| Definition | Klebsiella pneumoniae NTUH-K2044 chromosome, complete genome. |
|---|---|
| Accession | NC_012731 |
| Length | 5,248,520 |
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The map label for this gene is dbpA [H]
Identifier: 238894460
GI number: 238894460
Start: 2352540
End: 2353913
Strand: Direct
Name: dbpA [H]
Synonym: KP1_2450
Alternate gene names: 238894460
Gene position: 2352540-2353913 (Clockwise)
Preceding gene: 238894459
Following gene: 238894466
Centisome position: 44.82
GC content: 62.59
Gene sequence:
>1374_bases GTGACCGCTTTTTCTACCCTGACTGTTTTACCTGCCGCCCAATTAGCCAACCTTAACGAGCTGGGTTATCTGTCGATGAC CCCGGTTCAGGCCGCCGCCCTGCCGGCGATCCTCGGGAGGAAAGATGTGCGCGTGCAGGCAAAAACCGGCAGCGGAAAAA CGGCCGCATTTGGGCTGGGTCTGCTGCAGCATATCGATCCGGCGCGCTTCGAGACCCAGTCGCTGGTGTTGTGCACGACC CGCGAGCTGGCCGATCAGGTCGCCGGCGAGCTGCGCCGCCTGGCGCGCTGCCTGCCGAACATCAAGATTCTGATGCTCTG CGGCGGGCAGCCCTTTGGCGCCCAGCGAGATTCCCTGCAGCATGCCCCGCATATTATCGTCGCCACCCCGGGCCGTCTGC TCGATCATCTGCAGAAGGGAACGGTCTCCCTTGACGCGCTGCAGACCCTGGTGATGGACGAAGCGGACCGCATGCTCGAT ATGGGCTTTAGCGATGCCATTGATGAGGTGATCCGCTTCGCACCGGCTGACCGGCAGACGCTGCTGTTTTCTGCTACCTG GCCGGCGGCAATCGCGGCGATCAGCGGCCGGGTGCAGCGCAATCCGCAGACCATTGAGATCGACACTGTCGACGCGCTCC CGGCGATTGAACAGCAGTTCTTTGAGGTTTCCCGCCACGGTAAGATTGCCCTGCTGCAGCGCCTGCTCAGCCAGCATCAG CCCGCATCCTGCGTGGTGTTCTGCAATACCAAACGCGATTGCCAGGCGGTCTGCGATGCGCTCAACGCCGCCGGGCAGAG CGCCTTGTCGCTGCATGGTGACCTTGAGCAGCGCGATCGCGATCAGACGCTGGTGCGCTTCGCTAACGGCAGCGTCCGGG TTCTGGTGGCGACCGACGTCGCTGCCCGCGGTCTGGACATCAAATCCCTGGCGCTGGTGGTGAATTTCGAGCTGGCCTGG GATCCGGAGGTGCATGTTCACCGCATCGGCCGTACCGCCCGCGCCGGTGAACAAGGGCTGGCCATCAGCTTCTGTGCGCC GGAAGAGGCGCAGCGCGCCACTATTCTGGCCGACATGCTGCAGCTTTCCCTGAACTGGCTGCCGGCGCCGACGGGCAACA CCATCGCGCCGCTGACGGCGGAGATGGCGACGCTGTGTATCGACGGCGGGAAAAAGGCGAAAATGCGCCCGGGAGATGTG CTGGGAGCCCTGACCGGGGATATGGGCTTTGATGGTGCCGATATCGGCAAAATTACCGTCCACCCGGCCCACGTCTATGT GGCGATCCGCCAGAATATGGCGCAGAAGGCGTATAAGCAGTTACAAAATGGCAAGATCAAAGGTAAATCCTGCCGCGTAC GACTGCTGAAGTAA
Upstream 100 bases:
>100_bases CGCCGCCTGACGAAGAGCCGATTAAATTGTCGCATCAGGCGCGGAGATCTGCGAGGATACGCGCCTGCAGATTGTCTGCC TTTTAATACGAGAATACATT
Downstream 100 bases:
>100_bases GGGCAGGAGAGTGCGTCTCAGGCGGCTGCCTGAGACGCGTGAGGGTTATTTCACTTCCACTACGTTCAGACGCAGCTCAT CGAGACGGGCGTCTTCTTCT
Product: ATP-dependent RNA helicase DbpA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 457; Mature: 456
Protein sequence:
>457_residues MTAFSTLTVLPAAQLANLNELGYLSMTPVQAAALPAILGRKDVRVQAKTGSGKTAAFGLGLLQHIDPARFETQSLVLCTT RELADQVAGELRRLARCLPNIKILMLCGGQPFGAQRDSLQHAPHIIVATPGRLLDHLQKGTVSLDALQTLVMDEADRMLD MGFSDAIDEVIRFAPADRQTLLFSATWPAAIAAISGRVQRNPQTIEIDTVDALPAIEQQFFEVSRHGKIALLQRLLSQHQ PASCVVFCNTKRDCQAVCDALNAAGQSALSLHGDLEQRDRDQTLVRFANGSVRVLVATDVAARGLDIKSLALVVNFELAW DPEVHVHRIGRTARAGEQGLAISFCAPEEAQRATILADMLQLSLNWLPAPTGNTIAPLTAEMATLCIDGGKKAKMRPGDV LGALTGDMGFDGADIGKITVHPAHVYVAIRQNMAQKAYKQLQNGKIKGKSCRVRLLK
Sequences:
