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The map label for this gene is selD [H]

Identifier: 238894262

GI number: 238894262

Start: 2150817

End: 2151860

Strand: Direct

Name: selD [H]

Synonym: KP1_2233

Alternate gene names: 238894262

Gene position: 2150817-2151860 (Clockwise)

Preceding gene: 238894260

Following gene: 238894263

Centisome position: 40.98

GC content: 63.51

Gene sequence:

>1044_bases
ATGAGCGAGCAAGCCATTCGTTTAACGCAATACAGCCACGGAGCCGGTTGTGGTTGTAAAATTTCCCCGAAAGTGCTGGA
AACTATCCTGCATAGCGAGCAGGCGAAGTTTGTCGACCCAAACCTGCTTGTCGGCAACGAAACCAGCGATGATGCCGCCG
TTTACGATCTCGGTAATGGCACCTCGATCGTCAGCACCACCGATTTCTTTATGCCGATTGTCGATAACCCGTTCGACTTT
GGCCGTATCGCCGCCACCAACGCCATCAGCGATATTTTCGCTATGGGCGGGAAACCGATTATGGCGATTGCCATCCTCGG
CTGGCCGATCAACACCCTGGCGCCGGAAATCGCTCGCGAAGTGGTGGAGGGCGGGCGCTTTGCCTGCCAGCAGGCGGGGA
TCGCGCTGGCGGGCGGCCACTCCATTGACGCCCCGGAGCCGATCTTCGGTCTGGCGGTCACCGGCGTGGTGCCCACCGAG
CGCATCAAGAAAAACAGCACCGCCCAGGCGGGTTGCAAACTGTATCTTACTAAACCGCTGGGGATCGGCGTACTGACCAC
CGCGGAGAAAAAATCGCTGCTCAAGCCAGAGCATCAGGGACTGGCGACGGAGACCATGTGCCAGATGAACCTCGCCGGCG
CCGCGTTTGCCGCCATCGACGGGGTGAAGGCGATGACCGACGTCACCGGCTTTGGCCTGCTCGGCCACCTCAGCGAGGTG
TGCCGCGGGGCCGGCGTGCAGGCGCAGCTGCGCTATGCCGATATCCCGAAACTGCCGGGGGTGGAGGACTATATCGCCGC
CGGCGCGGTGCCGGGCGGCACCGGGCGCAACTTTGCCAGCTACGGCCATCTCATGGGCGAGATGCCGACGGAGTGGCGGG
ATCTGCTGTGCGATCCGCAGACCTCCGGCGGTCTGCTGCTGGCGGTGACCCCGGAGGCGGAGGCGGAAGTTCAGGCCGCC
GCGGCGGAGTTCGGCATTAAGCTGGCCGCCATCGGCGAGCTGGTGACCGCCCGCGGCGGGCGACCCATGATCGAGATCCG
TTGA

Upstream 100 bases:

>100_bases
GTCTGCTTAATGAGCAACCATACGCGATTTCAGACTGTCGTACTTACCACCCTGGCGTTTGGGCGCTAACATAGCGGGAT
TGCAATGACAGGAGATGTCC

Downstream 100 bases:

>100_bases
TTCGATGCGGTTGTTTATTGCAGAAAAACCGAGTCTCGGTCGGGCTATCGCCGATGTGTTGCCTAAACCGCACCGCAAAG
GCGATGGCTATATTGAGTGC

Product: selenophosphate synthetase

Products: NA

Alternate protein names: Selenium donor protein; Selenophosphate synthase [H]

Number of amino acids: Translated: 347; Mature: 346

Protein sequence:

>347_residues
MSEQAIRLTQYSHGAGCGCKISPKVLETILHSEQAKFVDPNLLVGNETSDDAAVYDLGNGTSIVSTTDFFMPIVDNPFDF
GRIAATNAISDIFAMGGKPIMAIAILGWPINTLAPEIAREVVEGGRFACQQAGIALAGGHSIDAPEPIFGLAVTGVVPTE
RIKKNSTAQAGCKLYLTKPLGIGVLTTAEKKSLLKPEHQGLATETMCQMNLAGAAFAAIDGVKAMTDVTGFGLLGHLSEV
CRGAGVQAQLRYADIPKLPGVEDYIAAGAVPGGTGRNFASYGHLMGEMPTEWRDLLCDPQTSGGLLLAVTPEAEAEVQAA
AAEFGIKLAAIGELVTARGGRPMIEIR

Sequences:

>Translated_347_residues
MSEQAIRLTQYSHGAGCGCKISPKVLETILHSEQAKFVDPNLLVGNETSDDAAVYDLGNGTSIVSTTDFFMPIVDNPFDF
GRIAATNAISDIFAMGGKPIMAIAILGWPINTLAPEIAREVVEGGRFACQQAGIALAGGHSIDAPEPIFGLAVTGVVPTE
RIKKNSTAQAGCKLYLTKPLGIGVLTTAEKKSLLKPEHQGLATETMCQMNLAGAAFAAIDGVKAMTDVTGFGLLGHLSEV
CRGAGVQAQLRYADIPKLPGVEDYIAAGAVPGGTGRNFASYGHLMGEMPTEWRDLLCDPQTSGGLLLAVTPEAEAEVQAA
AAEFGIKLAAIGELVTARGGRPMIEIR
>Mature_346_residues
SEQAIRLTQYSHGAGCGCKISPKVLETILHSEQAKFVDPNLLVGNETSDDAAVYDLGNGTSIVSTTDFFMPIVDNPFDFG
RIAATNAISDIFAMGGKPIMAIAILGWPINTLAPEIAREVVEGGRFACQQAGIALAGGHSIDAPEPIFGLAVTGVVPTER
IKKNSTAQAGCKLYLTKPLGIGVLTTAEKKSLLKPEHQGLATETMCQMNLAGAAFAAIDGVKAMTDVTGFGLLGHLSEVC
RGAGVQAQLRYADIPKLPGVEDYIAAGAVPGGTGRNFASYGHLMGEMPTEWRDLLCDPQTSGGLLLAVTPEAEAEVQAAA
AEFGIKLAAIGELVTARGGRPMIEIR

Specific function: Synthesizes selenophosphate from selenide and ATP [H]

COG id: COG0709

COG function: function code E; Selenophosphate synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the selenophosphate synthase 1 family. Class I subfamily [H]

Homologues:

Organism=Homo sapiens, GI24797148, Length=345, Percent_Identity=29.8550724637681, Blast_Score=109, Evalue=4e-24,
Organism=Homo sapiens, GI15011844, Length=374, Percent_Identity=29.4117647058824, Blast_Score=97, Evalue=3e-20,
Organism=Escherichia coli, GI1788062, Length=347, Percent_Identity=88.1844380403458, Blast_Score=635, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17543426, Length=332, Percent_Identity=31.6265060240964, Blast_Score=115, Evalue=5e-26,
Organism=Drosophila melanogaster, GI24653602, Length=268, Percent_Identity=31.3432835820896, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24653604, Length=268, Percent_Identity=31.3432835820896, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI28574119, Length=327, Percent_Identity=29.3577981651376, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI28574118, Length=267, Percent_Identity=30.7116104868914, Blast_Score=83, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR016188
- InterPro:   IPR004536
- InterPro:   IPR023061 [H]

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]

EC number: =2.7.9.3 [H]

Molecular weight: Translated: 36210; Mature: 36079

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEQAIRLTQYSHGAGCGCKISPKVLETILHSEQAKFVDPNLLVGNETSDDAAVYDLGNG
CCCCEEEEEECCCCCCCCCEECHHHHHHHHHCCCCCCCCCCEEECCCCCCCCEEEECCCC
TSIVSTTDFFMPIVDNPFDFGRIAATNAISDIFAMGGKPIMAIAILGWPINTLAPEIARE
CEEEEEHHEEHCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHH
VVEGGRFACQQAGIALAGGHSIDAPEPIFGLAVTGVVPTERIKKNSTAQAGCKLYLTKPL
HHHCCHHHHHHCCEEEECCCCCCCCCCCEEEEEECCCCHHHHHCCCCCCCCEEEEEECCC
GIGVLTTAEKKSLLKPEHQGLATETMCQMNLAGAAFAAIDGVKAMTDVTGFGLLGHLSEV
CCEEEECHHHHHHCCCHHCCCHHHHHHHHHHCHHHHHHHHCHHHHHHHHHHHHHHHHHHH
CRGAGVQAQLRYADIPKLPGVEDYIAAGAVPGGTGRNFASYGHLMGEMPTEWRDLLCDPQ
HHCCCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHCCCCC
TSGGLLLAVTPEAEAEVQAAAAEFGIKLAAIGELVTARGGRPMIEIR
CCCCEEEEECCCCHHHHHHHHHHHCEEHHHHHHHHHCCCCCEEEEEC
>Mature Secondary Structure 
SEQAIRLTQYSHGAGCGCKISPKVLETILHSEQAKFVDPNLLVGNETSDDAAVYDLGNG
CCCEEEEEECCCCCCCCCEECHHHHHHHHHCCCCCCCCCCEEECCCCCCCCEEEECCCC
TSIVSTTDFFMPIVDNPFDFGRIAATNAISDIFAMGGKPIMAIAILGWPINTLAPEIARE
CEEEEEHHEEHCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHH
VVEGGRFACQQAGIALAGGHSIDAPEPIFGLAVTGVVPTERIKKNSTAQAGCKLYLTKPL
HHHCCHHHHHHCCEEEECCCCCCCCCCCEEEEEECCCCHHHHHCCCCCCCCEEEEEECCC
GIGVLTTAEKKSLLKPEHQGLATETMCQMNLAGAAFAAIDGVKAMTDVTGFGLLGHLSEV
CCEEEECHHHHHHCCCHHCCCHHHHHHHHHHCHHHHHHHHCHHHHHHHHHHHHHHHHHHH
CRGAGVQAQLRYADIPKLPGVEDYIAAGAVPGGTGRNFASYGHLMGEMPTEWRDLLCDPQ
HHCCCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHCCCCC
TSGGLLLAVTPEAEAEVQAAAAEFGIKLAAIGELVTARGGRPMIEIR
CCCCEEEEECCCCHHHHHHHHHHHCEEHHHHHHHHHCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA