Click here to switch to the map view.

The map label for this gene is uspF [H]

Identifier: 238894462

GI number: 238894462

Start: 2355128

End: 2355562

Strand: Reverse

Name: uspF [H]

Synonym: KP1_2452

Alternate gene names: 238894462

Gene position: 2355562-2355128 (Counterclockwise)

Preceding gene: 238894463

Following gene: 238894461

Centisome position: 44.88

GC content: 54.25

Gene sequence:

>435_bases
ATGAGCAGAATGATTCTTGTCCCTATCGATATCTCTGATAAAGAATTTACTGAACGCATTATCAGTCACGTTGAATCGGA
AGCGCGGATTGACGACGCCGAGGTGCATTTCCTCACCGTGATCCCTTCTCTGCCCTATTATGCCTCACTGGGAATGGCCT
ATACCGCTGAGCTTCCCGGCATGGACGAGCTGCGTGAGGGTTCTGAAACGCAATTGAAAGAGATCGCGAAGCAGTTCTCC
ATCCCGGAAGACCGGATGCATTTTCACGTCGCGGAAGGATCGCCAAAAGATAAAATCCTTGCGCTGGCCAAGTCGCTGCC
AGCCGACCTGGTGATCATCGCTTCGCACCGGCCGGATATCACAACTTATCTGCTGGGCTCCAACGCCGCCGCGGTGGTTC
GTCACGCCGAGTGCTCGGTACTGGTGGTCCGCTAA

Upstream 100 bases:

>100_bases
CGAACGCAAGCTACGTTAATGTCAAAGTGTGACTGCGGTCATGATACAAAACGTGCCCTAATACCGTACAATATGAAGGG
ATACTAAAACAGGAGGTTTT

Downstream 100 bases:

>100_bases
CGCCGCAGCCCGCCGCCCGGCGGGCTTTTTATTTCCGCATCAGCCGCCCCCGCCTGGATGCTCGCTGCCGAAAGTGCCGG
AAAGATGCTGACATTCCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MSRMILVPIDISDKEFTERIISHVESEARIDDAEVHFLTVIPSLPYYASLGMAYTAELPGMDELREGSETQLKEIAKQFS
IPEDRMHFHVAEGSPKDKILALAKSLPADLVIIASHRPDITTYLLGSNAAAVVRHAECSVLVVR

Sequences:

>Translated_144_residues
MSRMILVPIDISDKEFTERIISHVESEARIDDAEVHFLTVIPSLPYYASLGMAYTAELPGMDELREGSETQLKEIAKQFS
IPEDRMHFHVAEGSPKDKILALAKSLPADLVIIASHRPDITTYLLGSNAAAVVRHAECSVLVVR
>Mature_143_residues
SRMILVPIDISDKEFTERIISHVESEARIDDAEVHFLTVIPSLPYYASLGMAYTAELPGMDELREGSETQLKEIAKQFSI
PEDRMHFHVAEGSPKDKILALAKSLPADLVIIASHRPDITTYLLGSNAAAVVRHAECSVLVVR

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

Organism=Escherichia coli, GI87081893, Length=144, Percent_Identity=76.3888888888889, Blast_Score=234, Evalue=2e-63,
Organism=Escherichia coli, GI1786824, Length=146, Percent_Identity=38.3561643835616, Blast_Score=94, Evalue=3e-21,

Paralogues:

None

Copy number: 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006015
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 15958; Mature: 15826

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRMILVPIDISDKEFTERIISHVESEARIDDAEVHFLTVIPSLPYYASLGMAYTAELPG
CCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHCCEEEEECCCC
MDELREGSETQLKEIAKQFSIPEDRMHFHVAEGSPKDKILALAKSLPADLVIIASHRPDI
HHHHHCCCHHHHHHHHHHHCCCCHHEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCCCE
TTYLLGSNAAAVVRHAECSVLVVR
EEEEECCCCEEEEEECCEEEEEEC
>Mature Secondary Structure 
SRMILVPIDISDKEFTERIISHVESEARIDDAEVHFLTVIPSLPYYASLGMAYTAELPG
CCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHCCEEEEECCCC
MDELREGSETQLKEIAKQFSIPEDRMHFHVAEGSPKDKILALAKSLPADLVIIASHRPDI
HHHHHCCCHHHHHHHHHHHCCCCHHEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCCCE
TTYLLGSNAAAVVRHAECSVLVVR
EEEEECCCCEEEEEECCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]