>Translated_457_residues MTAFSTLTVLPAAQLANLNELGYLSMTPVQAAALPAILGRKDVRVQAKTGSGKTAAFGLGLLQHIDPARFETQSLVLCTT RELADQVAGELRRLARCLPNIKILMLCGGQPFGAQRDSLQHAPHIIVATPGRLLDHLQKGTVSLDALQTLVMDEADRMLD MGFSDAIDEVIRFAPADRQTLLFSATWPAAIAAISGRVQRNPQTIEIDTVDALPAIEQQFFEVSRHGKIALLQRLLSQHQ PASCVVFCNTKRDCQAVCDALNAAGQSALSLHGDLEQRDRDQTLVRFANGSVRVLVATDVAARGLDIKSLALVVNFELAW DPEVHVHRIGRTARAGEQGLAISFCAPEEAQRATILADMLQLSLNWLPAPTGNTIAPLTAEMATLCIDGGKKAKMRPGDV LGALTGDMGFDGADIGKITVHPAHVYVAIRQNMAQKAYKQLQNGKIKGKSCRVRLLK >Mature_456_residues TAFSTLTVLPAAQLANLNELGYLSMTPVQAAALPAILGRKDVRVQAKTGSGKTAAFGLGLLQHIDPARFETQSLVLCTTR ELADQVAGELRRLARCLPNIKILMLCGGQPFGAQRDSLQHAPHIIVATPGRLLDHLQKGTVSLDALQTLVMDEADRMLDM GFSDAIDEVIRFAPADRQTLLFSATWPAAIAAISGRVQRNPQTIEIDTVDALPAIEQQFFEVSRHGKIALLQRLLSQHQP ASCVVFCNTKRDCQAVCDALNAAGQSALSLHGDLEQRDRDQTLVRFANGSVRVLVATDVAARGLDIKSLALVVNFELAWD PEVHVHRIGRTARAGEQGLAISFCAPEEAQRATILADMLQLSLNWLPAPTGNTIAPLTAEMATLCIDGGKKAKMRPGDVL GALTGDMGFDGADIGKITVHPAHVYVAIRQNMAQKAYKQLQNGKIKGKSCRVRLLK
Specific function: Has a helix-destabilizing activity, which is not coupled to the ATPase activity. Can unwind the 23S rRNA as well as 16S rRNA. Exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA. Could play a major role in ribosome ass
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI31542656, Length=353, Percent_Identity=38.5269121813031, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI45446747, Length=348, Percent_Identity=36.7816091954023, Blast_Score=215, Evalue=6e-56, Organism=Homo sapiens, GI45446743, Length=348, Percent_Identity=36.7816091954023, Blast_Score=215, Evalue=6e-56, Organism=Homo sapiens, GI7661920, Length=349, Percent_Identity=34.3839541547278, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI41327773, Length=364, Percent_Identity=35.989010989011, Blast_Score=213, Evalue=3e-55, Organism=Homo sapiens, GI21071032, Length=370, Percent_Identity=36.2162162162162, Blast_Score=208, Evalue=9e-54, Organism=Homo sapiens, GI164664518, Length=377, Percent_Identity=29.7082228116711, Blast_Score=206, Evalue=3e-53, Organism=Homo sapiens, GI224593278, Length=375, Percent_Identity=36.8, Blast_Score=206, Evalue=5e-53, Organism=Homo sapiens, GI169881239, Length=382, Percent_Identity=36.6492146596859, Blast_Score=205, Evalue=9e-53, Organism=Homo sapiens, GI13514809, Length=382, Percent_Identity=36.6492146596859, Blast_Score=205, Evalue=9e-53, Organism=Homo sapiens, GI301171467, Length=372, Percent_Identity=37.3655913978495, Blast_Score=205, Evalue=9e-53, Organism=Homo sapiens, GI87196351, Length=372, Percent_Identity=37.3655913978495, Blast_Score=205, Evalue=9e-53, Organism=Homo sapiens, GI301171475, Length=372, Percent_Identity=37.3655913978495, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI20149629, Length=330, Percent_Identity=36.6666666666667, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI148613856, Length=350, Percent_Identity=34.5714285714286, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI38201710, Length=350, Percent_Identity=34.5714285714286, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI50659095, Length=408, Percent_Identity=33.8235294117647, Blast_Score=203, Evalue=2e-52, Organism=Homo sapiens, GI262118318, Length=383, Percent_Identity=36.0313315926893, Blast_Score=203, Evalue=2e-52, Organism=Homo sapiens, GI262231852, Length=383, Percent_Identity=36.0313315926893, Blast_Score=202, Evalue=7e-52, Organism=Homo sapiens, GI216548263, Length=383, Percent_Identity=36.0313315926893, Blast_Score=202, Evalue=7e-52, Organism=Homo sapiens, GI4758138, Length=366, Percent_Identity=34.6994535519126, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI13518015, Length=383, Percent_Identity=36.0313315926893, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI222352149, Length=367, Percent_Identity=34.8773841961853, Blast_Score=199, Evalue=6e-51, Organism=Homo