| Definition | Klebsiella pneumoniae NTUH-K2044 chromosome, complete genome. |
|---|---|
| Accession | NC_012731 |
| Length | 5,248,520 |
Click here to switch to the map view.
The map label for this gene is ycaI [H]
Identifier: 238893969
GI number: 238893969
Start: 1857882
End: 1860305
Strand: Direct
Name: ycaI [H]
Synonym: KP1_1913
Alternate gene names: 238893969
Gene position: 1857882-1860305 (Clockwise)
Preceding gene: 238893968
Following gene: 238893970
Centisome position: 35.4
GC content: 62.67
Gene sequence:
>2424_bases GTGCTTTTTTTGTGCCCGCCATTTACGGCCATCCTCACAAAAAAAGCGTGCCCGGCTGCAAGCGAGGCGATTGTCTGGAA TGCGCCGCGCAAGCCTGAATTCGCCGCCAGGACGCCAGCACCGCTTTGCGTAACACTGCCCACTCACAGGGAGGTGTTTA TGCGTCTACCATGGCTTGCCGGATGCGCCATCATTGCAATGCTGCCGCTTCTCTGGCTACCCGTTTTGCCGGGCCCGTGC AGTCTGGCGGGCGCGAGCGCACTGGCGCTGGCGCTGATTCGTCTGCATGGAAGGGCCGTCGCCGGAGTGGCGATGACGCT TCTGCTGGTGGTCTGGGGAGTATTGAGCGCGCATCAGGCGCTGTGGCCGACCCGGCACCTTACCGGCGCCATCCGGCAAG CGGAAGTGATCCTTAGCGAGACGGATGGCCAGACCTTGCACCGAGGACAGATGGTGCGCCTGCGGGGCCGCTATCTGTTT CCCCCGGTAGGCGTAACGCTGTACGGGGAACTTGCACCTGCGCCAGCCTGTGCGGGTCAACACTGGCTGATGACGCTGCG CCTGCGCCCGGTGCACGGGCAGCTCAATGACGGGGGCTTCGACAGCCAGCGCTATGCGCTGGCGCAGCACCGACCGCTGA GCGGAGGGATCGTCGCCGCTTCCGCGCTGGATGCCCGCTGCAGTCTGCGCGCCCGCTATCTGACGTCGCTGACCCGGCGA CTGCAGACTTATCCCTGGCGCGCGGTGATGTTGGGATTAGGAATGGGGGAGCGGCTGTCTCTGCCGACGGAGATAAAGGT CCTGATGCAGAACACGGGCACTTCCCATCTGATGGCTATCTCGGGTCTGCATATCGCTCTCGCGGCTTCTCTTATCATGC TGTTGCTGCGCGGCGTGCAGTATATTCTCCCGGGCCGCTGGATTGGCTGGCGGTTGCCCCTTGTCGCCGGGCTGGCGGGC GCCGTCGGCTATGCCTGGCTGACCGGTATGCAGCCGCCGGCCCTGCGCACTTGCTTAGGGCTTGCGGTCTGTTGTGCTTT ACGTTTGTCGGGTCAACGCTGGACGGCGTGGCAGGTGTGGCTCTGCTGTCTGGGAGCGATACTGGTTGCCGACCCGCTGG CGGTCCTGTCGCAAAGCCTGTGGCTATCTGCCTTCGCCGTGGCGGGGCTGATCTTCTGGTTCCAGTGGCTCCCGTTGCCT GCCGGCCGCTGGCGCTGGCCGTGGAAGACCATAATTGCTCTTGTTCATTTGCAGGCTGGCGTGACGCTGCTGCTGCTGCC GCTGCAGTTGTTGCTATTCCATGGCATAAGCCTGACGTCGATGGCGGCTAATTTGCTGGCGGTACCGTTAGTCACCCTGT TGGCGGTGCCGCTTATTCTGACCGCGATGCTGGTGCATCTCTCGGGGCCGGAGTTAGTGGAGTCGCTACTCTGGCTGGCG GCCGATCGCGTGCTGGCGCTACTGTTTTGGGGATTACGACGTTTACCGGACGGCTGGTTGATGCTGGATACTCGCTGGCT GTGGATCAGTATCCTGCCGTGGCTGTTGGTGATGGGCTGGCGTTTTCAGAGCTGGCGGCATTCACCGGCGCTGTGTCTCA GCGTGCTGTTTTTACTGACGCGGCCATTCAGCCGACAACCGCCTGCGGACGAATGGCGGGTGACGATGCTGGATGTCGGA CAGGGGCTGGCGATGGTGATCGAGCGTCACGGTAAGGCATTGCTTTACGATACCGGGCCGGCTTGGCCGCAGGGTGATAG CGGTCAACAGGTGATTATCCCGTGGCTGCGCTGGCACCATCTGCAGCTGCAAGGGATTATGCTGAGCCATGAACATCTGG ATCATCGCGGCGGCCTTGATTCAGTGCTGCAGGCATGGCCGCAGGCGTGGGTGCGCAGCCCGTTAGGCTGGGCGCATCAT