Click here to switch to the map view.

The map label for this gene is yccJ [H]

Identifier: 238894065

GI number: 238894065

Start: 1965688

End: 1965915

Strand: Reverse

Name: yccJ [H]

Synonym: KP1_2014

Alternate gene names: 238894065

Gene position: 1965915-1965688 (Counterclockwise)

Preceding gene: 238894066

Following gene: 238894063

Centisome position: 37.46

GC content: 53.07

Gene sequence:

>228_bases
ATGCCAACTCAAGAAGCAAAAGCACATCGCGTCGGCGAATGGGCAAGTTTACGTAACACCTCACCGGAAATTGCCGAGGC
GATTTTCGAAGTCGCCCACTACGATGAGAAACTGGCGGAGCAAATCTGGGAGGAAGGCAGCGACGAAGTGCTGGCGCTGG
CCTTTGCCAAAACCGATAAAGACAGCCTGTTCTGGGGCGAACAGACGATTGAGCGTAAAAACGTCTAG

Upstream 100 bases:

>100_bases
AGCCGAGCGAGGAAGAGTTAGCCATCGCCCGCTATCAGGGTGAACATGTCGCCAAACTGGCCGTTAAACTGCACGGCTAA
TCTTCTGCAGGAGGAGCACT

Downstream 100 bases:

>100_bases
GAGGTTTATCCCCACCTGGGCTCACCCTAACCTGCTAAAAAAACCCGGAGTGCTCCGGGTTTTTTTCGTTATTTCGCCGC
CTCGTTGATCACCTTTTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 75; Mature: 74

Protein sequence:

>75_residues
MPTQEAKAHRVGEWASLRNTSPEIAEAIFEVAHYDEKLAEQIWEEGSDEVLALAFAKTDKDSLFWGEQTIERKNV

Sequences:

>Translated_75_residues
MPTQEAKAHRVGEWASLRNTSPEIAEAIFEVAHYDEKLAEQIWEEGSDEVLALAFAKTDKDSLFWGEQTIERKNV
>Mature_74_residues
PTQEAKAHRVGEWASLRNTSPEIAEAIFEVAHYDEKLAEQIWEEGSDEVLALAFAKTDKDSLFWGEQTIERKNV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787238, Length=75, Percent_Identity=92, Blast_Score=141, Evalue=9e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8563; Mature: 8431

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTQEAKAHRVGEWASLRNTSPEIAEAIFEVAHYDEKLAEQIWEEGSDEVLALAFAKTDK
CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHCCCCCC
DSLFWGEQTIERKNV
CCCCCCHHHHHHCCC
>Mature Secondary Structure 
PTQEAKAHRVGEWASLRNTSPEIAEAIFEVAHYDEKLAEQIWEEGSDEVLALAFAKTDK
CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHCCCCCC
DSLFWGEQTIERKNV
CCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]