sapiens, GI4758112, Length=353, Percent_Identity=31.1614730878187, Blast_Score=192, Evalue=4e-49, Organism=Homo sapiens, GI18375623, Length=353, Percent_Identity=31.1614730878187, Blast_Score=192, Evalue=4e-49, Organism=Homo sapiens, GI41327771, Length=379, Percent_Identity=32.7176781002639, Blast_Score=192, Evalue=5e-49, Organism=Homo sapiens, GI21040371, Length=353, Percent_Identity=31.1614730878187, Blast_Score=191, Evalue=9e-49, Organism=Homo sapiens, GI188035877, Length=347, Percent_Identity=36.8876080691643, Blast_Score=188, Evalue=8e-48, Organism=Homo sapiens, GI55749865, Length=355, Percent_Identity=31.2676056338028, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI38327634, Length=362, Percent_Identity=34.8066298342541, Blast_Score=186, Evalue=4e-47, Organism=Homo sapiens, GI13129006, Length=348, Percent_Identity=34.1954022988506, Blast_Score=184, Evalue=1e-46, Organism=Homo sapiens, GI4503529, Length=354, Percent_Identity=34.7457627118644, Blast_Score=183, Evalue=3e-46, Organism=Homo sapiens, GI83700235, Length=338, Percent_Identity=36.3905325443787, Blast_Score=183, Evalue=4e-46, Organism=Homo sapiens, GI51094101, Length=333, Percent_Identity=35.1351351351351, Blast_Score=176, Evalue=3e-44, Organism=Homo sapiens, GI164419743, Length=333, Percent_Identity=35.1351351351351, Blast_Score=176, Evalue=3e-44, Organism=Homo sapiens, GI13514831, Length=360, Percent_Identity=34.7222222222222, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI41327779, Length=365, Percent_Identity=32.3287671232877, Blast_Score=173, Evalue=3e-43, Organism=Homo sapiens, GI256223453, Length=397, Percent_Identity=29.7229219143577, Blast_Score=169, Evalue=4e-42, Organism=Homo sapiens, GI41327776, Length=329, Percent_Identity=33.434650455927, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI164419732, Length=370, Percent_Identity=28.9189189189189, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI6005743, Length=357, Percent_Identity=29.9719887955182, Blast_Score=156, Evalue=4e-38, Organism=Homo sapiens, GI62241022, Length=337, Percent_Identity=30.5637982195846, Blast_Score=156, Evalue=4e-38, Organism=Homo sapiens, GI8922886, Length=357, Percent_Identity=29.6918767507003, Blast_Score=154, Evalue=1e-37, Organism=Homo sapiens, GI62241024, Length=310, Percent_Identity=31.2903225806452, Blast_Score=148, Evalue=8e-36, Organism=Homo sapiens, GI17505907, Length=419, Percent_Identity=29.5942720763723, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI9506931, Length=376, Percent_Identity=30.0531914893617, Blast_Score=141, Evalue=2e-33, Organism=Homo sapiens, GI38569503, Length=360, Percent_Identity=28.0555555555556, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI38569505, Length=360, Percent_Identity=28.0555555555556, Blast_Score=136, Evalue=4e-32, Organism=Homo sapiens, GI4826686, Length=338, Percent_Identity=28.9940828402367, Blast_Score=132, Evalue=6e-31, Organism=Homo sapiens, GI9966805, Length=309, Percent_Identity=32.0388349514563, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI256773275, Length=357, Percent_Identity=30.2521008403361, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI154759257, Length=398, Percent_Identity=27.3869346733668, Blast_Score=110, Evalue=4e-24, Organism=Homo