CTGCCGTGTCATCGCGGTGAGCGCTGGCAATGGCAGGGACTCAACTTCCAGGCCCTGTGGCCGCTACCGGGCAGCACGGC AAAGGGTAACAATCATTCCTGTGTGGTGCGGATCGATGATGGTCGCTCCAGCATCCTGCTCACCGGCGATATAGAACGTC AGGCGGAGCAGGCGATGATCAGCCGTTACTGGCGGCATCTGACGTCTACACTTATTCAGGTTCCCCACCACGGCAGCAAT ACCTCCTCCAGCGCGCTGCTGGTCCGCCGGGTGGATGGCGCGGCCGCGCTGGCCTCCGCTTCGCGCTACAATGCGTGGCG GATGCCCTCGTACAAGGTGGTTCAGCGCTACCGCCAGCGGGGTTATCGCTGGTTCGCCACGCCGCAGCAGGGGCAGATAA CGGTGGTTTTTTCCGCAGAAGGGTGGCAAATCCATAGCTTACGGGATCAAGTTTTACCGCGTTGGTATCATCAGTGGTTT GGCGCGCCCGCCGATAACGGGTAG
Upstream 100 bases:
>100_bases CACTTTAAGCCCGGGAAAGAATTACGTGACCGCGCCAATATTTATGAAGGGTGAGTTGCACGACGTGCAGCCTGCCTGAC GATAAAGAAAGCACCTTCGG
Downstream 100 bases:
>100_bases AATATGCGGCTATTTCAACACAAGCTGGTTTATTGAATGCAGAACGATAAAGATCTCTCCACGTGGCAGACCTTCCGCCG ACTTTGGCCGATTATCGCGC
Product: putative recombination protein with metallo-hydrolase domain
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 807; Mature: 807
Protein sequence:
>807_residues MLFLCPPFTAILTKKACPAASEAIVWNAPRKPEFAARTPAPLCVTLPTHREVFMRLPWLAGCAIIAMLPLLWLPVLPGPC SLAGASALALALIRLHGRAVAGVAMTLLLVVWGVLSAHQALWPTRHLTGAIRQAEVILSETDGQTLHRGQMVRLRGRYLF PPVGVTLYGELAPAPACAGQHWLMTLRLRPVHGQLNDGGFDSQRYALAQHRPLSGGIVAASALDARCSLRARYLTSLTRR LQTYPWRAVMLGLGMGERLSLPTEIKVLMQNTGTSHLMAISGLHIALAASLIMLLLRGVQYILPGRWIGWRLPLVAGLAG AVGYAWLTGMQPPALRTCLGLAVCCALRLSGQRWTAWQVWLCCLGAILVADPLAVLSQSLWLSAFAVAGLIFWFQWLPLP AGRWRWPWKTIIALVHLQAGVTLLLLPLQLLLFHGISLTSMAANLLAVPLVTLLAVPLILTAMLVHLSGPELVESLLWLA ADRVLALLFWGLRRLPDGWLMLDTRWLWISILPWLLVMGWRFQSWRHSPALCLSVLFLLTRPFSRQPPADEWRVTMLDVG QGLAMVIERHGKALLYDTGPAWPQGDSGQQVIIPWLRWHHLQLQGIMLSHEHLDHRGGLDSVLQAWPQAWVRSPLGWAHH LPCHRGERWQWQGLNFQALWPLPGSTAKGNNHSCVVRIDDGRSSILLTGDIERQAEQAMISRYWRHLTSTLIQVPHHGSN TSSSALLVRRVDGAAALASASRYNAWRMPSYKVVQRYRQRGYRWFATPQQGQITVVFSAEGWQIHSLRDQVLPRWYHQWF GAPADNG
Sequences:
>Translated_807_residues MLFLCPPFTAILTKKACPAASEAIVWNAPRKPEFAARTPAPLCVTLPTHREVFMRLPWLAGCAIIAMLPLLWLPVLPGPC SLAGASALALALIRLHGRAVAGVAMTLLLVVWGVLSAHQALWPTRHLTGAIRQAEVILSETDGQTLHRGQMVRLRGRYLF PPVGVTLYGELAPAPACAGQHWLMTLRLRPVHGQLNDGGFDSQRYALAQHRPLSGGIVAASALDARCSLRARYLTSLTRR LQTYPWRAVMLGLGMGERLSLPTEIKVLMQNTGTSHLMAISGLHIALAASLIMLLLRGVQYILPGRWIGWRLPLVAGLAG AVGYAWLTGMQPPALRTCLGLAVCCALRLSGQRWTAWQVWLCCLGAILVADPLAVLSQSLWLSAFAVAGLIFWFQWLPLP AGRWRWPWKTIIALVHLQAGVTLLLLPLQLLLFHGISLTSMAANLLAVPLVTLLAVPLILTAMLVHLSGPELVESLLWLA ADRVLALLFWGLRRLPDGWLMLDTRWLWISILPWLLVMGWRFQSWRHSPALCLSVLFLLTRPFSRQPPADEWRVTMLDVG QGLAMVIERHGKALLYDTGPAWPQGDSGQQVIIPWLRWHHLQLQGIMLSHEHLDHRGGLDSVLQAWPQAWVRSPLGWAHH LPCHRGERWQWQGLNFQALWPLPGSTAKGNNHSCVVRIDDGRSSILLTGDIERQAEQAMISRYWRHLTSTLIQVPHHGSN