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The map label for this gene is ycbX [H]

Identifier: 238894003

GI number: 238894003

Start: 1899149

End: 1900258

Strand: Reverse

Name: ycbX [H]

Synonym: KP1_1948

Alternate gene names: 238894003

Gene position: 1900258-1899149 (Counterclockwise)

Preceding gene: 238894009

Following gene: 238894000

Centisome position: 36.21

GC content: 60.36

Gene sequence:

>1110_bases
ATGGTAACGCTATCGCGACTTTTTATTCATCCTGTTAAATCCATGCGCGGCATGGGCCTGACCCACGCCTTTGCTGATAT
CAGCGGCCTGGCCTTCGATCGCCTGTTTATGGTCACCGAAACCGACGGGACCTTTATTACCGCTCGCCAGTTTCCGCAAA
TGGTGAAATTTATTCCGGCGCCGCTGCATGATGGCCTTCACCTGACCGCACCGGACGGCAGCAGCGCCGTGGTGCGTTTT
AGCGATTTCGCCACGCAGGCCGAGCCGACCGAAGTCTGGGGCAACCATTTTACCGCCCTCATCGCGCCCGCCGCCGTTAA
CCAGTGGCTCAGCGGCTTTTTCAAGCGCGATGTCCAGCTGCGCTGGCTGGGGCCGCAGCTAACCCGCCGGGTAAAGCGCC
ATGATGCGGTGCCGCTCTCCTTCGCCGACGGCTACCCTTACCTGCTGGCTAACGAGGCCTCCCTGCGCGATCTGCAACAG
CGCTGCCCGGCCAGCGTAAGCATAGAACAGTTTCGCCCTAACCTTGTGGTCACCGGCGCGGCGGCCTGGGATGAAGATAG
CTGGAAAGTGATCCGCATCGGCGAGGTGGTGTTTGATGTCGCTAAGCCGTGCAGCCGCTGCATTTTTACCACCGTCAGCC
CGGAGCGCGGTCAGAAGCATCCTGCCGGGGAGCCGCTGGAAACCTTAAAGCGTTTTCGTACCGCGCTGGACAATGGCGAT
GTCGATTTTGGCCAGAACCTGATTGCCCGCAACAGCGGGGTGATCCGGGTGGGAGATGAAGTGGAAATCCTTACCCGCGG
CCCGGCGAAAGCCTACGGGGCAGGTGAAAGCGACGATACCCCGGCTCCCGAGGCGCAGCAGCAGGCTACGGTTGCCATCG
AATGGCAGGGTCAACAGTTTACCGGCAATAACCAGCAGGTGCTGCTGGAGCAACTGGAACAACAGGGCATTCGCGTACCC
TATTCGTGTCGGGCGGGGATCTGCGGCAGCTGCCGCATCCGGCTGGAAGAGGGAGAAGTGAGTCCGTTAAAGAAAAACGC
GGTTGCCGGAGATGGCACTATTCTCGCCTGCAGCTGTGTACCGAAAACAGCGCTACGCCTGGCGCCTTAA

Upstream 100 bases:

>100_bases
TATCGTCACTTTTACTTAAAGAAAATTGGTGCGCATTATAGCCAATATGTGCCCTATGTCATAAAGTTATAGGCTTATTT
TTGGAACCCGGAGGCAGCGT

Downstream 100 bases:

>100_bases
ACCGCCTGCCCCAGACTGTAGCTGACCGCGCTCTGCGCCGGCTGCAGTCTGTCATTCATGATTTTAATGACATCGCCCAG
CTGCATGACGCGGCCGGCAA

Product: putative Fe-S protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MVTLSRLFIHPVKSMRGMGLTHAFADISGLAFDRLFMVTETDGTFITARQFPQMVKFIPAPLHDGLHLTAPDGSSAVVRF
SDFATQAEPTEVWGNHFTALIAPAAVNQWLSGFFKRDVQLRWLGPQLTRRVKRHDAVPLSFADGYPYLLANEASLRDLQQ
RCPASVSIEQFRPNLVVTGAAAWDEDSWKVIRIGEVVFDVAKPCSRCIFTTVSPERGQKHPAGEPLETLKRFRTALDNGD
VDFGQNLIARNSGVIRVGDEVEILTRGPAKAYGAGESDDTPAPEAQQQATVAIEWQGQQFTGNNQQVLLEQLEQQGIRVP
YSCRAGICGSCRIRLEEGEVSPLKKNAVAGDGTILACSCVPKTALRLAP

Sequences:

>Translated_369_residues
MVTLSRLFIHPVKSMRGMGLTHAFADISGLAFDRLFMVTETDGTFITARQFPQMVKFIPAPLHDGLHLTAPDGSSAVVRF
SDFATQAEPTEVWGNHFTALIAPAAVNQWLSGFFKRDVQLRWLGPQLTRRVKRHDAVPLSFADGYPYLLANEASLRDLQQ
RCPASVSIEQFRPNLVVTGAAAWDEDSWKVIRIGEVVFDVAKPCSRCIFTTVSPERGQKHPAGEPLETLKRFRTALDNGD
VDFGQNLIARNSGVIRVGDEVEILTRGPAKAYGAGESDDTPAPEAQQQATVAIEWQGQQFTGNNQQVLLEQLEQQGIRVP
YSCRAGICGSCRIRLEEGEVSPLKKNAVAGDGTILACSCVPKTALRLAP
>Mature_369_residues
MVTLSRLFIHPVKSMRGMGLTHAFADISGLAFDRLFMVTETDGTFITARQFPQMVKFIPAPLHDGLHLTAPDGSSAVVRF
SDFATQAEPTEVWGNHFTALIAPAAVNQWLSGFFKRDVQLRWLGPQLTRRVKRHDAVPLSFADGYPYLLANEASLRDLQQ
RCPASVSIEQFRPNLVVTGAAAWDEDSWKVIRIGEVVFDVAKPCSRCIFTTVSPERGQKHPAGEPLETLKRFRTALDNGD
VDFGQNLIARNSGVIRVGDEVEILTRGPAKAYGAGESDDTPAPEAQQQATVAIEWQGQQFTGNNQQVLLEQLEQQGIRVP
YSCRAGICGSCRIRLEEGEVSPLKKNAVAGDGTILACSCVPKTALRLAP

Specific function: Unknown

COG id: COG3217

COG function: function code R; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MOSC domain [H]

Homologues:

Organism=Homo sapiens, GI224600454, Length=281, Percent_Identity=33.0960854092527, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI31542713, Length=283, Percent_Identity=30.7420494699647, Blast_Score=113, Evalue=3e-25,
Organism=Homo sapiens, GI157388923, Length=316, Percent_Identity=23.7341772151899, Blast_Score=81, Evalue=1e-15,
Organism=Escherichia coli, GI1787179, Length=368, Percent_Identity=80.7065217391304, Blast_Score=634, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17540702, Length=282, Percent_Identity=29.4326241134752, Blast_Score=120, Evalue=8e-28,
Organism=Caenorhabditis elegans, GI17561286, Length=256, Percent_Identity=29.296875, Blast_Score=105, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI71990971, Length=263, Percent_Identity=28.5171102661597, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI45550400, Length=287, Percent_Identity=27.1777003484321, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI17647607, Length=250, Percent_Identity=28.4, Blast_Score=83, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041
- InterPro:   IPR005302
- InterPro:   IPR005303
- InterPro:   IPR011037 [H]

Pfam domain/function: PF00111 Fer2; PF03473 MOSC; PF03476 MOSC_N [H]

EC number: NA

Molecular weight: Translated: 40443; Mature: 40443

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTLSRLFIHPVKSMRGMGLTHAFADISGLAFDRLFMVTETDGTFITARQFPQMVKFIPA
CEEHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEEEEEECCCCEEEHHHHHHHHHHCCC
PLHDGLHLTAPDGSSAVVRFSDFATQAEPTEVWGNHFTALIAPAAVNQWLSGFFKRDVQL
CCCCCCEEECCCCCCEEEEEECCCCCCCCHHHHCCCCEEEHHHHHHHHHHHHHHHCCCEE
RWLGPQLTRRVKRHDAVPLSFADGYPYLLANEASLRDLQQRCPASVSIEQFRPNLVVTGA
EEECHHHHHHHHHHCCCCEEECCCCCEEEECCHHHHHHHHHCCCCCCHHHCCCCEEEEEE
AAWDEDSWKVIRIGEVVFDVAKPCSRCIFTTVSPERGQKHPAGEPLETLKRFRTALDNGD
CCCCCCCEEEEEEHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCC
VDFGQNLIARNSGVIRVGDEVEILTRGPAKAYGAGESDDTPAPEAQQQATVAIEWQGQQF
CCCCCHHHHCCCCEEEECCCEEEEECCCCHHCCCCCCCCCCCCCCCCCCEEEEEECCCEE
TGNNQQVLLEQLEQQGIRVPYSCRAGICGSCRIRLEEGEVSPLKKNAVAGDGTILACSCV
CCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHCCCCCCCCEEEEECC
PKTALRLAP
CCCHHCCCC
>Mature Secondary Structure
MVTLSRLFIHPVKSMRGMGLTHAFADISGLAFDRLFMVTETDGTFITARQFPQMVKFIPA
CEEHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEEEEEECCCCEEEHHHHHHHHHHCCC
PLHDGLHLTAPDGSSAVVRFSDFATQAEPTEVWGNHFTALIAPAAVNQWLSGFFKRDVQL
CCCCCCEEECCCCCCEEEEEECCCCCCCCHHHHCCCCEEEHHHHHHHHHHHHHHHCCCEE
RWLGPQLTRRVKRHDAVPLSFADGYPYLLANEASLRDLQQRCPASVSIEQFRPNLVVTGA
EEECHHHHHHHHHHCCCCEEECCCCCEEEECCHHHHHHHHHCCCCCCHHHCCCCEEEEEE
AAWDEDSWKVIRIGEVVFDVAKPCSRCIFTTVSPERGQKHPAGEPLETLKRFRTALDNGD
CCCCCCCEEEEEEHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCC
VDFGQNLIARNSGVIRVGDEVEILTRGPAKAYGAGESDDTPAPEAQQQATVAIEWQGQQF
CCCCCHHHHCCCCEEEECCCEEEEECCCCHHCCCCCCCCCCCCCCCCCCEEEEEECCCEE
TGNNQQVLLEQLEQQGIRVPYSCRAGICGSCRIRLEEGEVSPLKKNAVAGDGTILACSCV
CCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHCCCCCCCCEEEEECC
PKTALRLAP
CCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]