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The map label for this gene is ybdJ [C]

Identifier: 238893583

GI number: 238893583

Start: 1432525

End: 1432773

Strand: Reverse

Name: ybdJ [C]

Synonym: KP1_1493

Alternate gene names: 238893583

Gene position: 1432773-1432525 (Counterclockwise)

Preceding gene: 238893584

Following gene: 238893580

Centisome position: 27.3

GC content: 57.83

Gene sequence:

>249_bases
ATGAAACATCCACTGGAAACGCTGCTCTCCGCCGCCGGGATCTTACTGCTGGCCCTGCTCTCCTGTCTGCTGTTGCCCGC
GCCTTCGCTGGGCCTGACGCTGGCGCAAAAGCTGGTTGAGACATTCCATATGATGGATCTCAACCAGCTCTATACGGTGC
TGTTTTGTCTGTGGTTCTTAGCGCTGGGCGCCATTGAGTATCTGGTGCTGCGCTGGGTGTGGCGTCGCTGGTTTTCCCTC
GAGCGGTAA

Upstream 100 bases:

>100_bases
ATTTAAAATAGTCGTGTTATAGCGAGTAAAAAAACAAAGCATATTGCGTTAAGCATTATTTTACCGGACAATATGTTTTT
TAACTGATGATTAACATGAC

Downstream 100 bases:

>100_bases
ACCAGGAGAGGCGCGCCTCAGTGGGCGCGACTGTGGTTCTCTTTGCGGTAGGCGCCCGGCGGCTGATTGAAGGTCCGGGT
AAAGACGCGGGTAAAAGTCT

Product: putative inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MKHPLETLLSAAGILLLALLSCLLLPAPSLGLTLAQKLVETFHMMDLNQLYTVLFCLWFLALGAIEYLVLRWVWRRWFSL
ER

Sequences:

>Translated_82_residues
MKHPLETLLSAAGILLLALLSCLLLPAPSLGLTLAQKLVETFHMMDLNQLYTVLFCLWFLALGAIEYLVLRWVWRRWFSL
ER
>Mature_82_residues
MKHPLETLLSAAGILLLALLSCLLLPAPSLGLTLAQKLVETFHMMDLNQLYTVLFCLWFLALGAIEYLVLRWVWRRWFSL
ER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786794, Length=80, Percent_Identity=81.25, Blast_Score=110, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YBDJ_KLEPN (Q48414)

Other databases:

- EMBL:   U19581
- PIR:   T09628
- InterPro:   IPR010590
- ProDom:   PD027061

Pfam domain/function: PF06643 DUF1158

EC number: NA

Molecular weight: Translated: 9487; Mature: 9487

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1a4e47dc)-; HASH(0x1adfe77c)-;

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHPLETLLSAAGILLLALLSCLLLPAPSLGLTLAQKLVETFHMMDLNQLYTVLFCLWFL
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALGAIEYLVLRWVWRRWFSLER
HHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure
MKHPLETLLSAAGILLLALLSCLLLPAPSLGLTLAQKLVETFHMMDLNQLYTVLFCLWFL
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALGAIEYLVLRWVWRRWFSLER
HHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7551053