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The map label for this gene is 238894408

Identifier: 238894408

GI number: 238894408

Start: 2298791

End: 2299351

Strand: Direct

Name: 238894408

Synonym: KP1_2392

Alternate gene names: NA

Gene position: 2298791-2299351 (Clockwise)

Preceding gene: 238894406

Following gene: 238894409

Centisome position: 43.8

GC content: 46.17

Gene sequence:

>561_bases
TTGCTTTATCATCGTCACGTTTCACATCAATATATCTTCAATAATTATTTCTTAAGGAAAGGAACTGCTATGGCTGATAC
GTTCCAGAATGAAGTCCCCAGGGCGCGCATTAATCTCAAATTATCTCTTCATACCGGCGGCGCGCAAAAGAAGGTCGAAC
TGCCGCTCAAACTGCTTACCATTGGCGATTTTAGTCATGGTAAGGAAAACCGGCCTTTATCGGAAAGAGAAAAAATCAAC
GTCAATAAAAATAATTTTAACAGCGTACTTTCGGAATTTAGCCCGGAAGTTAACCTCTCGGTGCCGAATACGCTGGCCGG
CAATGGCGAAGAGGAGAACGTCAGACTGCGTTTTACCGACATCAAAGATTTTGAACCGGAGCAGGTTGCCCGGCAAATTC
CGCAACTCCGCGCCATGCTGGCGATGCGTAATTTATTACGCGATCTCAAATCCAATCTGCTCGATAACGCCACTTTCAGA
AAAGAGCTTGAGGCAATCCTGAAAGATCCGGCGCTGTCCCAGGAATTACGCGACGAAATGAGTGCGCTTGCCCCGAAATA
A

Upstream 100 bases:

>100_bases
TTAAATATTGATATTCATGGTGCTTTTATTTTCGTGGTGAAAGGGGGTGTTTATGAATAAATATAATTATTAGGTGGTTA
AGTTGATCGTTAATCCATTT

Downstream 100 bases:

>100_bases
GTGCGGGGCAAGTCTGTTAATGGATTAACCGGGAAAATGCTAATGTCTGTTACCACAGAAAACGCCCCTGTTCAGGGGCA
AACCACGCTGCAGGAAAACA

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Cytoplasmic Protein SciH; Cytoplasmic Protein; Type VI Secretion Protein VasQ; Protein ImpB; Type VI Secretion; Conserved Protein; Type VI Secretion System Protein ImpB

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MLYHRHVSHQYIFNNYFLRKGTAMADTFQNEVPRARINLKLSLHTGGAQKKVELPLKLLTIGDFSHGKENRPLSEREKIN
VNKNNFNSVLSEFSPEVNLSVPNTLAGNGEEENVRLRFTDIKDFEPEQVARQIPQLRAMLAMRNLLRDLKSNLLDNATFR
KELEAILKDPALSQELRDEMSALAPK

Sequences:

>Translated_186_residues
MLYHRHVSHQYIFNNYFLRKGTAMADTFQNEVPRARINLKLSLHTGGAQKKVELPLKLLTIGDFSHGKENRPLSEREKIN
VNKNNFNSVLSEFSPEVNLSVPNTLAGNGEEENVRLRFTDIKDFEPEQVARQIPQLRAMLAMRNLLRDLKSNLLDNATFR
KELEAILKDPALSQELRDEMSALAPK
>Mature_186_residues
MLYHRHVSHQYIFNNYFLRKGTAMADTFQNEVPRARINLKLSLHTGGAQKKVELPLKLLTIGDFSHGKENRPLSEREKIN
VNKNNFNSVLSEFSPEVNLSVPNTLAGNGEEENVRLRFTDIKDFEPEQVARQIPQLRAMLAMRNLLRDLKSNLLDNATFR
KELEAILKDPALSQELRDEMSALAPK

Specific function: Unknown

COG id: COG3516

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21340; Mature: 21340

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYHRHVSHQYIFNNYFLRKGTAMADTFQNEVPRARINLKLSLHTGGAQKKVELPLKLLT
CCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEEEEECCCCCCEEECCEEEEE
IGDFSHGKENRPLSEREKINVNKNNFNSVLSEFSPEVNLSVPNTLAGNGEEENVRLRFTD
ECCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEEEEC
IKDFEPEQVARQIPQLRAMLAMRNLLRDLKSNLLDNATFRKELEAILKDPALSQELRDEM
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHH
SALAPK
HHHCCC
>Mature Secondary Structure
MLYHRHVSHQYIFNNYFLRKGTAMADTFQNEVPRARINLKLSLHTGGAQKKVELPLKLLT
CCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEEEEECCCCCCEEECCEEEEE
IGDFSHGKENRPLSEREKINVNKNNFNSVLSEFSPEVNLSVPNTLAGNGEEENVRLRFTD
ECCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEEEEC
IKDFEPEQVARQIPQLRAMLAMRNLLRDLKSNLLDNATFRKELEAILKDPALSQELRDEM
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHH
SALAPK
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA