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The map label for this gene is ynjB [H]

Identifier: 238894271

GI number: 238894271

Start: 2161254

End: 2162432

Strand: Reverse

Name: ynjB [H]

Synonym: KP1_2245

Alternate gene names: 238894271

Gene position: 2162432-2161254 (Counterclockwise)

Preceding gene: 238894272

Following gene: 238894270

Centisome position: 41.2

GC content: 67.35

Gene sequence:

>1179_bases
ATGCGCCGTTTGCGTGATTACAGCCTCTGTCTGTGCCTGCTGCTGCTCTGGCCGCTGGCGGTTAATGCCGACGACAGCTG
GCGGCAGATTCAGACGGAAGCCCGCGGACAGACCGTCTGGTTTAACGCCTGGGGCGGCGACCCGGCCGTCAATCGCTATC
TGGCGTGGGTCAGCGAAGAGGTCAAACGCTATTACGCAATCGACCTGCGTATTGTGCCTGTCGCCGACGCCGCCGACGCA
GTGAAACGCATCCAGACCGAGGCGCAGGCCGGTCGTCGCCAGGGCGGGTCAGTGGATCTGCTGTGGATCAACGGCGAAAA
CTTTCGCACGCTTAAACAGGCCAACTTGCTGCTCACCGGCTGGGCCGAATCGCTGCCCAACTGGCGCTATGTCGATCTGC
AAAAGCCGGTACGGGAAGATTTTTCAGTCGCCACCGAGGGCGCGGAGTCGCCGTGGGGCAGCGCCCAGCTGACGTTTATC
GCCCGCCGCGGACAAACGCCGCAGCCGCCCACCAGCCCGCAGGCGCTGCTGGCCTTCGCCAGAGCCCATCCGGGCAGCGT
AACCTACCCGCGGCCGCCGGACTTCACCGGTACCGCCCTGCTGGAGCAACTGCTGATCGCGCTCACCGACCAGCCAGCCG
CCCTGCGCCAGCCGCCGCAGCCGGCGACCTTCGCGGCGGTCACCGCCCCGCTGTGGCGCTATCTCGATGCGCTGCACCCG
GCCCTGTGGCGGGCGGGCAAGGATTTCCCGGCGTCGCCGGCGCGGATGGACGCCATGCTCAACCAGGGCACCCTCCGCCT
GTCGCTGACGTTTAACCCGCTGCACGCCCGGCAGAAAGCCGCCAGCGGCGAATTACCGACGGACAGCTCCAGCTTCGGCT
TTACCGCGGGGACCCTCGGCAACGTCCATTTCGTTACCATCCCGGCTAACGCCCGCGCTGTCGCTGGCGCCAAAGTAGTG
GCCAATTTCCTGCTCTCCCCTGAGGCGCAATTGCGCAAGGCCGATGCCGCCGTCTGGGGCGATCCGAGCGTACTGGATCC
GCAGCGTCTGCCTGACGGCCAGCGCCAGGCGCTGGCGGCAGCCCTGCCGCAGGATCTGCCGCCGGTGCTTGCCGAGCCTC
ACGCGGCATGGGTTGACGCGCTGGAGCAGGAATGGCTGCGCCGCTACGGTACCCACTGA

Upstream 100 bases:

>100_bases
GCCTGCAAAATTTATCAGCGCGGTTCAATGCCGCGATGGCGATCCCGGCTCAGGGGTTGTGCCAGATACCCACCTCTTCC
TCGCAGAATAAGGAGTAACG

Downstream 100 bases:

>100_bases
TCCTGCTGGCCTGGGGGGCGATGGCGGCGATCTATCTGCCGCTGCTCCCCGCCGCCGGGGAACTGGTGGGCGCTGCGCGC
TCCCCGGCCCACTGGCGGGC

Product: putative ABC transporter solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MRRLRDYSLCLCLLLLWPLAVNADDSWRQIQTEARGQTVWFNAWGGDPAVNRYLAWVSEEVKRYYAIDLRIVPVADAADA
VKRIQTEAQAGRRQGGSVDLLWINGENFRTLKQANLLLTGWAESLPNWRYVDLQKPVREDFSVATEGAESPWGSAQLTFI
ARRGQTPQPPTSPQALLAFARAHPGSVTYPRPPDFTGTALLEQLLIALTDQPAALRQPPQPATFAAVTAPLWRYLDALHP
ALWRAGKDFPASPARMDAMLNQGTLRLSLTFNPLHARQKAASGELPTDSSSFGFTAGTLGNVHFVTIPANARAVAGAKVV
ANFLLSPEAQLRKADAAVWGDPSVLDPQRLPDGQRQALAAALPQDLPPVLAEPHAAWVDALEQEWLRRYGTH

