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The map label for this gene is kdpE [H]

Identifier: 238893742

GI number: 238893742

Start: 1607147

End: 1607824

Strand: Reverse

Name: kdpE [H]

Synonym: KP1_1666

Alternate gene names: 238893742

Gene position: 1607824-1607147 (Counterclockwise)

Preceding gene: 238893743

Following gene: 238893738

Centisome position: 30.63

GC content: 60.77

Gene sequence:

>678_bases
GTGATTAACGTTCTGATTATCGAAGACGAACACGCTATCCGACGCTTTCTGCGCACCGCGCTGGAAGCCGACGGCATGCG
CGTATTTGAAGCGGAAACCCTGCAGCGTGGGCTGATTGAAGCCGCCACCCGTAAGCCCGACCTCGCGATCCTCGATCTCG
GCCTGCCGGATGGCGACGGCATTGATTTTATTCGCGACCTGCGTCAGTGGAGCCAGATGCCGATTATCGTCCTGTCAGCG
CGTAGCGAAGAGCATGACAAAATTGCCGCCCTGGATGCCGGCGCCGATGACTACTTAAGTAAACCCTTTGGCATCGGCGA
GCTGCAGGCCCGCCTGCGCGTCGCGCTGCGTCGCCATGGCGCGGCGCAGGCCGATGAGCCGGTGGTGCGCTTCGCTGACC
TGGAGGTCAATATCCCCGCCCGCCGCATCCTGCGCGGCAGCGAAGAGATCCACCTGACGCCTATCGAGTTTCGCCTGCTG
GCGGCACTGTTGAATAATCCCGGCAAAGTGCTTACCCAGCGCCAGCTGCTGAATCAGGTGTGGGGGCCTAACACCGTGGA
GCACAGCCACTATCTGCGGATCTATATGGGTCATCTGCGACAAAAGCTGGAGGCCGATCCGGCACGGCCGCAGCATTTGC
TGACCGAAACCGGGATTGGCTATCGCTTTATGCCCTGA

Upstream 100 bases:

>100_bases
GGACCATCTCCGCCAGCAACCGGCCCGAGGGCGGCGCCTCATTCCGTGTTACACTGCCTGGAGAAACGCCCCCTGAACTG
GAAGAGCTACCTGAGGAATT

Downstream 100 bases:

>100_bases
ATCCCGCCTCTGCAGTACCAGAGGCTGGCGATTTTCAGCCCTTCAGAGAGCAGCAGAAAGCCTGCCAGGATCGCTAAATG
CCGGACGCCGGCAGCCTGAA

Product: transcriptional effector for high-affinity potassium transport system

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MINVLIIEDEHAIRRFLRTALEADGMRVFEAETLQRGLIEAATRKPDLAILDLGLPDGDGIDFIRDLRQWSQMPIIVLSA
RSEEHDKIAALDAGADDYLSKPFGIGELQARLRVALRRHGAAQADEPVVRFADLEVNIPARRILRGSEEIHLTPIEFRLL
AALLNNPGKVLTQRQLLNQVWGPNTVEHSHYLRIYMGHLRQKLEADPARPQHLLTETGIGYRFMP

Sequences:

>Translated_225_residues
MINVLIIEDEHAIRRFLRTALEADGMRVFEAETLQRGLIEAATRKPDLAILDLGLPDGDGIDFIRDLRQWSQMPIIVLSA
RSEEHDKIAALDAGADDYLSKPFGIGELQARLRVALRRHGAAQADEPVVRFADLEVNIPARRILRGSEEIHLTPIEFRLL
AALLNNPGKVLTQRQLLNQVWGPNTVEHSHYLRIYMGHLRQKLEADPARPQHLLTETGIGYRFMP
>Mature_225_residues
MINVLIIEDEHAIRRFLRTALEADGMRVFEAETLQRGLIEAATRKPDLAILDLGLPDGDGIDFIRDLRQWSQMPIIVLSA
RSEEHDKIAALDAGADDYLSKPFGIGELQARLRVALRRHGAAQADEPVVRFADLEVNIPARRILRGSEEIHLTPIEFRLL
AALLNNPGKVLTQRQLLNQVWGPNTVEHSHYLRIYMGHLRQKLEADPARPQHLLTETGIGYRFMP