sapiens, GI20336298, Length=197, Percent_Identity=32.48730964467, Blast_Score=97, Evalue=4e-20, Organism=Escherichia coli, GI1787605, Length=457, Percent_Identity=85.7768052516411, Blast_Score=800, Evalue=0.0, Organism=Escherichia coli, GI87082221, Length=376, Percent_Identity=40.9574468085106, Blast_Score=273, Evalue=2e-74, Organism=Escherichia coli, GI1787016, Length=373, Percent_Identity=39.6782841823056, Blast_Score=236, Evalue=3e-63, Organism=Escherichia coli, GI1790214, Length=357, Percent_Identity=36.1344537815126, Blast_Score=201, Evalue=5e-53, Organism=Escherichia coli, GI1788930, Length=335, Percent_Identity=37.6119402985075, Blast_Score=182, Evalue=5e-47, Organism=Caenorhabditis elegans, GI71995724, Length=349, Percent_Identity=35.8166189111748, Blast_Score=228, Evalue=6e-60, Organism=Caenorhabditis elegans, GI17507121, Length=349, Percent_Identity=35.8166189111748, Blast_Score=227, Evalue=1e-59, Organism=Caenorhabditis elegans, GI71987143, Length=357, Percent_Identity=33.6134453781513, Blast_Score=218, Evalue=4e-57, Organism=Caenorhabditis elegans, GI17555296, Length=331, Percent_Identity=40.1812688821752, Blast_Score=212, Evalue=3e-55, Organism=Caenorhabditis elegans, GI115533224, Length=352, Percent_Identity=37.2159090909091, Blast_Score=209, Evalue=3e-54, Organism=Caenorhabditis elegans, GI17510307, Length=354, Percent_Identity=38.135593220339, Blast_Score=207, Evalue=7e-54, Organism=Caenorhabditis elegans, GI17510309, Length=354, Percent_Identity=38.135593220339, Blast_Score=207, Evalue=8e-54, Organism=Caenorhabditis elegans, GI71995514, Length=354, Percent_Identity=38.135593220339, Blast_Score=207, Evalue=1e-53, Organism=Caenorhabditis elegans, GI86570094, Length=353, Percent_Identity=37.6770538243626, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI17552114, Length=335, Percent_Identity=30.7462686567164, Blast_Score=200, Evalue=1e-51, Organism=Caenorhabditis elegans, GI71982858, Length=360, Percent_Identity=31.1111111111111, Blast_Score=200, Evalue=2e-51, Organism=Caenorhabditis elegans, GI71995718, Length=400, Percent_Identity=34.75, Blast_Score=196, Evalue=2e-50, Organism=Caenorhabditis elegans, GI32565321, Length=376, Percent_Identity=34.3085106382979, Blast_Score=194, Evalue=6e-50, Organism=Caenorhabditis elegans, GI17507945, Length=356, Percent_Identity=34.8314606741573, Blast_Score=192, Evalue=5e-49, Organism=Caenorhabditis elegans, GI17510559, Length=361, Percent_Identity=34.9030470914127, Blast_Score=191, Evalue=6e-49, Organism=Caenorhabditis elegans, GI17507877, Length=391, Percent_Identity=33.5038363171356, Blast_Score=189, Evalue=3e-48, Organism=Caenorhabditis elegans, GI115532546, Length=329, Percent_Identity=36.1702127659575, Blast_Score=185, Evalue=5e-47, Organism=Caenorhabditis elegans, GI17507879, Length=391, Percent_Identity=32.9923273657289, Blast_Score=184, Evalue=6e-47, Organism=Caenorhabditis elegans, GI115532548, Length=329, Percent_Identity=36.1702127659575, Blast_Score=184, Evalue=8e-47, Organism=Caenorhabditis elegans, GI17507881, Length=407, Percent_Identity=32.1867321867322, Blast_Score=184, Evalue=9e-47, Organism=Caenorhabditis elegans, GI17552642, Length=360, Percent_Identity=34.4444444444444, Blast_Score=184, Evalue=1e-46, Organism=Caenorhabditis elegans, GI17537549, Length=375, Percent_Identity=32.5333333333333, Blast_Score=183, Evalue=2e-46, Organism=Caenorhabditis