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The map label for this gene is ybdQ [H]

Identifier: 238893686

GI number: 238893686

Start: 1549945

End: 1550373

Strand: Reverse

Name: ybdQ [H]

Synonym: KP1_1605

Alternate gene names: 238893686

Gene position: 1550373-1549945 (Counterclockwise)

Preceding gene: 238893687

Following gene: 238893683

Centisome position: 29.54

GC content: 56.41

Gene sequence:

>429_bases
ATGTATAAGACTATCATTATGCCGGTTGATGTCTTTGAGATGGCGCTGAGCGATAAAGCCGTCCGGCACGCGGAGTTTCT
GGCCCAGCAGGACGGGGTGATCCATCTGCTCCACGTCTTACCGGGTTCCGCGAGCTTTACCATGAGCCGTTTTACCGCCG
ACCTGCGGCGGTTTGAGGAACATCTGCAGCATGAGGCGGAGACTCGCCTGCAGACGATGGTCAGCCACTTCAGCATTGAC
CCGTCTCGTATCAAGCTACATGTCCGTTTTGGCAGCGTGCGCGATATGGTCAACGAGCTGGCCAGCGAAATTAACGCCGA
CGTGGTAGTTATTGGCTCACGCAATCCCTCCATCAGTACCCACCTGCTCGGCTCCAATGCCTCGAGCGTGATCCGCCATG
CCCATATCCCGGTAATGGTCGTCAGGTAA

Upstream 100 bases:

>100_bases
ACGCTTTGCGCCTGCCTGGCTGACAGTTTTGCGACCTGAATGACACAATATCCGCATATAATATGTTGATATAGACGCAA
ACGAACAAGGAGGATTGCAT

Downstream 100 bases:

>100_bases
GAATGACGAAAAGAGCATAAAAAAAGAGGCTACCCCTGGGTAGCCTCTTTGTTATGCAGGTCTATTGTCTGACTTGTTAT
GCGGTTTTCGTGCGGATCAG

Product: universal stress protein G

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MYKTIIMPVDVFEMALSDKAVRHAEFLAQQDGVIHLLHVLPGSASFTMSRFTADLRRFEEHLQHEAETRLQTMVSHFSID
PSRIKLHVRFGSVRDMVNELASEINADVVVIGSRNPSISTHLLGSNASSVIRHAHIPVMVVR

Sequences:

>Translated_142_residues
MYKTIIMPVDVFEMALSDKAVRHAEFLAQQDGVIHLLHVLPGSASFTMSRFTADLRRFEEHLQHEAETRLQTMVSHFSID
PSRIKLHVRFGSVRDMVNELASEINADVVVIGSRNPSISTHLLGSNASSVIRHAHIPVMVVR
>Mature_142_residues
MYKTIIMPVDVFEMALSDKAVRHAEFLAQQDGVIHLLHVLPGSASFTMSRFTADLRRFEEHLQHEAETRLQTMVSHFSID
PSRIKLHVRFGSVRDMVNELASEINADVVVIGSRNPSISTHLLGSNASSVIRHAHIPVMVVR

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

Organism=Escherichia coli, GI1786824, Length=142, Percent_Identity=86.6197183098592, Blast_Score=252, Evalue=8e-69,
Organism=Escherichia coli, GI87081893, Length=146, Percent_Identity=36.986301369863, Blast_Score=97, Evalue=6e-22,

Paralogues:

None

Copy number: 180 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 120 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006015
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 15953; Mature: 15953

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKTIIMPVDVFEMALSDKAVRHAEFLAQQDGVIHLLHVLPGSASFTMSRFTADLRRFEE
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
HLQHEAETRLQTMVSHFSIDPSRIKLHVRFGSVRDMVNELASEINADVVVIGSRNPSIST
HHHHHHHHHHHHHHHHHCCCHHHEEEEEEECHHHHHHHHHHHHCCCCEEEEECCCCCCEE
HLLGSNASSVIRHAHIPVMVVR
EEECCCHHHHHHHCCCCEEEEC
>Mature Secondary Structure
MYKTIIMPVDVFEMALSDKAVRHAEFLAQQDGVIHLLHVLPGSASFTMSRFTADLRRFEE
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
HLQHEAETRLQTMVSHFSIDPSRIKLHVRFGSVRDMVNELASEINADVVVIGSRNPSIST
HHHHHHHHHHHHHHHHHCCCHHHEEEEEEECHHHHHHHHHHHHCCCCEEEEECCCCCCEE
HLLGSNASSVIRHAHIPVMVVR
EEECCCHHHHHHHCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]