Sequences:

>Translated_392_residues
MRRLRDYSLCLCLLLLWPLAVNADDSWRQIQTEARGQTVWFNAWGGDPAVNRYLAWVSEEVKRYYAIDLRIVPVADAADA
VKRIQTEAQAGRRQGGSVDLLWINGENFRTLKQANLLLTGWAESLPNWRYVDLQKPVREDFSVATEGAESPWGSAQLTFI
ARRGQTPQPPTSPQALLAFARAHPGSVTYPRPPDFTGTALLEQLLIALTDQPAALRQPPQPATFAAVTAPLWRYLDALHP
ALWRAGKDFPASPARMDAMLNQGTLRLSLTFNPLHARQKAASGELPTDSSSFGFTAGTLGNVHFVTIPANARAVAGAKVV
ANFLLSPEAQLRKADAAVWGDPSVLDPQRLPDGQRQALAAALPQDLPPVLAEPHAAWVDALEQEWLRRYGTH
>Mature_392_residues
MRRLRDYSLCLCLLLLWPLAVNADDSWRQIQTEARGQTVWFNAWGGDPAVNRYLAWVSEEVKRYYAIDLRIVPVADAADA
VKRIQTEAQAGRRQGGSVDLLWINGENFRTLKQANLLLTGWAESLPNWRYVDLQKPVREDFSVATEGAESPWGSAQLTFI
ARRGQTPQPPTSPQALLAFARAHPGSVTYPRPPDFTGTALLEQLLIALTDQPAALRQPPQPATFAAVTAPLWRYLDALHP
ALWRAGKDFPASPARMDAMLNQGTLRLSLTFNPLHARQKAASGELPTDSSSFGFTAGTLGNVHFVTIPANARAVAGAKVV
ANFLLSPEAQLRKADAAVWGDPSVLDPQRLPDGQRQALAAALPQDLPPVLAEPHAAWVDALEQEWLRRYGTH

Specific function: Unknown

COG id: COG4134

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081966, Length=373, Percent_Identity=77.4798927613941, Blast_Score=566, Evalue=1e-163,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 43123; Mature: 43123

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLRDYSLCLCLLLLWPLAVNADDSWRQIQTEARGQTVWFNAWGGDPAVNRYLAWVSEE
CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHH
VKRYYAIDLRIVPVADAADAVKRIQTEAQAGRRQGGSVDLLWINGENFRTLKQANLLLTG
HHHEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEHHHCCEEEEE
WAESLPNWRYVDLQKPVREDFSVATEGAESPWGSAQLTFIARRGQTPQPPTSPQALLAFA
HHHHCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHH
RAHPGSVTYPRPPDFTGTALLEQLLIALTDQPAALRQPPQPATFAAVTAPLWRYLDALHP
HCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHH
ALWRAGKDFPASPARMDAMLNQGTLRLSLTFNPLHARQKAASGELPTDSSSFGFTAGTLG
HHHHCCCCCCCCHHHHHHHHCCCEEEEEEEECHHHHHHHHCCCCCCCCCCCCCEEECCCC
NVHFVTIPANARAVAGAKVVANFLLSPEAQLRKADAAVWGDPSVLDPQRLPDGQRQALAA
CEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCHHHCCCHHHHHHHH
ALPQDLPPVLAEPHAAWVDALEQEWLRRYGTH
HCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRRLRDYSLCLCLLLLWPLAVNADDSWRQIQTEARGQTVWFNAWGGDPAVNRYLAWVSEE
CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHH
VKRYYAIDLRIVPVADAADAVKRIQTEAQAGRRQGGSVDLLWINGENFRTLKQANLLLTG
HHHEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEHHHCCEEEEE
WAESLPNWRYVDLQKPVREDFSVATEGAESPWGSAQLTFIARRGQTPQPPTSPQALLAFA
HHHHCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHH
RAHPGSVTYPRPPDFTGTALLEQLLIALTDQPAALRQPPQPATFAAVTAPLWRYLDALHP
HCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHH
ALWRAGKDFPASPARMDAMLNQGTLRLSLTFNPLHARQKAASGELPTDSSSFGFTAGTLG
HHHHCCCCCCCCHHHHHHHHCCCEEEEEEEECHHHHHHHHCCCCCCCCCCCCCEEECCCC
NVHFVTIPANARAVAGAKVVANFLLSPEAQLRKADAAVWGDPSVLDPQRLPDGQRQALAA
CEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCHHHCCCHHHHHHHH
ALPQDLPPVLAEPHAAWVDALEQEWLRRYGTH
HCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503; 10806384 [H]