elegans, GI71999646, Length=357, Percent_Identity=33.3333333333333, Blast_Score=179, Evalue=4e-45, Organism=Caenorhabditis elegans, GI71999644, Length=357, Percent_Identity=33.3333333333333, Blast_Score=178, Evalue=6e-45, Organism=Caenorhabditis elegans, GI17505370, Length=362, Percent_Identity=33.1491712707182, Blast_Score=170, Evalue=1e-42, Organism=Caenorhabditis elegans, GI17536099, Length=391, Percent_Identity=30.1790281329923, Blast_Score=166, Evalue=2e-41, Organism=Caenorhabditis elegans, GI17536101, Length=391, Percent_Identity=30.1790281329923, Blast_Score=166, Evalue=2e-41, Organism=Caenorhabditis elegans, GI17536103, Length=391, Percent_Identity=30.1790281329923, Blast_Score=162, Evalue=3e-40, Organism=Caenorhabditis elegans, GI17509811, Length=347, Percent_Identity=31.1239193083574, Blast_Score=160, Evalue=2e-39, Organism=Caenorhabditis elegans, GI17553716, Length=326, Percent_Identity=30.6748466257669, Blast_Score=159, Evalue=2e-39, Organism=Caenorhabditis elegans, GI193206561, Length=325, Percent_Identity=28.9230769230769, Blast_Score=151, Evalue=6e-37, Organism=Caenorhabditis elegans, GI193208216, Length=396, Percent_Identity=33.3333333333333, Blast_Score=145, Evalue=3e-35, Organism=Caenorhabditis elegans, GI17556951, Length=387, Percent_Identity=28.6821705426357, Blast_Score=145, Evalue=5e-35, Organism=Caenorhabditis elegans, GI71990816, Length=382, Percent_Identity=30.8900523560209, Blast_Score=140, Evalue=2e-33, Organism=Caenorhabditis elegans, GI17507641, Length=402, Percent_Identity=28.6069651741293, Blast_Score=137, Evalue=2e-32, Organism=Caenorhabditis elegans, GI32564046, Length=380, Percent_Identity=29.2105263157895, Blast_Score=127, Evalue=1e-29, Organism=Caenorhabditis elegans, GI71982862, Length=194, Percent_Identity=34.5360824742268, Blast_Score=124, Evalue=8e-29, Organism=Caenorhabditis elegans, GI17508543, Length=367, Percent_Identity=29.700272479564, Blast_Score=120, Evalue=1e-27, Organism=Caenorhabditis elegans, GI25148203, Length=387, Percent_Identity=25.3229974160207, Blast_Score=117, Evalue=9e-27, Organism=Caenorhabditis elegans, GI25148291, Length=331, Percent_Identity=27.4924471299094, Blast_Score=105, Evalue=7e-23, Organism=Caenorhabditis elegans, GI71997889, Length=393, Percent_Identity=26.972010178117, Blast_Score=104, Evalue=9e-23, Organism=Caenorhabditis elegans, GI71987152, Length=105, Percent_Identity=36.1904761904762, Blast_Score=89, Evalue=6e-18, Organism=Saccharomyces cerevisiae, GI6323021, Length=372, Percent_Identity=36.2903225806452, Blast_Score=222, Evalue=8e-59, Organism=Saccharomyces cerevisiae, GI6321360, Length=350, Percent_Identity=40, Blast_Score=217, Evalue=3e-57, Organism=Saccharomyces cerevisiae, GI6324217, Length=345, Percent_Identity=37.3913043478261, Blast_Score=210, Evalue=4e-55, Organism=Saccharomyces cerevisiae, GI6321856, Length=351, Percent_Identity=39.031339031339, Blast_Score=206, Evalue=6e-54, Organism=Saccharomyces cerevisiae, GI6320224, Length=360, Percent_Identity=31.9444444444444, Blast_Score=203, Evalue=5e-53, Organism=Saccharomyces cerevisiae, GI6320119, Length=356, Percent_Identity=32.0224719101124, Blast_Score=201, Evalue=2e-52, Organism=Saccharomyces