFGPFGGLLATYLLLLIALLLVIAWERHFFRRQAAVRTVKES
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
A
C
>Mature Secondary Structure 
PPLVGHRPLIPSEFRGIFMTWQSFKQAWLIRFWSPVPAVIAAGILSTYYFGITGTFWAV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEE
TGEFTRWGGQLLQLLGVHSEQWGYYQLIHLEGSPLTRIDGRMIIGMFGGCLAAALWANNV
ECHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCEECCEEHHHHHHHHHHHHHHHCCC
KLRLPRSRIRIAQAVAGGIIAGFGARLAMGCNLAAFFTGIPQFSLHAWLFAIATAIGSWF
EEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHH
GARFTLLPLFRIPVKMQKVSAASPLTQKPQQARRRFRQGMVVFFAMIGWGLLTAADHPAL
CCHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
GLAMLFGIAFGLLIERAQICFTSAFRDMWITGRTVMAKAIIFGMAASAIGIFSYVQLGMA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PKIMWAGPNAAIGGLLFGFGIVLAGGCETGWMYRAVEGQVHYWWVGLGNVIGSTLLAWCW
CEEEECCCCHHHHHHHHHHHHHEECCCCCCCEEEEECCCEEEEEEEHHHHHHHHHHHHHH
DDIAAPLATHWQKVNLLNAFGPFGGLLATYLLLLIALLLVIAWERHFFRRQAAVRTVKES
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
A
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8371104; 9097040; 9278503 [H]