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The map label for this gene is pal [H]

Identifier: 238893777

GI number: 238893777

Start: 1645454

End: 1646002

Strand: Direct

Name: pal [H]

Synonym: KP1_1704

Alternate gene names: 238893777

Gene position: 1645454-1646002 (Clockwise)

Preceding gene: 238893776

Following gene: 238893778

Centisome position: 31.35

GC content: 51.55

Gene sequence:

>549_bases
TTGATTATTAAAGGAATCAAAGAAATGCAACTGAACAAAGTGCTGAAAGGGCTGATGATCGCTCTGCCGGTTATGGCAAT
CGCGGCATGTTCTTCTAACAAGAACGCCAGCAACGACCAGAGCGGTGAAGGCATGCTGGGTGCCGGCACTGGTATGGACG
CTAACGGTAACGGCGGCAACATGTCTTCTGAAGAGCAAGCTCGTCTGCAGATGCAGCAGCTGCAGCAGAACAACATCGTT
TACTTCGATCTCGACAAGTACGATATCCGTTCTGACTTCGCTGCTATGCTGGACGCGCACGCTAACTTCCTGCGCAGCAA
CCCGTCCTACAAAGTGACTGTAGAAGGTCACGCGGATGAGCGCGGTACGCCGGAATACAACATCGCTCTGGGTGAGCGTC
GTGCTAACGCCGTTAAGATGTATCTGCAGGGCAAAGGTGTTTCTGCCGATCAGATCTCCATCGTTTCTTACGGTAAAGAA
AAACCAGCAGTACTGGGTCATGACGAAGCGGCATATGCCAAAAACCGTCGCGCCGTACTGGTTTACTAA

Upstream 100 bases:

>100_bases
AATCTGGTTTCTACAGATGGGCGTTTCAAAGCGCGTCTTCCGGCAACTGATGGACAGGTAAAATCGCCTGCCTGGTCGCC
GTATCTGTGATAATAAATAA

Downstream 100 bases:

>100_bases
GAGAATTGCATGAGCAGTAACTTCAGACATCATTTATTGAGTCTGTCGTTACTGGTTGGCATAGCGGCCCCCTGGGCCGC
TTTTGCTCAGGCGCCAATCA

Product: peptidoglycan-associated outer membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MIIKGIKEMQLNKVLKGLMIALPVMAIAACSSNKNASNDQSGEGMLGAGTGMDANGNGGNMSSEEQARLQMQQLQQNNIV
YFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADERGTPEYNIALGERRANAVKMYLQGKGVSADQISIVSYGKE
KPAVLGHDEAAYAKNRRAVLVY

Sequences:

>Translated_182_residues
MIIKGIKEMQLNKVLKGLMIALPVMAIAACSSNKNASNDQSGEGMLGAGTGMDANGNGGNMSSEEQARLQMQQLQQNNIV
YFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADERGTPEYNIALGERRANAVKMYLQGKGVSADQISIVSYGKE
KPAVLGHDEAAYAKNRRAVLVY
>Mature_182_residues
MIIKGIKEMQLNKVLKGLMIALPVMAIAACSSNKNASNDQSGEGMLGAGTGMDANGNGGNMSSEEQARLQMQQLQQNNIV
YFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADERGTPEYNIALGERRANAVKMYLQGKGVSADQISIVSYGKE
KPAVLGHDEAAYAKNRRAVLVY

Specific function: Thought to play a role in bacterial envelope integrity. Very strongly associated with the peptidoglycan [H]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1786962, Length=174, Percent_Identity=95.9770114942529, Blast_Score=313, Evalue=6e-87,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665
- InterPro:   IPR014169 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 19777; Mature: 19777

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01068 OMPA_1 ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIKGIKEMQLNKVLKGLMIALPVMAIAACSSNKNASNDQSGEGMLGAGTGMDANGNGGN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCC
MSSEEQARLQMQQLQQNNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADE
CCCHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC
RGTPEYNIALGERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYAKNRRAVL
CCCCCEEEEECCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCEECCCHHHHHCCCCEEE
VY
EC
>Mature Secondary Structure
MIIKGIKEMQLNKVLKGLMIALPVMAIAACSSNKNASNDQSGEGMLGAGTGMDANGNGGN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCC
MSSEEQARLQMQQLQQNNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADE
CCCHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC
RGTPEYNIALGERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYAKNRRAVL
CCCCCEEEEECCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCEECCCHHHHHCCCCEEE
VY
EC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]