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The map label for this gene is ybiO [H]

Identifier: 238893862

GI number: 238893862

Start: 1731610

End: 1733805

Strand: Reverse

Name: ybiO [H]

Synonym: KP1_1794

Alternate gene names: 238893862

Gene position: 1733805-1731610 (Counterclockwise)

Preceding gene: 238893863

Following gene: 238893860

Centisome position: 33.03

GC content: 59.79

Gene sequence:

>2196_bases
ATGCCGTGGATCCTGCTTTTGCTCGCTGCACTGTTTACTGCCCCGCTTTCCGCCGCCACCCTCCCCGGCGTGCCGACGGC
TAACACTGATAAAAACAGCGCCAGCGAACCCGATGTGGAACAGAAAAGAGCGGCTTATGCCGCACTGGCCGATGTGCTGG
CCAACGACTCCGCCCGTCAGGAGCTCATTGACCAGCTGCGTAAAGCAGCCGCCACGCCGCCGCCCGACAGCACCCCGACG
CTGACGCCACCGGCGGTGAAAGAAGAGACCACGGTACTGGAGAACGTCACCCAGATAAGCCGGGAATATGGCGAACAGCT
CTCATCACGCTTTTCCCAGCTGTGGCGCAATATCACCGGCTCACCGCATAAGCCCTTTAATCCGCAAACCTTTACCAGCG
CGGCCTGGCATTTTTTACTGCTGGCCGGGCTGGTGTTTGCCTTCTGGTGGCTGGTACGCCTCGCGGCGCTGCCGCTGTAT
CGCAAAATGGGCGAATGGGGACGGCATAAAAACCGCGATCGCGGTAACTGGCTTCAGCTGCCCCTGACCATCGCCGGGGC
GTTTATCATCGACCTGCTGCTGCTGGCGCTAACCCTGTTTGTCGGTCAGCTGCTAAGCGATCGCCTGAATGGGAATAACC
CTACCATCGCCTTCCAGCAGAGCCTTTTCCTCAACGCCTTCGCGCTGATCGAGTTTTTTAAAGCTATTCTGCGGCTCATT
TTCTGCCCGCGCATTCCTGCCCTGCGGCCCTTTAACCTCAGCGACGAGGCCGCGTCATACTGGAGCCTGCGCCTGAGCGC
GCTCAGCAGCCTGATTGGTTACGGTCTGATCGTCGCGGTGCCGATTATTTCCAATCAGGTGAATGTTCAGGTTGGCGCGC
TGGCTAACGTCGTCATCATGCTGTGCATTACGCTGTGGGCGCTGTACCTGATTTTTCATAACAAAGCGGTGATTACTCAA
GGGTTGATCCACCTGGCCGACCACTCACTCGCTTTCTTTAGCCTGTTTATCCGCGCCTTCGCGCTGGTCTGGCACTGGCT
GGCCTGCGCCTACTTTGTGGTGCTTTTTTTCTTTTCCCTGTTCGACCCGGGCAACAGCCTGAAATTCATGATGGGCGCCA
CCCTGCAAAGCCTGGCGATTATCGGCGGCGCGGCGCTGGTGTCTGGCATCCTGTCGCGCTGGATAGCCAAAACCATCACC
CTGTCGCCCGCCACTCAGCGCAACTACCCTGAACTGCAAAAGCGTCTAAATGGCTGGATCTCCGCCTCGCTGAAGGCGGC
GCGCATTCTCACCGTCTGTGTCGCCATCATGCTGCTGTTGAGCGCCTGGGGCCTGTTTGACTTCCGGGAATGGCTGCACA
ACGATGCCGGGCAAAAAACGGTGGATGTGCTGATCCGCATCGCCCTGATCCTCTTCTTCTCCGCCATTGGCTGGACGGTT
CTGGCCAGCCTGATTGAAAACCGGCTGGCATCGGATATTCATGGCCGTCCGCTGCCCAGCGCGCGGGCCCGGACGCTGCT
GACGCTGTTTCGCAACGCGCTGGCGGTGGTGATCAGCACCATCACGGTGATGATCCTGCTCTCGGAAATTGGGGTAAACA
TTGCGCCGCTGCTGGCGGGCGCCGGGGCGTTAGGGCTGGCCATTTCGTTTGGTGCGCAAACCCTGGTCAAAGACATTATC
ACTGGCATATTTATCCAGTTTGAGAACGGGATGAACACCGGCGACCTGGTCACCATCGGCCCTTTGACCGGCACCGTGGA
ACGAATGTCGATTCGCTCCGTGGGGGTACGTCAGGATACCGGCGCCTATCACATTATTCCCTGGTCCTCGATCACCACCT
TTGCCAACTTCGTGCGCGGCATTGGCTCGGTTGTGGCTAACTATGACGTTGACCGCCATGAGGATCTGGATAAAGCCAGC
CAGGCGCTGAAGGCGGCGGTGGACGATCTGCTGGCCCAGGAGGAGATCCGCGGTCTGATCATTGGCGAACCGTCGTTCGC
CGGGCTGGTGGGGCTGAGCAATACCGCCTTTACGCTACGCGTTAGCTTCACCACCCTGCCGCTGAAGCAGTGGACGGTGC
GTTTTGCCCTCGACACTCAGGTGAAAAAGCACTTCGACCGCGCCGGGGTTCGCGCGCCGGTACAGACCTGGCAGCAGCTG
CCGATGCCGGGCGCCGACAGCCCGGCCGCCGAGTAG

Upstream 100 bases:

>100_bases
TCTCTCCCCCACGATGAGAGCCGCTTTTCCAGAATCCTCTTCCCTCCCCTTCCGCCAGCGGCTTCTATACTTACCCGTTT
ACGTTGCAACGGAGGTGCCC

Downstream 100 bases:

>100_bases
CGTTAGAATGGACGACGGCGTTTGGCGTCGTCCATAAAGCTCCAGGCGATAAAGCGACTTTGCTTTTGCCCCTGGGCCAT
CTCCTTTTTCACCACTTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 731; Mature: 730

Protein sequence:

>731_residues
MPWILLLLAALFTAPLSAATLPGVPTANTDKNSASEPDVEQKRAAYAALADVLANDSARQELIDQLRKAAATPPPDSTPT
LTPPAVKEETTVLENVTQISREYGEQLSSRFSQLWRNITGSPHKPFNPQTFTSAAWHFLLLAGLVFAFWWLVRLAALPLY
RKMGEWGRHKNRDRGNWLQLPLTIAGAFIIDLLLLALTLFVGQLLSDRLNGNNPTIAFQQSLFLNAFALIEFFKAILRLI
FCPRIPALRPFNLSDEAASYWSLRLSALSSLIGYGLIVAVPIISNQVNVQVGALANVVIMLCITLWALYLIFHNKAVITQ
GLIHLADHSLAFFSLFIRAFALVWHWLACAYFVVLFFFSLFDPGNSLKFMMGATLQSLAIIGGAALVSGILSRWIAKTIT
LSPATQRNYPELQKRLNGWISASLKAARILTVCVAIMLLLSAWGLFDFREWLHNDAGQKTVDVLIRIALILFFSAIGWTV
LASLIENRLASDIHGRPLPSARARTLLTLFRNALAVVISTITVMILLSEIGVNIAPLLAGAGALGLAISFGAQTLVKDII
TGIFIQFENGMNTGDLVTIGPLTGTVERMSIRSVGVRQDTGAYHIIPWSSITTFANFVRGIGSVVANYDVDRHEDLDKAS
QALKAAVDDLLAQEEIRGLIIGEPSFAGLVGLSNTAFTLRVSFTTLPLKQWTVRFALDTQVKKHFDRAGVRAPVQTWQQL
PMPGADSPAAE

Sequences:

>Translated_731_residues
MPWILLLLAALFTAPLSAATLPGVPTANTDKNSASEPDVEQKRAAYAALADVLANDSARQELIDQLRKAAATPPPDSTPT
LTPPAVKEETTVLENVTQISREYGEQLSSRFSQLWRNITGSPHKPFNPQTFTSAAWHFLLLAGLVFAFWWLVRLAALPLY
RKMGEWGRHKNRDRGNWLQLPLTIAGAFIIDLLLLALTLFVGQLLSDRLNGNNPTIAFQQSLFLNAFALIEFFKAILRLI
FCPRIPALRPFNLSDEAASYWSLRLSALSSLIGYGLIVAVPIISNQVNVQVGALANVVIMLCITLWALYLIFHNKAVITQ
GLIHLADHSLAFFSLFIRAFALVWHWLACAYFVVLFFFSLFDPGNSLKFMMGATLQSLAIIGGAALVSGILSRWIAKTIT
LSPATQRNYPELQKRLNGWISASLKAARILTVCVAIMLLLSAWGLFDFREWLHNDAGQKTVDVLIRIALILFFSAIGWTV
LASLIENRLASDIHGRPLPSARARTLLTLFRNALAVVISTITVMILLSEIGVNIAPLLAGAGALGLAISFGAQTLVKDII
TGIFIQFENGMNTGDLVTIGPLTGTVERMSIRSVGVRQDTGAYHIIPWSSITTFANFVRGIGSVVANYDVDRHEDLDKAS
QALKAAVDDLLAQEEIRGLIIGEPSFAGLVGLSNTAFTLRVSFTTLPLKQWTVRFALDTQVKKHFDRAGVRAPVQTWQQL
PMPGADSPAAE
>Mature_730_residues
PWILLLLAALFTAPLSAATLPGVPTANTDKNSASEPDVEQKRAAYAALADVLANDSARQELIDQLRKAAATPPPDSTPTL
TPPAVKEETTVLENVTQISREYGEQLSSRFSQLWRNITGSPHKPFNPQTFTSAAWHFLLLAGLVFAFWWLVRLAALPLYR
KMGEWGRHKNRDRGNWLQLPLTIAGAFIIDLLLLALTLFVGQLLSDRLNGNNPTIAFQQSLFLNAFALIEFFKAILRLIF
CPRIPALRPFNLSDEAASYWSLRLSALSSLIGYGLIVAVPIISNQVNVQVGALANVVIMLCITLWALYLIFHNKAVITQG
LIHLADHSLAFFSLFIRAFALVWHWLACAYFVVLFFFSLFDPGNSLKFMMGATLQSLAIIGGAALVSGILSRWIAKTITL
SPATQRNYPELQKRLNGWISASLKAARILTVCVAIMLLLSAWGLFDFREWLHNDAGQKTVDVLIRIALILFFSAIGWTVL
ASLIENRLASDIHGRPLPSARARTLLTLFRNALAVVISTITVMILLSEIGVNIAPLLAGAGALGLAISFGAQTLVKDIIT
GIFIQFENGMNTGDLVTIGPLTGTVERMSIRSVGVRQDTGAYHIIPWSSITTFANFVRGIGSVVANYDVDRHEDLDKASQ
ALKAAVDDLLAQEEIRGLIIGEPSFAGLVGLSNTAFTLRVSFTTLPLKQWTVRFALDTQVKKHFDRAGVRAPVQTWQQLP
MPGADSPAAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mscS (TC 1.A.23) family [H]

Homologues:

Organism=Escherichia coli, GI87081787, Length=732, Percent_Identity=80.327868852459, Blast_Score=1148, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010920
- InterPro:   IPR011066
- InterPro:   IPR006685
- InterPro:   IPR011014 [H]

Pfam domain/function: PF00924 MS_channel [H]

EC number: NA

Molecular weight: Translated: 80085; Mature: 79954

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: PS01246 UPF0003

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPWILLLLAALFTAPLSAATLPGVPTANTDKNSASEPDVEQKRAAYAALADVLANDSARQ
CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHH
ELIDQLRKAAATPPPDSTPTLTPPAVKEETTVLENVTQISREYGEQLSSRFSQLWRNITG
HHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SPHKPFNPQTFTSAAWHFLLLAGLVFAFWWLVRLAALPLYRKMGEWGRHKNRDRGNWLQL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEH
PLTIAGAFIIDLLLLALTLFVGQLLSDRLNGNNPTIAFQQSLFLNAFALIEFFKAILRLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH
FCPRIPALRPFNLSDEAASYWSLRLSALSSLIGYGLIVAVPIISNQVNVQVGALANVVIM
HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHH
LCITLWALYLIFHNKAVITQGLIHLADHSLAFFSLFIRAFALVWHWLACAYFVVLFFFSL
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FDPGNSLKFMMGATLQSLAIIGGAALVSGILSRWIAKTITLSPATQRNYPELQKRLNGWI
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
SASLKAARILTVCVAIMLLLSAWGLFDFREWLHNDAGQKTVDVLIRIALILFFSAIGWTV
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LASLIENRLASDIHGRPLPSARARTLLTLFRNALAVVISTITVMILLSEIGVNIAPLLAG
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHC
AGALGLAISFGAQTLVKDIITGIFIQFENGMNTGDLVTIGPLTGTVERMSIRSVGVRQDT
CCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCC
GAYHIIPWSSITTFANFVRGIGSVVANYDVDRHEDLDKASQALKAAVDDLLAQEEIRGLI
CCEEEEECHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCEEE
IGEPSFAGLVGLSNTAFTLRVSFTTLPLKQWTVRFALDTQVKKHFDRAGVRAPVQTWQQL
ECCCCHHHHEECCCCEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHC
PMPGADSPAAE
CCCCCCCCCCC
>Mature Secondary Structure 
PWILLLLAALFTAPLSAATLPGVPTANTDKNSASEPDVEQKRAAYAALADVLANDSARQ
CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHH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CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]