cerevisiae, GI6320041, Length=330, Percent_Identity=32.7272727272727, Blast_Score=197, Evalue=4e-51, Organism=Saccharomyces cerevisiae, GI6324778, Length=376, Percent_Identity=34.5744680851064, Blast_Score=191, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6323947, Length=348, Percent_Identity=33.9080459770115, Blast_Score=190, Evalue=4e-49, Organism=Saccharomyces cerevisiae, GI6325138, Length=351, Percent_Identity=36.1823361823362, Blast_Score=188, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6321111, Length=363, Percent_Identity=33.8842975206612, Blast_Score=186, Evalue=1e-47, Organism=Saccharomyces cerevisiae, GI6321963, Length=349, Percent_Identity=36.1031518624642, Blast_Score=184, Evalue=3e-47, Organism=Saccharomyces cerevisiae, GI6324620, Length=354, Percent_Identity=31.9209039548023, Blast_Score=181, Evalue=2e-46, Organism=Saccharomyces cerevisiae, GI6322912, Length=350, Percent_Identity=32.5714285714286, Blast_Score=180, Evalue=4e-46, Organism=Saccharomyces cerevisiae, GI6322323, Length=350, Percent_Identity=32.5714285714286, Blast_Score=180, Evalue=4e-46, Organism=Saccharomyces cerevisiae, GI6320449, Length=376, Percent_Identity=31.1170212765957, Blast_Score=178, Evalue=1e-45, Organism=Saccharomyces cerevisiae, GI6320173, Length=394, Percent_Identity=30.7106598984772, Blast_Score=170, Evalue=5e-43, Organism=Saccharomyces cerevisiae, GI6319618, Length=472, Percent_Identity=27.5423728813559, Blast_Score=165, Evalue=2e-41, Organism=Saccharomyces cerevisiae, GI6322427, Length=353, Percent_Identity=31.4447592067989, Blast_Score=165, Evalue=2e-41, Organism=Saccharomyces cerevisiae, GI6319714, Length=412, Percent_Identity=29.126213592233, Blast_Score=160, Evalue=4e-40, Organism=Saccharomyces cerevisiae, GI6320400, Length=368, Percent_Identity=29.0760869565217, Blast_Score=147, Evalue=3e-36, Organism=Saccharomyces cerevisiae, GI6323306, Length=401, Percent_Identity=26.4339152119701, Blast_Score=127, Evalue=4e-30, Organism=Saccharomyces cerevisiae, GI6321267, Length=352, Percent_Identity=29.5454545454545, Blast_Score=123, Evalue=5e-29, Organism=Saccharomyces cerevisiae, GI6324366, Length=347, Percent_Identity=24.7838616714697, Blast_Score=103, Evalue=7e-23, Organism=Saccharomyces cerevisiae, GI6322876, Length=160, Percent_Identity=32.5, Blast_Score=88, Evalue=3e-18, Organism=Drosophila melanogaster, GI24584399, Length=356, Percent_Identity=37.9213483146067, Blast_Score=229, Evalue=4e-60, Organism=Drosophila melanogaster, GI24642151, Length=366, Percent_Identity=36.3387978142077, Blast_Score=221, Evalue=9e-58, Organism=Drosophila melanogaster, GI24645031, Length=363, Percent_Identity=34.435261707989, Blast_Score=217, Evalue=1e-56, Organism=Drosophila melanogaster, GI18857967, Length=370, Percent_Identity=34.3243243243243, Blast_Score=204, Evalue=8e-53, Organism=Drosophila melanogaster, GI17136814, Length=339, Percent_Identity=36.8731563421829, Blast_Score=204, Evalue=8e-53, Organism=Drosophila melanogaster, GI24585582, Length=333, Percent_Identity=36.9369369369369, Blast_Score=202, Evalue=3e-52, Organism=Drosophila melanogaster, GI24644483, Length=364, Percent_Identity=33.7912087912088, Blast_Score=199, Evalue=2e-51, Organism=Drosophila melanogaster, GI281361218, Length=364, Percent_Identity=33.7912087912088, Blast_Score=199, Evalue=3e-51, Organism=Drosophila