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The map label for this gene is quuQ [H]

Identifier: 238894206

GI number: 238894206

Start: 2107511

End: 2108341

Strand: Direct

Name: quuQ [H]

Synonym: KP1_2171

Alternate gene names: 238894206

Gene position: 2107511-2108341 (Clockwise)

Preceding gene: 238894205

Following gene: 238894208

Centisome position: 40.15

GC content: 50.42

Gene sequence:

>831_bases
ATGAATATCGAATCAATTCCAAAATTCTTTGCCCCGAAAGGAATGCATATTTCAGATAGCGGGAGAGCAACTGCCAGCGA
ACAACTCACCGTAACTGACGTTATGGCTGCGCTGGGGATGACGCAGGCCGAAGCGGGGAGCGGATTATCCATGTTCCTGG
GTAAGGCTGGCATCAGCGAGAATGACCGCATGGCCTCAATTCACTGGTTGGCCGAATATGCAAAGAAGAATGCTCCCCGC
TCAGTCAGGAAAGCCGCCGGCAAGAAATTTCCTCTTTGCATGCTGATCATCGCCAGGTTCGCATATCACGACTACGCCTC
ATCAGCTGCGGATACTACGGACTGTACGAAATGCGCAGGTAAGGGGTTCGTGAAGAAAGTTAAAATGGTCGAGAAAAGCC
ACTACACAATGAGATTACCCCAATGGGCAAAAGACCTCAGGCAGTCACCTTCGGATTTCGAGGTTAAGCGGCAGGTGCAG
GAAGTCGATCACGTACTTTGTGTGAAATGCCATGGCACCGGGAAAATCAGTAAGCGCTGCCAGTGCAGCGGGACGGGGAA
GACACTTGACCGCAAAGAATCCGAACTTCAGGGAGTGCCTGTCTACAAGACATGTAAGCGTTGTGAAGGCCGCGGGTTTA
GCAGGCCAAAATCCTCCAACGCATACCGCGGCATCCTTTCAGAGCTACCTGGCTTGCCGGAGCGTACCTGGCGTTATAGC
TGGAAACCTTTTTATGAAAGCCTGGTGACCAAATGTTTTATGGAGGAGAGTTTTACTGATGCTCAACTCCGGCGAGTTAC
AAAAACGACTAATTTGATAAATTTCGCATGA

Upstream 100 bases:

>100_bases
AGAGAAGTATGGTTCGCAGCTGGAGCTGCTAATCCGTTTTCTTGATCGTGCGCTTGGCATTGGCGTCATTTTTAAAGAAT
AAGTGTATGGAGTGCTGAGC

Downstream 100 bases:

>100_bases
AATAGCGACACGATACTTGCAAAGTTGCCGTTTTTGTGTAAATTTAATCTTAACGATGGGCATTGTATGTTCAACGTTAT
CAAACCCGCCTCCGAGCGGG

Product: putative prophage antitermination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MNIESIPKFFAPKGMHISDSGRATASEQLTVTDVMAALGMTQAEAGSGLSMFLGKAGISENDRMASIHWLAEYAKKNAPR
SVRKAAGKKFPLCMLIIARFAYHDYASSAADTTDCTKCAGKGFVKKVKMVEKSHYTMRLPQWAKDLRQSPSDFEVKRQVQ
EVDHVLCVKCHGTGKISKRCQCSGTGKTLDRKESELQGVPVYKTCKRCEGRGFSRPKSSNAYRGILSELPGLPERTWRYS
WKPFYESLVTKCFMEESFTDAQLRRVTKTTNLINFA

Sequences:

>Translated_276_residues
MNIESIPKFFAPKGMHISDSGRATASEQLTVTDVMAALGMTQAEAGSGLSMFLGKAGISENDRMASIHWLAEYAKKNAPR
SVRKAAGKKFPLCMLIIARFAYHDYASSAADTTDCTKCAGKGFVKKVKMVEKSHYTMRLPQWAKDLRQSPSDFEVKRQVQ
EVDHVLCVKCHGTGKISKRCQCSGTGKTLDRKESELQGVPVYKTCKRCEGRGFSRPKSSNAYRGILSELPGLPERTWRYS
WKPFYESLVTKCFMEESFTDAQLRRVTKTTNLINFA
>Mature_276_residues
MNIESIPKFFAPKGMHISDSGRATASEQLTVTDVMAALGMTQAEAGSGLSMFLGKAGISENDRMASIHWLAEYAKKNAPR
SVRKAAGKKFPLCMLIIARFAYHDYASSAADTTDCTKCAGKGFVKKVKMVEKSHYTMRLPQWAKDLRQSPSDFEVKRQVQ
EVDHVLCVKCHGTGKISKRCQCSGTGKTLDRKESELQGVPVYKTCKRCEGRGFSRPKSSNAYRGILSELPGLPERTWRYS
WKPFYESLVTKCFMEESFTDAQLRRVTKTTNLINFA

Specific function: Positively regulate expression of some phage genes. Bacterial host RNA polymerase modified by antitermination proteins transcribes through termination sites that otherwise prevent expression of the regulated genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage antitermination Q type 2 family [H]

Homologues:

Organism=Escherichia coli, GI87081935, Length=273, Percent_Identity=35.8974358974359, Blast_Score=165, Evalue=3e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003222
- InterPro:   IPR001305 [H]

Pfam domain/function: PF03589 Antiterm [H]

EC number: NA

Molecular weight: Translated: 30866; Mature: 30866

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIESIPKFFAPKGMHISDSGRATASEQLTVTDVMAALGMTQAEAGSGLSMFLGKAGISE
CCHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHCCCHHHCCCCHHHHHHCCCCCC
NDRMASIHWLAEYAKKNAPRSVRKAAGKKFPLCMLIIARFAYHDYASSAADTTDCTKCAG
CCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
KGFVKKVKMVEKSHYTMRLPQWAKDLRQSPSDFEVKRQVQEVDHVLCVKCHGTGKISKRC
HHHHHHHHHHHHCCCEEECHHHHHHHHCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCCE
QCSGTGKTLDRKESELQGVPVYKTCKRCEGRGFSRPKSSNAYRGILSELPGLPERTWRYS
ECCCCCCCCHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCHHHCCC
WKPFYESLVTKCFMEESFTDAQLRRVTKTTNLINFA
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNIESIPKFFAPKGMHISDSGRATASEQLTVTDVMAALGMTQAEAGSGLSMFLGKAGISE
CCHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHCCCHHHCCCCHHHHHHCCCCCC
NDRMASIHWLAEYAKKNAPRSVRKAAGKKFPLCMLIIARFAYHDYASSAADTTDCTKCAG
CCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
KGFVKKVKMVEKSHYTMRLPQWAKDLRQSPSDFEVKRQVQEVDHVLCVKCHGTGKISKRC
HHHHHHHHHHHHCCCEEECHHHHHHHHCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCCE
QCSGTGKTLDRKESELQGVPVYKTCKRCEGRGFSRPKSSNAYRGILSELPGLPERTWRYS
ECCCCCCCCHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCHHHCCC
WKPFYESLVTKCFMEESFTDAQLRRVTKTTNLINFA
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]