Specific function: Member of the two-component regulatory system kdpD/kdpE involved in the regulation of the kdp operon [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786911, Length=224, Percent_Identity=84.375, Blast_Score=389, Evalue=1e-110,
Organism=Escherichia coli, GI1786599, Length=223, Percent_Identity=35.8744394618834, Blast_Score=144, Evalue=4e-36,
Organism=Escherichia coli, GI1787375, Length=224, Percent_Identity=35.2678571428571, Blast_Score=135, Evalue=2e-33,
Organism=Escherichia coli, GI1789809, Length=232, Percent_Identity=35.7758620689655, Blast_Score=133, Evalue=9e-33,
Organism=Escherichia coli, GI1790860, Length=223, Percent_Identity=36.7713004484305, Blast_Score=130, Evalue=5e-32,
Organism=Escherichia coli, GI1786784, Length=221, Percent_Identity=37.5565610859729, Blast_Score=125, Evalue=2e-30,
Organism=Escherichia coli, GI1790552, Length=224, Percent_Identity=33.9285714285714, Blast_Score=119, Evalue=1e-28,
Organism=Escherichia coli, GI1790863, Length=229, Percent_Identity=31.8777292576419, Blast_Score=112, Evalue=1e-26,
Organism=Escherichia coli, GI1788394, Length=230, Percent_Identity=33.0434782608696, Blast_Score=111, Evalue=4e-26,
Organism=Escherichia coli, GI87082012, Length=223, Percent_Identity=30.9417040358744, Blast_Score=110, Evalue=9e-26,
Organism=Escherichia coli, GI1789402, Length=223, Percent_Identity=34.5291479820628, Blast_Score=104, Evalue=4e-24,
Organism=Escherichia coli, GI1787229, Length=227, Percent_Identity=32.15859030837, Blast_Score=101, Evalue=4e-23,
Organism=Escherichia coli, GI2367329, Length=209, Percent_Identity=31.1004784688995, Blast_Score=91, Evalue=7e-20,
Organism=Escherichia coli, GI145693140, Length=245, Percent_Identity=26.530612244898, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1788550, Length=115, Percent_Identity=33.0434782608696, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1790299, Length=121, Percent_Identity=30.5785123966942, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 25471; Mature: 25471

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINVLIIEDEHAIRRFLRTALEADGMRVFEAETLQRGLIEAATRKPDLAILDLGLPDGDG
CEEEEEECCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC
IDFIRDLRQWSQMPIIVLSARSEEHDKIAALDAGADDYLSKPFGIGELQARLRVALRRHG
HHHHHHHHHHHCCCEEEEECCCCCCCEEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHCC
AAQADEPVVRFADLEVNIPARRILRGSEEIHLTPIEFRLLAALLNNPGKVLTQRQLLNQV
CCCCCCCEEEEEEEEECCCHHHHHCCCCCEEECHHHHHHHHHHHCCCHHHHHHHHHHHHH
WGPNTVEHSHYLRIYMGHLRQKLEADPARPQHLLTETGIGYRFMP
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCEEECC
>Mature Secondary Structure
MINVLIIEDEHAIRRFLRTALEADGMRVFEAETLQRGLIEAATRKPDLAILDLGLPDGDG
CEEEEEECCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC
IDFIRDLRQWSQMPIIVLSARSEEHDKIAALDAGADDYLSKPFGIGELQARLRVALRRHG
HHHHHHHHHHHCCCEEEEECCCCCCCEEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHCC
AAQADEPVVRFADLEVNIPARRILRGSEEIHLTPIEFRLLAALLNNPGKVLTQRQLLNQV
CCCCCCCEEEEEEEEECCCHHHHHCCCCCEEECHHHHHHHHHHHCCCHHHHHHHHHHHHH
WGPNTVEHSHYLRIYMGHLRQKLEADPARPQHLLTETGIGYRFMP
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1532388; 8905232; 9278503 [H]