Click here to switch to the map view.

The map label for this gene is rimK [H]

Identifier: 238893911

GI number: 238893911

Start: 1787797

End: 1788699

Strand: Direct

Name: rimK [H]

Synonym: KP1_1846

Alternate gene names: 238893911

Gene position: 1787797-1788699 (Clockwise)

Preceding gene: 238893910

Following gene: 238893912

Centisome position: 34.06

GC content: 63.01

Gene sequence:

>903_bases
ATGAAAATTGCCATATTATCCCGGGATGGAACGCTTTATTCATGTCGGCGCCTGCGCGAAGCAGCGCAACAGCGCGGTCA
TCAGATCGAGATCCTCGATCCGCTTTCCTGTTATATGAACGTCAGCCCGGTGGCCTCGTCGATCCACTACAAAGGGCGTC
AGCTGCCGCACTTTGATGCGGTGATCCCGCGCATTGGCTCGGCGATCACCTACTATGGCACCGCGGCCCTGCGCCAGTTT
GAGCTCCTGGGAAGCTATCCGCTGAATGAGTCGGTCGCCATCACCCGCGCTCGCGATAAGCTGCGCTCGCTGCAGCTGCT
GGCGCGCCAGGGCATCGATCTGCCATTGACCGGCATCGCTCACTCTCCGGATGACACCAGCGATCTGATCGCCATGGTGG
GCGGCGCGCCGCTGGTGGTGAAGCTGGTGGAGGGCACCCAGGGGATCGGCGTGGTGCTGGCGGAGACCCGCCAGGCGGCG
GAGAGCGTGATCGACGCCTTTCGCGGACTGAACGCTCATATTCTGGTGCAGGAATACATTGCCGAAGCGAAAGGGTGCGA
TATCCGCTGCCTGGTGGTCGGCAATGAGGTGGTGGCGGCGATCGAGCGGCGGGCGAAAGAGGGGGATTTCCGCTCTAACC
TGCACCGCGGCGGCATGGCCACGGTGGCGCAGATTAGCGACGAGGAGCGGGCCATTGCCATCAAGGCAACGCAAACTCTC
GGGCTGGACGCCGCCGGTGTCGATATTTTACGCGCCGCCCGCGGGCCGCTGGTGATGGAGGTGAATGCCTCGCCGGGGCT
GGAAGGGGTGGAAACCACCACCGGCGTGGATGTCGCCGGCAAGATGATCGCCTGGATCGAGCGCCAGGCGACGCCGGAAT
TCTGTTTGAAAATAGGCGGCTAA

Upstream 100 bases:

>100_bases
CTGCTCCGGCCAGGTGATATCCGCCGCCGGCCGCAGGAAAGGTGAAAGTGTGTTCGATAGCTGAGGCCCGCCAGAGCGGG
TCTTTTCGCAGAGGTGCAGG

Downstream 100 bases:

>100_bases
CCGCCGGATGCAAGACGGCCATGGTATGCGGCGCTTTTTTTGCGTAAGCTATGGCGTCGTTTTTCCACTGTAAGAGGTCA
CAGGCACTATGGATTCACTG

Product: ribosomal protein S6 modification protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MKIAILSRDGTLYSCRRLREAAQQRGHQIEILDPLSCYMNVSPVASSIHYKGRQLPHFDAVIPRIGSAITYYGTAALRQF
ELLGSYPLNESVAITRARDKLRSLQLLARQGIDLPLTGIAHSPDDTSDLIAMVGGAPLVVKLVEGTQGIGVVLAETRQAA
ESVIDAFRGLNAHILVQEYIAEAKGCDIRCLVVGNEVVAAIERRAKEGDFRSNLHRGGMATVAQISDEERAIAIKATQTL
GLDAAGVDILRAARGPLVMEVNASPGLEGVETTTGVDVAGKMIAWIERQATPEFCLKIGG

Sequences:

