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The map label for this gene is ybjS [H]

Identifier: 238893929

GI number: 238893929

Start: 1805302

End: 1806315

Strand: Reverse

Name: ybjS [H]

Synonym: KP1_1866

Alternate gene names: 238893929

Gene position: 1806315-1805302 (Counterclockwise)

Preceding gene: 238893930

Following gene: 238893926

Centisome position: 34.42

GC content: 58.58

Gene sequence:

>1014_bases
ATGAAGGTACTGGTTACCGGTGCGACCAGCGGATTAGGCCGCAACGCAGTGGAATATCTGCGCAACAAGGGCATCAGCGT
GCGAGCGACCGGGCGCAACGAAGCGATGGGCAAGCTTCTGAGCAAAATGGGGGCGGAATTCATCCCGGCAGATTTAACCG
AGCTGGTCTCTTCGCAGGCTAAAGTGATGCTCGCCGGTATCGATACCCTATGGCACTGCTCCAGCTTTACCTCGCCATGG
GGCACTCAGCAGGCTTTCGATCTCGCTAACGTCCGCGCCACCCGTCGTCTGGGCGAATGGTCAGTGGCATGGGGAGTGCG
CAATTTCGTCCATATCTCTTCGCCATCGCTCTATTTTGATTATCACCATCATCGTGATATCCAGGAAGATTTCCGTCCAC
ACCGCTTCGCCAACGAGTTTGCCCGCAGCAAGGCGGCCAGCGAGGAGGTGATCAACCTGCTGGCGCAGGCTAACCCGCAT
ACCCGTTTTACCATTCTGCGGCCGCAGAGCCTGTTTGGGCCGCACGACAAAGTCTTTATCCCCCGGCTGGCGCAAATGAT
GCAGCATTATGGCAGCGTCCTGCTCCCGCGCGGCGGCAGCGCGCTGGTCGACATGACCTATTATGAAAACGCCGTACATG
CGATGTGGCTGGCGAGCCAGCCGGCCTGCGATCATCTTCCCTCCGCCCGCGCGTGGAATATCAGCAACGGCGAACCGCGC
ACCTTGCGGAGCATCGTGCAGAAATTGATCGACGAGCTCGGTATCAAATGCCGGATCCGCTCAGTTCCCTATCCGATGCT
GGATATTATCGCCCGCAGCATGGAGCGCTTTGGCGATAAAACCGCCAAAGAACCCGCGTTTACCCACTACGGCGTCTCCA
AGCTTAACTTTGATTTTACGCTCGATATCACCCGCGCGCAGGACGAGCTGGGCTATCAGCCGGTGGTGACGCTTGACGAC
GGCATCGTGCGCACCGCCGCCTGGCTTCGCGACCACGGTAAACTACACCGCTAA

Upstream 100 bases:

>100_bases
AGTCGAAGGATAAGCGTTATTCTTTCATGATTCTCATTGCATAGTCGGGAGAATCACGGAAAAATGCGCACGAAATTCTT
TTCTGGGACAGTAGAGTGAT

Downstream 100 bases:

>100_bases
CCCTGGCCATATTTTTCTAACAGCGCCTCGGCTATCGCTTCGGTTTGCGCATCCGCTACCCCATCCCAGCGCTGCGGACG
AAAGTGCATCTGGAAGGCGA

Product: putative oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MKVLVTGATSGLGRNAVEYLRNKGISVRATGRNEAMGKLLSKMGAEFIPADLTELVSSQAKVMLAGIDTLWHCSSFTSPW
GTQQAFDLANVRATRRLGEWSVAWGVRNFVHISSPSLYFDYHHHRDIQEDFRPHRFANEFARSKAASEEVINLLAQANPH
TRFTILRPQSLFGPHDKVFIPRLAQMMQHYGSVLLPRGGSALVDMTYYENAVHAMWLASQPACDHLPSARAWNISNGEPR
TLRSIVQKLIDELGIKCRIRSVPYPMLDIIARSMERFGDKTAKEPAFTHYGVSKLNFDFTLDITRAQDELGYQPVVTLDD
GIVRTAAWLRDHGKLHR

Sequences:

>Translated_337_residues
MKVLVTGATSGLGRNAVEYLRNKGISVRATGRNEAMGKLLSKMGAEFIPADLTELVSSQAKVMLAGIDTLWHCSSFTSPW
GTQQAFDLANVRATRRLGEWSVAWGVRNFVHISSPSLYFDYHHHRDIQEDFRPHRFANEFARSKAASEEVINLLAQANPH
TRFTILRPQSLFGPHDKVFIPRLAQMMQHYGSVLLPRGGSALVDMTYYENAVHAMWLASQPACDHLPSARAWNISNGEPR
TLRSIVQKLIDELGIKCRIRSVPYPMLDIIARSMERFGDKTAKEPAFTHYGVSKLNFDFTLDITRAQDELGYQPVVTLDD
GIVRTAAWLRDHGKLHR
>Mature_337_residues
MKVLVTGATSGLGRNAVEYLRNKGISVRATGRNEAMGKLLSKMGAEFIPADLTELVSSQAKVMLAGIDTLWHCSSFTSPW
GTQQAFDLANVRATRRLGEWSVAWGVRNFVHISSPSLYFDYHHHRDIQEDFRPHRFANEFARSKAASEEVINLLAQANPH
TRFTILRPQSLFGPHDKVFIPRLAQMMQHYGSVLLPRGGSALVDMTYYENAVHAMWLASQPACDHLPSARAWNISNGEPR
TLRSIVQKLIDELGIKCRIRSVPYPMLDIIARSMERFGDKTAKEPAFTHYGVSKLNFDFTLDITRAQDELGYQPVVTLDD
GIVRTAAWLRDHGKLHR

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI193211614, Length=338, Percent_Identity=24.5562130177515, Blast_Score=95, Evalue=8e-20,
Organism=Homo sapiens, GI8393516, Length=338, Percent_Identity=24.5562130177515, Blast_Score=95, Evalue=8e-20,
Organism=Homo sapiens, GI239745448, Length=334, Percent_Identity=24.251497005988, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI310132178, Length=334, Percent_Identity=24.251497005988, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI310113012, Length=334, Percent_Identity=24.251497005988, Blast_Score=69, Evalue=6e-12,
Organism=Escherichia coli, GI87081792, Length=337, Percent_Identity=89.3175074183976, Blast_Score=636, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6321437, Length=296, Percent_Identity=25, Blast_Score=78, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 37958; Mature: 37958

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLVTGATSGLGRNAVEYLRNKGISVRATGRNEAMGKLLSKMGAEFIPADLTELVSSQA
CEEEEECCCCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH
KVMLAGIDTLWHCSSFTSPWGTQQAFDLANVRATRRLGEWSVAWGVRNFVHISSPSLYFD
EEEEECHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHEEEECCCEEEEE
YHHHRDIQEDFRPHRFANEFARSKAASEEVINLLAQANPHTRFTILRPQSLFGPHDKVFI
CHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHCCCCCCCHH
PRLAQMMQHYGSVLLPRGGSALVDMTYYENAVHAMWLASQPACDHLPSARAWNISNGEPR
HHHHHHHHHCCCEEECCCCCEEEEEHHHHHHHHHHHCCCCCCHHCCCCCCEECCCCCCCH
TLRSIVQKLIDELGIKCRIRSVPYPMLDIIARSMERFGDKTAKEPAFTHYGVSKLNFDFT
HHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHCCEEEE
LDITRAQDELGYQPVVTLDDGIVRTAAWLRDHGKLHR
EEEECCHHHCCCCCEEEECCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKVLVTGATSGLGRNAVEYLRNKGISVRATGRNEAMGKLLSKMGAEFIPADLTELVSSQA
CEEEEECCCCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH
KVMLAGIDTLWHCSSFTSPWGTQQAFDLANVRATRRLGEWSVAWGVRNFVHISSPSLYFD
EEEEECHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHEEEECCCEEEEE
YHHHRDIQEDFRPHRFANEFARSKAASEEVINLLAQANPHTRFTILRPQSLFGPHDKVFI
CHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHCCCCCCCHH
PRLAQMMQHYGSVLLPRGGSALVDMTYYENAVHAMWLASQPACDHLPSARAWNISNGEPR
HHHHHHHHHCCCEEECCCCCEEEEEHHHHHHHHHHHCCCCCCHHCCCCCCEECCCCCCCH
TLRSIVQKLIDELGIKCRIRSVPYPMLDIIARSMERFGDKTAKEPAFTHYGVSKLNFDFT
HHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHCCEEEE
LDITRAQDELGYQPVVTLDDGIVRTAAWLRDHGKLHR
EEEECCHHHCCCCCEEEECCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]