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The map label for this gene is codA [H]

Identifier: 238893664

GI number: 238893664

Start: 1525158

End: 1526396

Strand: Reverse

Name: codA [H]

Synonym: KP1_1582

Alternate gene names: 238893664

Gene position: 1526396-1525158 (Counterclockwise)

Preceding gene: 238893665

Following gene: 238893663

Centisome position: 29.08

GC content: 63.28

Gene sequence:

>1239_bases
ATGAAAATTATTAACGCTCGCCTGCGCCGCCAGGAGGCGCTGTTTACCCTTGACCTGCAGGACGGGATAATTCACCGCAT
CACCGCCCAGGCCGCGATGCAGACTGCCGACGCCGGGGCTATCGACGCCCAGGGCCGGCTGGCGATCCCGCCCTTCGTCG
AGCCGCATATCCATCTTGACGCCACCCTCACCGCGGGTGAGCCGGAGTGGAACCGCAGCGGCACCCTGTTTGAAGGCATC
ACCCGCTGGAGCCAGCGCAAAGCGAGTATTACTCCGGAGGACACCCGCCAGCGGGCGCTGAAAACCATCGGCATGCTGCG
CGATTTCGGCGTCCAGCACGTCCGCACCCATGTGGATGTCACCGACCCGTCGCTGGCGGCCCTGCAGGCGCTGCTGGCGG
TGAAACAAGAGGCCGCCGATCTCATCGATCTGCAGATTGTCGCCTTTCCGCAGGAGGGAATCGAATCGTATCCCAACGGC
CGGGAGCTGATGACGCGCGCCATCGAGATGGGCGCCGACGTGGTGGGCGGCATTCCGCACTATGAGAACACCCGTGACAA
AGGGGTCAGCTCGGTGATGTTTTTGATGGACCTCGCCCAGCGTTACGGCCGCCTGGTGGATGTCCACTGCGATGAAATCG
ACGATCCGCAGTCGCGTTTCCTCGAAGTGCTGGCGGAAGAGGCGCGGGTGCGCGGCATGGGGGCGCAGGTCACCGCCAGC
CACACCTGCGCGATGGGCTCTTATGATAACGCCTACTGCTCAAAGCTGTTTCGCCTGCTGAAAGCCTCGGGCATCAACTT
CATCTCCTGCCCGACCGAAAGCATTCATCTGCAGGGCCGGTTTGACAGCTGGCCGAAACGGCGCGGCGTCACCCGGGTGG
CGGAGCTGGATCGCGCCGGCATCAATGTCTGCTTTGCCCAGGACTCGATTCAGGATCCGTGGTATCCGCTGGGGAACGGC
AATATCCTGCGCATTCTGGATGCCGGACTGCACATCTGCCATATGCTCGGCTATGACGATCTGCAGCGCTGCCTCGACTT
CGTCACCGACAACAGCGCCCGGGCGCTGTGTCTGGGCGATAACTACGGCCTCGCCGAAGGCCGCCCGGCGAACCTGCTGA
TCCTCGATGCTGAAAACGACTACGAGGCCGTCCGCCGTCAGGCACGGGTGCTGACCTCCATTCGCCACGGCAGGGTGATT
TTGCAGCGTGAGGTGGAGCACATCCGCTACCCGGCATAG

Upstream 100 bases:

>100_bases
AACTGACCGGCTACCCGGTCAGCCACCCTCAGTTTCATCTCAACGCCTCGGTCGCGCTGGTGATCTGGCGTTTATCGCAA
AACCATTTACAGGACCCACC

Downstream 100 bases:

>100_bases
GGCGCAAGGCGCTGCGCGACGACGCCTTTCTGTGATACCTTTTCAGGCAGTGTGCGTGACCGACGCCCGCCCGGGCGTCG
GCTTCCTGGAAAACAGACGG

Product: putative cytosine deaminase and related metal-dependent hydrolases

Products: NA

Alternate protein names: Cytosine aminohydrolase [H]

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MKIINARLRRQEALFTLDLQDGIIHRITAQAAMQTADAGAIDAQGRLAIPPFVEPHIHLDATLTAGEPEWNRSGTLFEGI
TRWSQRKASITPEDTRQRALKTIGMLRDFGVQHVRTHVDVTDPSLAALQALLAVKQEAADLIDLQIVAFPQEGIESYPNG
RELMTRAIEMGADVVGGIPHYENTRDKGVSSVMFLMDLAQRYGRLVDVHCDEIDDPQSRFLEVLAEEARVRGMGAQVTAS
HTCAMGSYDNAYCSKLFRLLKASGINFISCPTESIHLQGRFDSWPKRRGVTRVAELDRAGINVCFAQDSIQDPWYPLGNG
NILRILDAGLHICHMLGYDDLQRCLDFVTDNSARALCLGDNYGLAEGRPANLLILDAENDYEAVRRQARVLTSIRHGRVI
LQREVEHIRYPA

Sequences:

>Translated_412_residues
MKIINARLRRQEALFTLDLQDGIIHRITAQAAMQTADAGAIDAQGRLAIPPFVEPHIHLDATLTAGEPEWNRSGTLFEGI
TRWSQRKASITPEDTRQRALKTIGMLRDFGVQHVRTHVDVTDPSLAALQALLAVKQEAADLIDLQIVAFPQEGIESYPNG
RELMTRAIEMGADVVGGIPHYENTRDKGVSSVMFLMDLAQRYGRLVDVHCDEIDDPQSRFLEVLAEEARVRGMGAQVTAS
HTCAMGSYDNAYCSKLFRLLKASGINFISCPTESIHLQGRFDSWPKRRGVTRVAELDRAGINVCFAQDSIQDPWYPLGNG
NILRILDAGLHICHMLGYDDLQRCLDFVTDNSARALCLGDNYGLAEGRPANLLILDAENDYEAVRRQARVLTSIRHGRVI
LQREVEHIRYPA
>Mature_412_residues
MKIINARLRRQEALFTLDLQDGIIHRITAQAAMQTADAGAIDAQGRLAIPPFVEPHIHLDATLTAGEPEWNRSGTLFEGI
TRWSQRKASITPEDTRQRALKTIGMLRDFGVQHVRTHVDVTDPSLAALQALLAVKQEAADLIDLQIVAFPQEGIESYPNG
RELMTRAIEMGADVVGGIPHYENTRDKGVSSVMFLMDLAQRYGRLVDVHCDEIDDPQSRFLEVLAEEARVRGMGAQVTAS
HTCAMGSYDNAYCSKLFRLLKASGINFISCPTESIHLQGRFDSWPKRRGVTRVAELDRAGINVCFAQDSIQDPWYPLGNG
NILRILDAGLHICHMLGYDDLQRCLDFVTDNSARALCLGDNYGLAEGRPANLLILDAENDYEAVRRQARVLTSIRHGRVI
LQREVEHIRYPA

Specific function: Unknown

COG id: COG0402

COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786531, Length=398, Percent_Identity=58.7939698492462, Blast_Score=485, Evalue=1e-138,
Organism=Escherichia coli, GI1786517, Length=409, Percent_Identity=24.9388753056235, Blast_Score=93, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: =3.5.4.1 [H]

Molecular weight: Translated: 45922; Mature: 45922

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIINARLRRQEALFTLDLQDGIIHRITAQAAMQTADAGAIDAQGRLAIPPFVEPHIHLD
CCCHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCEEEE
ATLTAGEPEWNRSGTLFEGITRWSQRKASITPEDTRQRALKTIGMLRDFGVQHVRTHVDV
EEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHCCCC
TDPSLAALQALLAVKQEAADLIDLQIVAFPQEGIESYPNGRELMTRAIEMGADVVGGIPH
CCHHHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHCCCHHHHHHHHHHHCHHHHCCCCC
YENTRDKGVSSVMFLMDLAQRYGRLVDVHCDEIDDPQSRFLEVLAEEARVRGMGAQVTAS
CCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEECC
HTCAMGSYDNAYCSKLFRLLKASGINFISCPTESIHLQGRFDSWPKRRGVTRVAELDRAG
CEEECCCCCHHHHHHHHHHHHHCCCCEEECCCCEEEEEECCCCCHHHCCCHHHHHHHHCC
INVCFAQDSIQDPWYPLGNGNILRILDAGLHICHMLGYDDLQRCLDFVTDNSARALCLGD
CEEEEECCCCCCCCEECCCCCEEEEHHHHHHHHHHHCHHHHHHHHHHHCCCCCCEEEEEC
NYGLAEGRPANLLILDAENDYEAVRRQARVLTSIRHGRVILQREVEHIRYPA
CCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKIINARLRRQEALFTLDLQDGIIHRITAQAAMQTADAGAIDAQGRLAIPPFVEPHIHLD
CCCHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCEEEE
ATLTAGEPEWNRSGTLFEGITRWSQRKASITPEDTRQRALKTIGMLRDFGVQHVRTHVDV
EEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHCCCC
TDPSLAALQALLAVKQEAADLIDLQIVAFPQEGIESYPNGRELMTRAIEMGADVVGGIPH
CCHHHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHCCCHHHHHHHHHHHCHHHHCCCCC
YENTRDKGVSSVMFLMDLAQRYGRLVDVHCDEIDDPQSRFLEVLAEEARVRGMGAQVTAS
CCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEECC
HTCAMGSYDNAYCSKLFRLLKASGINFISCPTESIHLQGRFDSWPKRRGVTRVAELDRAG
CEEECCCCCHHHHHHHHHHHHHCCCCEEECCCCEEEEEECCCCCHHHCCCHHHHHHHHCC
INVCFAQDSIQDPWYPLGNGNILRILDAGLHICHMLGYDDLQRCLDFVTDNSARALCLGD
CEEEEECCCCCCCCEECCCCCEEEEHHHHHHHHHHHCHHHHHHHHHHHCCCCCCEEEEEC
NYGLAEGRPANLLILDAENDYEAVRRQARVLTSIRHGRVILQREVEHIRYPA
CCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1640834; 8450832; 9278503 [H]