melanogaster, GI24644481, Length=364, Percent_Identity=33.7912087912088, Blast_Score=199, Evalue=3e-51, Organism=Drosophila melanogaster, GI24644487, Length=364, Percent_Identity=33.7912087912088, Blast_Score=199, Evalue=3e-51, Organism=Drosophila melanogaster, GI45551833, Length=364, Percent_Identity=33.7912087912088, Blast_Score=199, Evalue=3e-51, Organism=Drosophila melanogaster, GI24644485, Length=364, Percent_Identity=33.7912087912088, Blast_Score=199, Evalue=3e-51, Organism=Drosophila melanogaster, GI24583279, Length=335, Percent_Identity=32.8358208955224, Blast_Score=199, Evalue=4e-51, Organism=Drosophila melanogaster, GI24583281, Length=335, Percent_Identity=32.8358208955224, Blast_Score=199, Evalue=4e-51, Organism=Drosophila melanogaster, GI24644479, Length=364, Percent_Identity=33.7912087912088, Blast_Score=199, Evalue=4e-51, Organism=Drosophila melanogaster, GI28574962, Length=363, Percent_Identity=34.7107438016529, Blast_Score=197, Evalue=1e-50, Organism=Drosophila melanogaster, GI24662330, Length=350, Percent_Identity=35.7142857142857, Blast_Score=196, Evalue=2e-50, Organism=Drosophila melanogaster, GI28575014, Length=341, Percent_Identity=35.4838709677419, Blast_Score=196, Evalue=4e-50, Organism=Drosophila melanogaster, GI17977678, Length=367, Percent_Identity=34.6049046321526, Blast_Score=195, Evalue=4e-50, Organism=Drosophila melanogaster, GI21355075, Length=364, Percent_Identity=33.2417582417582, Blast_Score=195, Evalue=6e-50, Organism=Drosophila melanogaster, GI17985987, Length=367, Percent_Identity=37.3297002724796, Blast_Score=194, Evalue=7e-50, Organism=Drosophila melanogaster, GI21356161, Length=351, Percent_Identity=35.8974358974359, Blast_Score=192, Evalue=4e-49, Organism=Drosophila melanogaster, GI24584994, Length=376, Percent_Identity=32.1808510638298, Blast_Score=192, Evalue=4e-49, Organism=Drosophila melanogaster, GI24582080, Length=351, Percent_Identity=34.1880341880342, Blast_Score=190, Evalue=2e-48, Organism=Drosophila melanogaster, GI24582078, Length=351, Percent_Identity=34.1880341880342, Blast_Score=190, Evalue=2e-48, Organism=Drosophila melanogaster, GI17136248, Length=351, Percent_Identity=34.1880341880342, Blast_Score=190, Evalue=2e-48, Organism=Drosophila melanogaster, GI24582075, Length=351, Percent_Identity=34.1880341880342, Blast_Score=190, Evalue=2e-48, Organism=Drosophila melanogaster, GI24581954, Length=354, Percent_Identity=30.7909604519774, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI24581952, Length=354, Percent_Identity=30.7909604519774, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI24581956, Length=354, Percent_Identity=30.7909604519774, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI28571808, Length=361, Percent_Identity=33.5180055401662, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI28571809, Length=361, Percent_Identity=33.5180055401662, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI21355559, Length=370, Percent_Identity=34.3243243243243, Blast_Score=164, Evalue=1e-40, Organism=Drosophila melanogaster, GI281365720, Length=306, Percent_Identity=34.9673202614379, Blast_Score=161, Evalue=1e-39, Organism=Drosophila melanogaster, GI17647335, Length=367, Percent_Identity=27.5204359673025, Blast_Score=155, Evalue=6e-38, Organism=Drosophila