>Translated_300_residues
MKIAILSRDGTLYSCRRLREAAQQRGHQIEILDPLSCYMNVSPVASSIHYKGRQLPHFDAVIPRIGSAITYYGTAALRQF
ELLGSYPLNESVAITRARDKLRSLQLLARQGIDLPLTGIAHSPDDTSDLIAMVGGAPLVVKLVEGTQGIGVVLAETRQAA
ESVIDAFRGLNAHILVQEYIAEAKGCDIRCLVVGNEVVAAIERRAKEGDFRSNLHRGGMATVAQISDEERAIAIKATQTL
GLDAAGVDILRAARGPLVMEVNASPGLEGVETTTGVDVAGKMIAWIERQATPEFCLKIGG
>Mature_300_residues
MKIAILSRDGTLYSCRRLREAAQQRGHQIEILDPLSCYMNVSPVASSIHYKGRQLPHFDAVIPRIGSAITYYGTAALRQF
ELLGSYPLNESVAITRARDKLRSLQLLARQGIDLPLTGIAHSPDDTSDLIAMVGGAPLVVKLVEGTQGIGVVLAETRQAA
ESVIDAFRGLNAHILVQEYIAEAKGCDIRCLVVGNEVVAAIERRAKEGDFRSNLHRGGMATVAQISDEERAIAIKATQTL
GLDAAGVDILRAARGPLVMEVNASPGLEGVETTTGVDVAGKMIAWIERQATPEFCLKIGG

Specific function: Responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6 [H]

COG id: COG0189

COG function: function code HJ; Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-grasp domain [H]

Homologues:

Organism=Homo sapiens, GI164663810, Length=207, Percent_Identity=30.9178743961353, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI134254462, Length=207, Percent_Identity=31.8840579710145, Blast_Score=82, Evalue=4e-16,
Organism=Escherichia coli, GI1787076, Length=300, Percent_Identity=86.6666666666667, Blast_Score=540, Evalue=1e-155,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011761
- InterPro:   IPR013651
- InterPro:   IPR013815
- InterPro:   IPR013816
- InterPro:   IPR004666 [H]

Pfam domain/function: PF08443 RimK [H]

EC number: NA

Molecular weight: Translated: 32194; Mature: 32194

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: PS50975 ATP_GRASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAILSRDGTLYSCRRLREAAQQRGHQIEILDPLSCYMNVSPVASSIHYKGRQLPHFDA
CEEEEEECCCCHHHHHHHHHHHHHCCCEEEEECHHHHHEECCHHHHHHHCCCCCCCHHHH
VIPRIGSAITYYGTAALRQFELLGSYPLNESVAITRARDKLRSLQLLARQGIDLPLTGIA
HHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCC
HSPDDTSDLIAMVGGAPLVVKLVEGTQGIGVVLAETRQAAESVIDAFRGLNAHILVQEYI
CCCCCHHHHHHHHCCCCEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHCCCCEEHHHHHH
AEAKGCDIRCLVVGNEVVAAIERRAKEGDFRSNLHRGGMATVAQISDEERAIAIKATQTL
HHHCCCCEEEEEECCHHHHHHHHHHCCCCHHHHHCCCCCEEEEECCCCCCEEEEEEEHCC
GLDAAGVDILRAARGPLVMEVNASPGLEGVETTTGVDVAGKMIAWIERQATPEFCLKIGG
CCCCCCHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHEECCC
>Mature Secondary Structure
MKIAILSRDGTLYSCRRLREAAQQRGHQIEILDPLSCYMNVSPVASSIHYKGRQLPHFDA
CEEEEEECCCCHHHHHHHHHHHHHCCCEEEEECHHHHHEECCHHHHHHHCCCCCCCHHHH
VIPRIGSAITYYGTAALRQFELLGSYPLNESVAITRARDKLRSLQLLARQGIDLPLTGIA
HHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCC
HSPDDTSDLIAMVGGAPLVVKLVEGTQGIGVVLAETRQAAESVIDAFRGLNAHILVQEYI
CCCCCHHHHHHHHCCCCEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHCCCCEEHHHHHH
AEAKGCDIRCLVVGNEVVAAIERRAKEGDFRSNLHRGGMATVAQISDEERAIAIKATQTL
HHHCCCCEEEEEECCHHHHHHHHHHCCCCHHHHHCCCCCEEEEECCCCCCEEEEEEEHCC
GLDAAGVDILRAARGPLVMEVNASPGLEGVETTTGVDVAGKMIAWIERQATPEFCLKIGG
CCCCCCHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Glu; Ribosomal protein S6 [C]

Specific reaction: Catalyzes the addition of glutamic acids to the carboxyl end of ribosomal protein S6 [C]

General reaction: Ligases; Forming Carbon-Nitrogen Bonds; Acid-D-Amino-Acid Ligases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA