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The map label for this gene is ybdF [H]

Identifier: 238893579

GI number: 238893579

Start: 1429891

End: 1430259

Strand: Reverse

Name: ybdF [H]

Synonym: KP1_1488

Alternate gene names: 238893579

Gene position: 1430259-1429891 (Counterclockwise)

Preceding gene: 238893580

Following gene: 238893578

Centisome position: 27.25

GC content: 56.37

Gene sequence:

>369_bases
ATGACGCCGGAAACACTGCATCCCTGCGCTCACCGTATCGCCCTGACCTACCCGTTTACCGAACACTGCTGGCCCTTTGG
GCCAGAGTACGACGTGTTTAAGGTCGACGGCCGCATCTTTATGATCACCATGACTATTCGCGGGCGGGCGCTGGTCAATC
TCAAGGCCGAGCCGCAGAAGTCGCTGCTGAATCAGCAAATTTATCGCAGTATCGAACCCGGCTACCATATGAACAAGAAA
CACTGGATCACGGTGGTGCCAGGAGAGGATATCAGCGAGGATCTGCTGGCCGAGCTGATTGACGATTCGTGGCATCAGGT
GGTGAACAAGCTGAGTAAAAAGGCGCAGCAGCGCCTGCGTCCGCGCTGA

Upstream 100 bases:

>100_bases
CCACCATCGAATTCGCCAGCCACGATCCGCAGCGCGCCCGGGAGATTATCGCCCTCGGCTTTGAAGCCATGTGGCACGCC
CTGCATGAGGCGGACGCCTA

Downstream 100 bases:

>100_bases
TTTTCAGCCAAATGCGATAAGTGTTATCGCATTTTTCACCCTTATCATTTTGCGATCTTCGCTGTACTCTTCCTCTCCTG
AACGCACCGGTAAGGTGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 121

Protein sequence:

>122_residues
MTPETLHPCAHRIALTYPFTEHCWPFGPEYDVFKVDGRIFMITMTIRGRALVNLKAEPQKSLLNQQIYRSIEPGYHMNKK
HWITVVPGEDISEDLLAELIDDSWHQVVNKLSKKAQQRLRPR

Sequences:

>Translated_122_residues
MTPETLHPCAHRIALTYPFTEHCWPFGPEYDVFKVDGRIFMITMTIRGRALVNLKAEPQKSLLNQQIYRSIEPGYHMNKK
HWITVVPGEDISEDLLAELIDDSWHQVVNKLSKKAQQRLRPR
>Mature_121_residues
TPETLHPCAHRIALTYPFTEHCWPFGPEYDVFKVDGRIFMITMTIRGRALVNLKAEPQKSLLNQQIYRSIEPGYHMNKKH
WITVVPGEDISEDLLAELIDDSWHQVVNKLSKKAQQRLRPR

Specific function: Unknown

COG id: COG2315

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786793, Length=121, Percent_Identity=62.8099173553719, Blast_Score=172, Evalue=7e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007351 [H]

Pfam domain/function: PF04237 DUF419 [H]

EC number: NA

Molecular weight: Translated: 14282; Mature: 14151

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPETLHPCAHRIALTYPFTEHCWPFGPEYDVFKVDGRIFMITMTIRGRALVNLKAEPQK
CCCCCCCHHHHHEEEECCCHHCCCCCCCCCCEEEECCEEEEEEEEECCEEEEEECCCCHH
SLLNQQIYRSIEPGYHMNKKHWITVVPGEDISEDLLAELIDDSWHQVVNKLSKKAQQRLR
HHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PR
CC
>Mature Secondary Structure 
TPETLHPCAHRIALTYPFTEHCWPFGPEYDVFKVDGRIFMITMTIRGRALVNLKAEPQK
CCCCCCHHHHHEEEECCCHHCCCCCCCCCCEEEECCEEEEEEEEECCEEEEEECCCCHH
SLLNQQIYRSIEPGYHMNKKHWITVVPGEDISEDLLAELIDDSWHQVVNKLSKKAQQRLR
HHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]