TSSSALLVRRVDGAAALASASRYNAWRMPSYKVVQRYRQRGYRWFATPQQGQITVVFSAEGWQIHSLRDQVLPRWYHQWF GAPADNG >Mature_807_residues MLFLCPPFTAILTKKACPAASEAIVWNAPRKPEFAARTPAPLCVTLPTHREVFMRLPWLAGCAIIAMLPLLWLPVLPGPC SLAGASALALALIRLHGRAVAGVAMTLLLVVWGVLSAHQALWPTRHLTGAIRQAEVILSETDGQTLHRGQMVRLRGRYLF PPVGVTLYGELAPAPACAGQHWLMTLRLRPVHGQLNDGGFDSQRYALAQHRPLSGGIVAASALDARCSLRARYLTSLTRR LQTYPWRAVMLGLGMGERLSLPTEIKVLMQNTGTSHLMAISGLHIALAASLIMLLLRGVQYILPGRWIGWRLPLVAGLAG AVGYAWLTGMQPPALRTCLGLAVCCALRLSGQRWTAWQVWLCCLGAILVADPLAVLSQSLWLSAFAVAGLIFWFQWLPLP AGRWRWPWKTIIALVHLQAGVTLLLLPLQLLLFHGISLTSMAANLLAVPLVTLLAVPLILTAMLVHLSGPELVESLLWLA ADRVLALLFWGLRRLPDGWLMLDTRWLWISILPWLLVMGWRFQSWRHSPALCLSVLFLLTRPFSRQPPADEWRVTMLDVG QGLAMVIERHGKALLYDTGPAWPQGDSGQQVIIPWLRWHHLQLQGIMLSHEHLDHRGGLDSVLQAWPQAWVRSPLGWAHH LPCHRGERWQWQGLNFQALWPLPGSTAKGNNHSCVVRIDDGRSSILLTGDIERQAEQAMISRYWRHLTSTLIQVPHHGSN TSSSALLVRRVDGAAALASASRYNAWRMPSYKVVQRYRQRGYRWFATPQQGQITVVFSAEGWQIHSLRDQVLPRWYHQWF GAPADNG
Specific function: Unknown
COG id: COG0658
COG function: function code R; Predicted membrane metal-binding protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis ComEC, N.gonorrhoeae ComA, and H.influenzae Rec2 [H]
Homologues:
Organism=Escherichia coli, GI87081801, Length=756, Percent_Identity=60.8465608465608, Blast_Score=932, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR004477 - InterPro: IPR004797 [H]
Pfam domain/function: PF03772 Competence; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 89904; Mature: 89904
Theoretical pI: Translated: 10.73; Mature: 10.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFLCPPFTAILTKKACPAASEAIVWNAPRKPEFAARTPAPLCVTLPTHREVFMRLPWLA CEEECCCHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCEEEECCCHHHHHHHCCHHH GCAIIAMLPLLWLPVLPGPCSLAGASALALALIRLHGRAVAGVAMTLLLVVWGVLSAHQA HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH LWPTRHLTGAIRQAEVILSETDGQTLHRGQMVRLRGRYLFPPVGVTLYGELAPAPACAGQ HCCHHHHHHHHHHHHHEEECCCCCHHHCCCEEEECCCEECCCCCEEEEECCCCCCCCCCC HWLMTLRLRPVHGQLNDGGFDSQRYALAQHRPLSGGIVAASALDARCSLRARYLTSLTRR CEEEEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHH LQTYPWRAVMLGLGMGERLSLPTEIKVLMQNTGTSHLMAISGLHIALAASLIMLLLRGVQ HHHCCHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH YILPGRWIGWRLPLVAGLAGAVGYAWLTGMQPPALRTCLGLAVCCALRLSGQRWTAWQVW HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH LCCLGAILVADPLAVLSQSLWLSAFAVAGLIFWFQWLPLPAGRWRWPWKTIIALVHLQAG HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHC VTLLLLPLQLLLFHGISLTSMAANLLAVPLVTLLAVPLILTAMLVHLSGPELVESLLWLA HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH ADRVLALLFWGLRRLPDGWLMLDTRWLWISILPWLLVMGWRFQSWRHSPALCLSVLFLLT HHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHC RPFSRQPPADEWRVTMLDVGQGLAMVIERHGKALLYDTGPAWPQGDSGQQVIIPWLRWHH CCCCCCCCCCHHEEEEEECCCCHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEEHHHHEE LQLQGIMLSHEHLDHRGGLDSVLQAWPQAWVRSPLGWAHHLPCHRGERWQWQGLNFQALW EEEEEEEECHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCEEECCCCEEEEC PLPGSTAKGNNHSCVVRIDDGRSSILLTGDIERQAEQAMISRYWRHLTSTLIQVPHHGSN CCCCCCCCCCCCEEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TSSSALLVRRVDGAAALASASRYNAWRMPSYKVVQRYRQRGYRWFATPQQGQITVVFSAE CCCCEEEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEECCCCCCEEEEEEECC GWQIHSLRDQVLPRWYHQWFGAPADNG CCEEHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLFLCPPFTAILTKKACPAASEAIVWNAPRKPEFAARTPAPLCVTLPTHREVFMRLPWLA CEEECCCHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCEEEECCCHHHHHHHCCHHH GCAIIAMLPLLWLPVLPGPCSLAGASALALALIRLHGRAVAGVAMTLLLVVWGVLSAHQA HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH LWPTRHLTGAIRQAEVILSETDGQTLHRGQMVRLRGRYLFPPVGVTLYGELAPAPACAGQ HCCHHHHHHHHHHHHHEEECCCCCHHHCCCEEEECCCEECCCCCEEEEECCCCCCCCCCC HWLMTLRLRPVHGQLNDGGFDSQRYALAQHRPLSGGIVAASALDARCSLRARYLTSLTRR CEEEEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHH LQTYPWRAVMLGLGMGERLSLPTEIKVLMQNTGTSHLMAISGLHIALAASLIMLLLRGVQ HHHCCHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH YILPGRWIGWRLPLVAGLAGAVGYAWLTGMQPPALRTCLGLAVCCALRLSGQRWTAWQVW HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH LCCLGAILVADPLAVLSQSLWLSAFAVAGLIFWFQWLPLPAGRWRWPWKTIIALVHLQAG HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHC VTLLLLPLQLLLFHGISLTSMAANLLAVPLVTLLAVPLILTAMLVHLSGPELVESLLWLA HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH ADRVLALLFWGLRRLPDGWLMLDTRWLWISILPWLLVMGWRFQSWRHSPALCLSVLFLLT HHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHC RPFSRQPPADEWRVTMLDVGQGLAMVIERHGKALLYDTGPAWPQGDSGQQVIIPWLRWHH CCCCCCCCCCHHEEEEEECCCCHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEEHHHHEE LQLQGIMLSHEHLDHRGGLDSVLQAWPQAWVRSPLGWAHHLPCHRGERWQWQGLNFQALW EEEEEEEECHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCEEECCCCEEEEC PLPGSTAKGNNHSCVVRIDDGRSSILLTGDIERQAEQAMISRYWRHLTSTLIQVPHHGSN CCCCCCCCCCCCEEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TSSSALLVRRVDGAAALASASRYNAWRMPSYKVVQRYRQRGYRWFATPQQGQITVVFSAE CCCCEEEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEECCCCCCEEEEEEECC GWQIHSLRDQVLPRWYHQWFGAPADNG CCEEHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 8094880 [H]