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The map label for this gene is ybjT [H]

Identifier: 238893930

GI number: 238893930

Start: 1806403

End: 1807845

Strand: Reverse

Name: ybjT [H]

Synonym: KP1_1867

Alternate gene names: 238893930

Gene position: 1807845-1806403 (Counterclockwise)

Preceding gene: 238893931

Following gene: 238893929

Centisome position: 34.44

GC content: 60.91

Gene sequence:

>1443_bases
GTGTCGCAATCAGTTCTGGTGCTCGGCGCCAGCGGTTATATTGGCCAGCATTTGGTGCGCGCATTAAGCGCGCGGGGCTA
TCCGGTGCTGGCGGCGGCACGCCATATCGACCGATTGCAAAAACTCGCGTTGCCCGGCGTTACCTGCCGGTCAGTCGATC
TCAATCAGCCGCAGGACCTGCCTGCGCTACTCACCGGTATCGATACCCTTTATTATCTGGTCCACGGCATGGGCGAAGGC
GGTGATTTTATCGCCCATGAGCGGCGGGTGGCGACGTATGTGCGCGATGCCCTGCGTCAGTCATCAGTGCGCCAGGTGAT
ATTTCTCAGTTCGCTGCAGGCCCCGGCGCAGGAGCAGTCCGACCATCTGCGCGCTCGTCAGATTACCGGCGATCTCCTGC
GTGAGTCGGGCGTGCCGGTGACCGAGCTGCGGGCCGGGATTATCGTCGGCGCCGGCTCCGCCGCCTTCGAGGTGATGCGC
GACATGGTTTATAACCTGCCGGTGCTAACCCCTCCGCGCTGGGTACGTTCGCGTACTACCCCTGTCGCGCTGGAAAACCT
GCTCGTTGACCTGGTTGAGCTGCTGAATCATCCCTCCGATGCGCACCGCGTCTTCGAAGCCGCCGGTCCGGAGGTGTTAA
GCTATCAGCAGCAGTTCATTCGCTTTATGGCCGTCAGCGGTAAACATCGCCCGCTCATTCCCATTCCCCTGCCGACGCGC
TGGATCTCGGTGTGGTTCCTCAATGTCATCACCTCGGTGCCGCCGACCATCGCCAAGGCGCTGATTCAGGGGCTGAAGCA
CGATCTAATCGCTGACGATCGGGCGCTGCGGGCGCTGATCCCGCAAACGCTGATCCCCTTCGATCAGGCGGTTCGCCGCA
CGCTGAAAGAAGAAGAGCAGTTAGTAAACTCCAGCGACTGGGGCTACGACGCTCAGGCTTTCGCCCGCTGGCGACCGGAG
TACGGCTACTATCCGAAGCAGGCAGGTTGCACCGTCGCCACTCAGGCAAGCCGCCAGGCCCTGTGGCAGGTCGTTAACCA
AATCGGCGGTGAAGAGGGGTATTTTTTCGGCAATCTGCTGTGGAAAACCCGCGGCGCGATGGATCTGCTGGTCGGCCACC
GGCTGGCCAAAGGGCGGCCGCAGCGCGCTTATCTGCAAACCGGCGATACGGTCGACAGCTGGAAGGTAATTATCGTGGAG
GAAGAAAAACAGCTCACCCTGCTATTCGGTATGAAAGCGCCCGGGCTGGGCCGATTAAGCTTTACCATTAACGATAAAGG
CGATCGTCGTGAACTGGACGTGCGCGCCTGGTGGCACCCGCACGGTATGCCAGGCCTGATCTACTGGCTGCTGATGATCC
CGGCGCACCTGTTTATTTTCCGCGGTATGGCGCAACGCATCGCCCGGCTGGCCGAACAAATCTCAGGCAGAGTCGAAGGA
TAA

Upstream 100 bases:

>100_bases
CCTGTTGTCCGTCTGGTCACTCACCTGGATGTCAACCGTCAGCAGCTGAGCGAGGTGGTCGCCCACTGGCAGGCTTTTTT
ACAACGCTAAGGAGTCAGGC

Downstream 100 bases:

>100_bases
GCGTTATTCTTTCATGATTCTCATTGCATAGTCGGGAGAATCACGGAAAAATGCGCACGAAATTCTTTTCTGGGACAGTA
GAGTGATATGAAGGTACTGG

Product: putative nucleoside-diphosphate-sugar epimerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 480; Mature: 479

Protein sequence:

>480_residues
MSQSVLVLGASGYIGQHLVRALSARGYPVLAAARHIDRLQKLALPGVTCRSVDLNQPQDLPALLTGIDTLYYLVHGMGEG
GDFIAHERRVATYVRDALRQSSVRQVIFLSSLQAPAQEQSDHLRARQITGDLLRESGVPVTELRAGIIVGAGSAAFEVMR
DMVYNLPVLTPPRWVRSRTTPVALENLLVDLVELLNHPSDAHRVFEAAGPEVLSYQQQFIRFMAVSGKHRPLIPIPLPTR
WISVWFLNVITSVPPTIAKALIQGLKHDLIADDRALRALIPQTLIPFDQAVRRTLKEEEQLVNSSDWGYDAQAFARWRPE
YGYYPKQAGCTVATQASRQALWQVVNQIGGEEGYFFGNLLWKTRGAMDLLVGHRLAKGRPQRAYLQTGDTVDSWKVIIVE
EEKQLTLLFGMKAPGLGRLSFTINDKGDRRELDVRAWWHPHGMPGLIYWLLMIPAHLFIFRGMAQRIARLAEQISGRVEG

