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The map label for this gene is yfdM [H]

Identifier: 238894200

GI number: 238894200

Start: 2101300

End: 2102682

Strand: Direct

Name: yfdM [H]

Synonym: KP1_2165

Alternate gene names: 238894200

Gene position: 2101300-2102682 (Clockwise)

Preceding gene: 238894199

Following gene: 238894201

Centisome position: 40.04

GC content: 53.29

Gene sequence:

>1383_bases
GTGCATCGACTGAACACGACCAGCGAAGGGGAAATGCTGGTGGATGAGGCCGTACTCCCAATCACCAGAAGCCAATACTG
TGATGCTCTGGATGCATTACGTGCTGCCCCTGCCCATTATCTCAAGGAGGTGGGCGACCAGTGGAGAACGCCCGATATGT
TGTTCTGGGGGGTTAACGCTATGTATGGCCCGCTGGTGCTGGACCTCTTTGCAGACGAAACCAACGCAAAATGCCCTGCG
TGGTACTCAGCAGAAGACAATGCCCTGACGCAGGACTGGGCGGGGCGACTGATAGAACTCGGCGGCGCGGCATTTGGAAA
TCCGCCGTATAGCCGTTCTCAGTATCACGAAAAGCAGGCGATCACAGGCATGACCCACATCATGAGTTATGCATCCGCTC
AGCGCGAAAATGGCGGTCGTTATGTCTTTCTGGTGAAGTCAGCGACGAGTGAGACGTGGTGGCCAGAAGATGCGGATCAT
GTCTGTTTTATCCGCGGTCGCATCGGTTTCGATCTTCCTACCTGGTTTAAGCCGGCGGACGATAAGCAGAAGCCGACCAG
TGCCTTCTTTGCCGGGGCGATTGTTGTATTTGATAAGTCATGGCGAGGGGAGCGCTTTAGCTATATCGATCGTGTGGCTC
TTGAAGCCAAGGGGCGCGCGAGTATGGCCCTGGCCCAGTACGCCGTGGGTAAACAGGCAACAGCTCCAGTAATGGATCAG
CCTCAGACAGAGCAAGCTGAAACTGAAATCCCATTTCTTCAGGACGAAATCCTCGCGAAAAGCGGCATACGATCCTGGGC
TTGCGTGGTTGCGGCTTTTGGAGATAAAGCCGAGTACACCTTTGCCGAGTCGAAGTTTGGTCATACCTGGGCGGCTGATT
CAGTGGATAAACCGGAGTTTACGCCGGTTAAATCAGAAACGATCGCCACAGCTCAATCCCTGATCATCAAACAAACTGCG
AAACAAGTGCTGGTGGGCTGGCTTAACGGTGTTGATTTTGGATCCGCAACTGCACGTGAAGAAACCATAGAACGCATGAA
TTCGGTGTATGCAGAGTTTATCGACACATGCCCGGTCACTGAGTTCATCGATATTGTTGGCAGCCTGGATAAAGCGAGCT
GGTTCAACAGCAGACTGATCCGCAGCCATGTTCGGGAAGCTCTCTCAGTTGCCAAACAGACCTTACCCGAAAGCCGGATA
TGGCCACTGGAAGTCGGCCTGGTATTTGAGCGAGTCGAAGGCGTGAATCATCTTAACGAGTCTCAGCAAAACAAGCTGAA
GGCACACATCAATCAGCTGTGGCTTGAGCGTACGCCCAGTACCGAAATCATAACTATTGCCAGCCGACTGGTCAGCAGTA
TGCAGGGGGTTAGCCATGCGTGA

Upstream 100 bases:

>100_bases
AGTATTACATTCGTCAGAAAAATGCCTGCCTCCGGAAAGCACGCATGGGGAAATCACACACTGAGTGTCTGTTAGCCGGG
AATTACTGCGGAGGTGATCT

Downstream 100 bases:

>100_bases
AATTATCGTTGATAACTTTGCCGGAGGCGGCGGCGCTTCTACCGGGATTGAGATGGCTATTGGGCGTAGTGTCGATATTG
CCATTAATCATGATGAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 460; Mature: 460

Protein sequence:

>460_residues
MHRLNTTSEGEMLVDEAVLPITRSQYCDALDALRAAPAHYLKEVGDQWRTPDMLFWGVNAMYGPLVLDLFADETNAKCPA
WYSAEDNALTQDWAGRLIELGGAAFGNPPYSRSQYHEKQAITGMTHIMSYASAQRENGGRYVFLVKSATSETWWPEDADH
VCFIRGRIGFDLPTWFKPADDKQKPTSAFFAGAIVVFDKSWRGERFSYIDRVALEAKGRASMALAQYAVGKQATAPVMDQ
PQTEQAETEIPFLQDEILAKSGIRSWACVVAAFGDKAEYTFAESKFGHTWAADSVDKPEFTPVKSETIATAQSLIIKQTA
KQVLVGWLNGVDFGSATAREETIERMNSVYAEFIDTCPVTEFIDIVGSLDKASWFNSRLIRSHVREALSVAKQTLPESRI
WPLEVGLVFERVEGVNHLNESQQNKLKAHINQLWLERTPSTEIITIASRLVSSMQGVSHA