melanogaster, GI24643725, Length=368, Percent_Identity=28.5326086956522, Blast_Score=141, Evalue=9e-34, Organism=Drosophila melanogaster, GI20130173, Length=454, Percent_Identity=28.6343612334802, Blast_Score=141, Evalue=1e-33, Organism=Drosophila melanogaster, GI18859659, Length=439, Percent_Identity=27.7904328018223, Blast_Score=139, Evalue=4e-33, Organism=Drosophila melanogaster, GI28571338, Length=439, Percent_Identity=28.0182232346241, Blast_Score=139, Evalue=4e-33, Organism=Drosophila melanogaster, GI24642822, Length=382, Percent_Identity=28.5340314136126, Blast_Score=138, Evalue=9e-33, Organism=Drosophila melanogaster, GI24668515, Length=337, Percent_Identity=29.673590504451, Blast_Score=135, Evalue=4e-32, Organism=Drosophila melanogaster, GI24666101, Length=385, Percent_Identity=30.3896103896104, Blast_Score=135, Evalue=5e-32, Organism=Drosophila melanogaster, GI19920478, Length=357, Percent_Identity=29.4117647058824, Blast_Score=128, Evalue=6e-30, Organism=Drosophila melanogaster, GI24640164, Length=374, Percent_Identity=21.9251336898396, Blast_Score=75, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005580 - InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 49290; Mature: 49158
Theoretical pI: Translated: 8.28; Mature: 8.28
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAFSTLTVLPAAQLANLNELGYLSMTPVQAAALPAILGRKDVRVQAKTGSGKTAAFGLG CCCCHHHHHCCHHHHCCCCCCCCEEECCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHH LLQHIDPARFETQSLVLCTTRELADQVAGELRRLARCLPNIKILMLCGGQPFGAQRDSLQ HHHHCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHC HAPHIIVATPGRLLDHLQKGTVSLDALQTLVMDEADRMLDMGFSDAIDEVIRFAPADRQT CCCEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCE LLFSATWPAAIAAISGRVQRNPQTIEIDTVDALPAIEQQFFEVSRHGKIALLQRLLSQHQ EEEECCCHHHHHHHHCHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCC PASCVVFCNTKRDCQAVCDALNAAGQSALSLHGDLEQRDRDQTLVRFANGSVRVLVATDV CCEEEEEECCCHHHHHHHHHHHHCCCCCEEECCCHHHCCCHHHEEEECCCCEEEEEEECH AARGLDIKSLALVVNFELAWDPEVHVHRIGRTARAGEQGLAISFCAPEEAQRATILADML HHCCCCCEEEEEEEEEEEEECCCHHHEECCCHHCCCCCCCEEEEECCCHHHHHHHHHHHH QLSLNWLPAPTGNTIAPLTAEMATLCIDGGKKAKMRPGDVLGALTGDMGFDGADIGKITV HHHHCCCCCCCCCCCCHHHHHHHHHEECCCCCCCCCCCHHHEEEECCCCCCCCCCCEEEE HPAHVYVAIRQNMAQKAYKQLQNGKIKGKSCRVRLLK EHHEEEEEHHHHHHHHHHHHHHCCCCCCCCCEEEECC >Mature Secondary Structure TAFSTLTVLPAAQLANLNELGYLSMTPVQAAALPAILGRKDVRVQAKTGSGKTAAFGLG CCCHHHHHCCHHHHCCCCCCCCEEECCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHH LLQHIDPARFETQSLVLCTTRELADQVAGELRRLARCLPNIKILMLCGGQPFGAQRDSLQ HHHHCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHC HAPHIIVATPGRLLDHLQKGTVSLDALQTLVMDEADRMLDMGFSDAIDEVIRFAPADRQT CCCEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCE LLFSATWPAAIAAISGRVQRNPQTIEIDTVDALPAIEQQFFEVSRHGKIALLQRLLSQHQ EEEECCCHHHHHHHHCHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCC PASCVVFCNTKRDCQAVCDALNAAGQSALSLHGDLEQRDRDQTLVRFANGSVRVLVATDV CCEEEEEECCCHHHHHHHHHHHHCCCCCEEECCCHHHCCCHHHEEEECCCCEEEEEEECH AARGLDIKSLALVVNFELAWDPEVHVHRIGRTARAGEQGLAISFCAPEEAQRATILADML HHCCCCCEEEEEEEEEEEEECCCHHHEECCCHHCCCCCCCEEEEECCCHHHHHHHHHHHH QLSLNWLPAPTGNTIAPLTAEMATLCIDGGKKAKMRPGDVLGALTGDMGFDGADIGKITV HHHHCCCCCCCCCCCCHHHHHHHHHEECCCCCCCCCCCHHHEEEECCCCCCCCCCCEEEE HPAHVYVAIRQNMAQKAYKQLQNGKIKGKSCRVRLLK EHHEEEEEHHHHHHHHHHHHHHCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2216714; 8253085; 9097039; 9278503; 9016593; 11350034 [H]