Sequences:

>Translated_480_residues
MSQSVLVLGASGYIGQHLVRALSARGYPVLAAARHIDRLQKLALPGVTCRSVDLNQPQDLPALLTGIDTLYYLVHGMGEG
GDFIAHERRVATYVRDALRQSSVRQVIFLSSLQAPAQEQSDHLRARQITGDLLRESGVPVTELRAGIIVGAGSAAFEVMR
DMVYNLPVLTPPRWVRSRTTPVALENLLVDLVELLNHPSDAHRVFEAAGPEVLSYQQQFIRFMAVSGKHRPLIPIPLPTR
WISVWFLNVITSVPPTIAKALIQGLKHDLIADDRALRALIPQTLIPFDQAVRRTLKEEEQLVNSSDWGYDAQAFARWRPE
YGYYPKQAGCTVATQASRQALWQVVNQIGGEEGYFFGNLLWKTRGAMDLLVGHRLAKGRPQRAYLQTGDTVDSWKVIIVE
EEKQLTLLFGMKAPGLGRLSFTINDKGDRRELDVRAWWHPHGMPGLIYWLLMIPAHLFIFRGMAQRIARLAEQISGRVEG
>Mature_479_residues
SQSVLVLGASGYIGQHLVRALSARGYPVLAAARHIDRLQKLALPGVTCRSVDLNQPQDLPALLTGIDTLYYLVHGMGEGG
DFIAHERRVATYVRDALRQSSVRQVIFLSSLQAPAQEQSDHLRARQITGDLLRESGVPVTELRAGIIVGAGSAAFEVMRD
MVYNLPVLTPPRWVRSRTTPVALENLLVDLVELLNHPSDAHRVFEAAGPEVLSYQQQFIRFMAVSGKHRPLIPIPLPTRW
ISVWFLNVITSVPPTIAKALIQGLKHDLIADDRALRALIPQTLIPFDQAVRRTLKEEEQLVNSSDWGYDAQAFARWRPEY
GYYPKQAGCTVATQASRQALWQVVNQIGGEEGYFFGNLLWKTRGAMDLLVGHRLAKGRPQRAYLQTGDTVDSWKVIIVEE
EKQLTLLFGMKAPGLGRLSFTINDKGDRRELDVRAWWHPHGMPGLIYWLLMIPAHLFIFRGMAQRIARLAEQISGRVEG

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081793, Length=473, Percent_Identity=79.492600422833, Blast_Score=772, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021295
- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF11066 DUF2867; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 53733; Mature: 53602

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQSVLVLGASGYIGQHLVRALSARGYPVLAAARHIDRLQKLALPGVTCRSVDLNQPQDL
CCCCEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCH
PALLTGIDTLYYLVHGMGEGGDFIAHERRVATYVRDALRQSSVRQVIFLSSLQAPAQEQS
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
DHLRARQITGDLLRESGVPVTELRAGIIVGAGSAAFEVMRDMVYNLPVLTPPRWVRSRTT
HHHHHHHHHHHHHHHCCCCHHHHCCCEEEECCHHHHHHHHHHHHCCCCCCCCHHHHCCCC
PVALENLLVDLVELLNHPSDAHRVFEAAGPEVLSYQQQFIRFMAVSGKHRPLIPIPLPTR
HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCHH
WISVWFLNVITSVPPTIAKALIQGLKHDLIADDRALRALIPQTLIPFDQAVRRTLKEEEQ
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LVNSSDWGYDAQAFARWRPEYGYYPKQAGCTVATQASRQALWQVVNQIGGEEGYFFGNLL
HHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEHHHH
WKTRGAMDLLVGHRLAKGRPQRAYLQTGDTVDSWKVIIVEEEKQLTLLFGMKAPGLGRLS
HHHCCHHHHHHHHHHHCCCCCCHHCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCEEE
FTINDKGDRRELDVRAWWHPHGMPGLIYWLLMIPAHLFIFRGMAQRIARLAEQISGRVEG
EEECCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SQSVLVLGASGYIGQHLVRALSARGYPVLAAARHIDRLQKLALPGVTCRSVDLNQPQDL
CCCEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCH
PALLTGIDTLYYLVHGMGEGGDFIAHERRVATYVRDALRQSSVRQVIFLSSLQAPAQEQS
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
DHLRARQITGDLLRESGVPVTELRAGIIVGAGSAAFEVMRDMVYNLPVLTPPRWVRSRTT
HHHHHHHHHHHHHHHCCCCHHHHCCCEEEECCHHHHHHHHHHHHCCCCCCCCHHHHCCCC
PVALENLLVDLVELLNHPSDAHRVFEAAGPEVLSYQQQFIRFMAVSGKHRPLIPIPLPTR
HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCHH
WISVWFLNVITSVPPTIAKALIQGLKHDLIADDRALRALIPQTLIPFDQAVRRTLKEEEQ
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LVNSSDWGYDAQAFARWRPEYGYYPKQAGCTVATQASRQALWQVVNQIGGEEGYFFGNLL
HHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEHHHH
WKTRGAMDLLVGHRLAKGRPQRAYLQTGDTVDSWKVIIVEEEKQLTLLFGMKAPGLGRLS
HHHCCHHHHHHHHHHHCCCCCCHHCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCEEE
FTINDKGDRRELDVRAWWHPHGMPGLIYWLLMIPAHLFIFRGMAQRIARLAEQISGRVEG
EEECCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]