Sequences:

>Translated_460_residues
MHRLNTTSEGEMLVDEAVLPITRSQYCDALDALRAAPAHYLKEVGDQWRTPDMLFWGVNAMYGPLVLDLFADETNAKCPA
WYSAEDNALTQDWAGRLIELGGAAFGNPPYSRSQYHEKQAITGMTHIMSYASAQRENGGRYVFLVKSATSETWWPEDADH
VCFIRGRIGFDLPTWFKPADDKQKPTSAFFAGAIVVFDKSWRGERFSYIDRVALEAKGRASMALAQYAVGKQATAPVMDQ
PQTEQAETEIPFLQDEILAKSGIRSWACVVAAFGDKAEYTFAESKFGHTWAADSVDKPEFTPVKSETIATAQSLIIKQTA
KQVLVGWLNGVDFGSATAREETIERMNSVYAEFIDTCPVTEFIDIVGSLDKASWFNSRLIRSHVREALSVAKQTLPESRI
WPLEVGLVFERVEGVNHLNESQQNKLKAHINQLWLERTPSTEIITIASRLVSSMQGVSHA
>Mature_460_residues
MHRLNTTSEGEMLVDEAVLPITRSQYCDALDALRAAPAHYLKEVGDQWRTPDMLFWGVNAMYGPLVLDLFADETNAKCPA
WYSAEDNALTQDWAGRLIELGGAAFGNPPYSRSQYHEKQAITGMTHIMSYASAQRENGGRYVFLVKSATSETWWPEDADH
VCFIRGRIGFDLPTWFKPADDKQKPTSAFFAGAIVVFDKSWRGERFSYIDRVALEAKGRASMALAQYAVGKQATAPVMDQ
PQTEQAETEIPFLQDEILAKSGIRSWACVVAAFGDKAEYTFAESKFGHTWAADSVDKPEFTPVKSETIATAQSLIIKQTA
KQVLVGWLNGVDFGSATAREETIERMNSVYAEFIDTCPVTEFIDIVGSLDKASWFNSRLIRSHVREALSVAKQTLPESRI
WPLEVGLVFERVEGVNHLNESQQNKLKAHINQLWLERTPSTEIITIASRLVSSMQGVSHA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008593 [H]

Pfam domain/function: PF05869 Dam [H]

EC number: NA

Molecular weight: Translated: 51333; Mature: 51333

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: PS00061 ADH_SHORT ; PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRLNTTSEGEMLVDEAVLPITRSQYCDALDALRAAPAHYLKEVGDQWRTPDMLFWGVNA
CCCCCCCCCCCEEHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEEECHHH
MYGPLVLDLFADETNAKCPAWYSAEDNALTQDWAGRLIELGGAAFGNPPYSRSQYHEKQA
HHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
ITGMTHIMSYASAQRENGGRYVFLVKSATSETWWPEDADHVCFIRGRIGFDLPTWFKPAD
HHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC
DKQKPTSAFFAGAIVVFDKSWRGERFSYIDRVALEAKGRASMALAQYAVGKQATAPVMDQ
CCCCCHHHHHHEEEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCC
PQTEQAETEIPFLQDEILAKSGIRSWACVVAAFGDKAEYTFAESKFGHTWAADSVDKPEF
CCCCHHHCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEHHCCCCCCCCCCCCCCCCC
TPVKSETIATAQSLIIKQTAKQVLVGWLNGVDFGSATAREETIERMNSVYAEFIDTCPVT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHH
EFIDIVGSLDKASWFNSRLIRSHVREALSVAKQTLPESRIWPLEVGLVFERVEGVNHLNE
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHCH
SQQNKLKAHINQLWLERTPSTEIITIASRLVSSMQGVSHA
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MHRLNTTSEGEMLVDEAVLPITRSQYCDALDALRAAPAHYLKEVGDQWRTPDMLFWGVNA
CCCCCCCCCCCEEHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEEECHHH
MYGPLVLDLFADETNAKCPAWYSAEDNALTQDWAGRLIELGGAAFGNPPYSRSQYHEKQA
HHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
ITGMTHIMSYASAQRENGGRYVFLVKSATSETWWPEDADHVCFIRGRIGFDLPTWFKPAD
HHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC
DKQKPTSAFFAGAIVVFDKSWRGERFSYIDRVALEAKGRASMALAQYAVGKQATAPVMDQ
CCCCCHHHHHHEEEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCC
PQTEQAETEIPFLQDEILAKSGIRSWACVVAAFGDKAEYTFAESKFGHTWAADSVDKPEF
CCCCHHHCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEHHCCCCCCCCCCCCCCCCC
TPVKSETIATAQSLIIKQTAKQVLVGWLNGVDFGSATAREETIERMNSVYAEFIDTCPVT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHH
EFIDIVGSLDKASWFNSRLIRSHVREALSVAKQTLPESRIWPLEVGLVFERVEGVNHLNE
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHCH
SQQNKLKAHINQLWLERTPSTEIITIASRLVSSMQGVSHA
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503; 3532033 [H]