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The map label for this gene is ydcF [H]

Identifier: 238894514

GI number: 238894514

Start: 2412171

End: 2412971

Strand: Direct

Name: ydcF [H]

Synonym: KP1_2507

Alternate gene names: 238894514

Gene position: 2412171-2412971 (Clockwise)

Preceding gene: 238894512

Following gene: 238894516

Centisome position: 45.96

GC content: 68.79

Gene sequence:

>801_bases
ATGGCAGAACAATTTCCTCCGCTGTCGGCAGCGACGCTGGCGGCGGCTAACCAGGTCGGCGCCTGGCTGGCGCAGGACGA
TCTGGCGACGCTGCCCGCGCTGCCGCAGGTGGACGTGGTAGTGCTGGCCGGCAACGCCGTGATCCCAACCATCGACGCCG
CCTGCCGTCTGGCGGCGGCGCAGGCGGTCCCGCTGCTGATCAGCGGCGGCGTGGGACATTCTACGGGCTATCTCTACGAG
GCGGTGCGCCAGGATCCCCGTTACCGTACATTGCCGGTGGATGGCCGCCCGGAAGCGCATGTTCTGGCCGACATTGCTCA
TGACTACTGGCACATCCCCCATTCGCGGCTGGTGGTGGAGGACCAGTCAACCAACTGCGGTGAGAACGCCCGTTTTACCC
GGACCACGCTGGAGAGCCGGGGGCTCGCCCATCGTCGCGGGATCGTCATTCAGGACCCGACTATGCAGCGGCGAACCATG
GCTACCTTCGCCCGCGTCTGGCAGGGGGCGACGACGCCGCCGCAGTGGTTGAGCTTTCCCGGCTGCTCGCCGGTGCTGGA
GCAGACCGATGGCCAACTGGGGTTCGCGGGCGGCGGAGCGGGGCTCTGGCCGGTCACCCGCTACCTGGGGCTGCTGCTGG
GCGAGCTGCCGCGCCTGCAGAATACCCCTGAAGGGTACGGCCCGCGGGGAAAAGACTTCATCAGCCATGTCACCTTCCCG
CCGGAGATCCTCGACGCCTGGCGACAGCTGCGGGAGGACGCCCAGCTTGCCGGGGCGCTGCAGGCCCGCACCCTCGGCTG
A

Upstream 100 bases:

>100_bases
AAATGGTTACAAATCGACGCCGCTATGCCTCCCGGCAGGCGGCGTTTATGATAGCGAAAGCATCCTCTCCGCTCGGCTGA
GAGAGGATTAAGGAGACAGA

Downstream 100 bases:

>100_bases
AAAATGCCCGTTTACGGCAGATTCGTCGCAAACGGGCAATTTGTGTTATTAAAATGTAACCTCAAGCGGGCATTTTTGGC
CCGTTTTTATGAATCAGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MAEQFPPLSAATLAAANQVGAWLAQDDLATLPALPQVDVVVLAGNAVIPTIDAACRLAAAQAVPLLISGGVGHSTGYLYE
AVRQDPRYRTLPVDGRPEAHVLADIAHDYWHIPHSRLVVEDQSTNCGENARFTRTTLESRGLAHRRGIVIQDPTMQRRTM
ATFARVWQGATTPPQWLSFPGCSPVLEQTDGQLGFAGGGAGLWPVTRYLGLLLGELPRLQNTPEGYGPRGKDFISHVTFP
PEILDAWRQLREDAQLAGALQARTLG

Sequences:

>Translated_266_residues
MAEQFPPLSAATLAAANQVGAWLAQDDLATLPALPQVDVVVLAGNAVIPTIDAACRLAAAQAVPLLISGGVGHSTGYLYE
AVRQDPRYRTLPVDGRPEAHVLADIAHDYWHIPHSRLVVEDQSTNCGENARFTRTTLESRGLAHRRGIVIQDPTMQRRTM
ATFARVWQGATTPPQWLSFPGCSPVLEQTDGQLGFAGGGAGLWPVTRYLGLLLGELPRLQNTPEGYGPRGKDFISHVTFP
PEILDAWRQLREDAQLAGALQARTLG
>Mature_265_residues
AEQFPPLSAATLAAANQVGAWLAQDDLATLPALPQVDVVVLAGNAVIPTIDAACRLAAAQAVPLLISGGVGHSTGYLYEA
VRQDPRYRTLPVDGRPEAHVLADIAHDYWHIPHSRLVVEDQSTNCGENARFTRTTLESRGLAHRRGIVIQDPTMQRRTMA
TFARVWQGATTPPQWLSFPGCSPVLEQTDGQLGFAGGGAGLWPVTRYLGLLLGELPRLQNTPEGYGPRGKDFISHVTFPP
EILDAWRQLREDAQLAGALQARTLG

Specific function: Binds S-adenosyl-L-methionine (AdoMet) [H]

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To S.coelicolor SCO4629 [H]

Homologues:

Organism=Escherichia coli, GI1787683, Length=262, Percent_Identity=55.3435114503817, Blast_Score=295, Evalue=3e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003848
- InterPro:   IPR014729 [H]

Pfam domain/function: PF02698 DUF218 [H]

EC number: NA

Molecular weight: Translated: 28738; Mature: 28607

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEQFPPLSAATLAAANQVGAWLAQDDLATLPALPQVDVVVLAGNAVIPTIDAACRLAAA
CCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEEEECCEECCCHHHHHHHHHH
QAVPLLISGGVGHSTGYLYEAVRQDPRYRTLPVDGRPEAHVLADIAHDYWHIPHSRLVVE
HHCCEEEECCCCCCHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEE
DQSTNCGENARFTRTTLESRGLAHRRGIVIQDPTMQRRTMATFARVWQGATTPPQWLSFP
CCCCCCCCCCCCHHHHHHHCCCHHHCCEEEECCCHHHHHHHHHHHHHCCCCCCHHHCCCC
GCSPVLEQTDGQLGFAGGGAGLWPVTRYLGLLLGELPRLQNTPEGYGPRGKDFISHVTFP
CCCHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCC
PEILDAWRQLREDAQLAGALQARTLG
HHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AEQFPPLSAATLAAANQVGAWLAQDDLATLPALPQVDVVVLAGNAVIPTIDAACRLAAA
CCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEEEECCEECCCHHHHHHHHHH
QAVPLLISGGVGHSTGYLYEAVRQDPRYRTLPVDGRPEAHVLADIAHDYWHIPHSRLVVE
HHCCEEEECCCCCCHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEE
DQSTNCGENARFTRTTLESRGLAHRRGIVIQDPTMQRRTMATFARVWQGATTPPQWLSFP
CCCCCCCCCCCCHHHHHHHCCCHHHCCEEEECCCHHHHHHHHHHHHHCCCCCCHHHCCCC
GCSPVLEQTDGQLGFAGGGAGLWPVTRYLGLLLGELPRLQNTPEGYGPRGKDFISHVTFP
CCCHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCC
PEILDAWRQLREDAQLAGALQARTLG
HHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 10493123 [H]