Click here to switch to the map view.

The map label for this gene is ybjC [H]

Identifier: 238893909

GI number: 238893909

Start: 1786689

End: 1786976

Strand: Direct

Name: ybjC [H]

Synonym: KP1_1844

Alternate gene names: 238893909

Gene position: 1786689-1786976 (Clockwise)

Preceding gene: 238893907

Following gene: 238893910

Centisome position: 34.04

GC content: 58.33

Gene sequence:

>288_bases
ATGCGAAAATTTGCCCCATTGCCGAAAAGCATACTGCTGGTTGAGATCCTCGGGATGGGGCTGTTAACCCTCGCCTGGCT
CTCCCTTAACCAGTATGTCCAGCTGCCTGCGCCCATTGCCAGCCCGACCGCGGCGCTGGTGATGCTCTTTGCCGGGATCG
TGCTGATGATCCCCGCCGCCCTCGTCGTGATGTGGCGGATGGCGCAGATCGTGGCCCCGCAGTTAACGCACTCTCCAAAG
CCTGAATCCTTGTCTGACAGAGAAAAACGTAATGACGCCGACCATTGA

Upstream 100 bases:

>100_bases
GGCTATGTTTGATAAATGTCGGACTGTCAAAACCCGTATACTGGCCCGACGGCGCGGTGGAATTGGCTGGCGCGCCGCGT
TTATCAACCGGAGAGGCGTG

Downstream 100 bases:

>100_bases
GCTGCTGCGCAGCCACCGTTCCATCCGCCACTTCACCGATGCCCCCGTGAGCGACGAACAGCGCGCAGAGATTATCGCCA
GCGCGCAAGCGGCATCTACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MRKFAPLPKSILLVEILGMGLLTLAWLSLNQYVQLPAPIASPTAALVMLFAGIVLMIPAALVVMWRMAQIVAPQLTHSPK
PESLSDREKRNDADH

Sequences:

>Translated_95_residues
MRKFAPLPKSILLVEILGMGLLTLAWLSLNQYVQLPAPIASPTAALVMLFAGIVLMIPAALVVMWRMAQIVAPQLTHSPK
PESLSDREKRNDADH
>Mature_95_residues
MRKFAPLPKSILLVEILGMGLLTLAWLSLNQYVQLPAPIASPTAALVMLFAGIVLMIPAALVVMWRMAQIVAPQLTHSPK
PESLSDREKRNDADH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787074, Length=95, Percent_Identity=45.2631578947368, Blast_Score=81, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010815 [H]

Pfam domain/function: PF07214 DUF1418 [H]

EC number: NA

Molecular weight: Translated: 10428; Mature: 10428

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKFAPLPKSILLVEILGMGLLTLAWLSLNQYVQLPAPIASPTAALVMLFAGIVLMIPAA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
LVVMWRMAQIVAPQLTHSPKPESLSDREKRNDADH
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCC
>Mature Secondary Structure
MRKFAPLPKSILLVEILGMGLLTLAWLSLNQYVQLPAPIASPTAALVMLFAGIVLMIPAA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
LVVMWRMAQIVAPQLTHSPKPESLSDREKRNDADH
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 3530878; 7567469 [H]