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The map label for this gene is yncE [H]

Identifier: 238893559

GI number: 238893559

Start: 1405827

End: 1406933

Strand: Direct

Name: yncE [H]

Synonym: KP1_1465

Alternate gene names: 238893559

Gene position: 1405827-1406933 (Clockwise)

Preceding gene: 238893558

Following gene: 238893560

Centisome position: 26.79

GC content: 56.46

Gene sequence:

>1107_bases
TTGATTTTTTATAGGGTTGATCCAATGAAATACACACTTCCGGCGTTGACGCTGGCCATCAGCGCGGCGTTAAGCGGCTG
CGCGACGCCTCATTCCTCTGCCGTTTCCCAACCGGTTGTCGACTCGCCAGTCCCTAACGTGGCGCAACCGCTGCAGCGCC
AGCTAGCGGAAGGGCTGTACGAGATGGCGTTAAGCCCGCAGGGTGATGCGCTGTACGTCGCCAGCGCTGAAGGCTTTAAA
AATGTACAGGGCGGGGCGGTTTACACACTGGATCCGCACACCCTCAATACCATCGGCCTGACGCATACCGATCTGAAAAA
CTTCGCTTTACAGCTCTCTGCGGAGGGTAAAACGCTGTATGTCAGCAATTCGCTGGACGGCGGCATCAGCGCTATCGACA
CCGCCACCGGCAAGGTAAAAAACCGCCTGCTGTTCAGCGAGCGCAATGAAAAAGGTCGCCCTTATGGGGCCCGTCAGCTG
CTGTTGCTGAATAATACTCTCTACGTTGGCGCGGTCGCCGACCCGGCGCAAATCTGGGTGGTTGACGCCACTACCCTGAA
GCTGAAAACGCGGATTAAAAATACCGGTAAATGGATGACCGGCCTGCACTACTCCGCGCAAACCGGTCGCGTGTACGCCG
CTAACGGCAGCGGTGAAATTCTGGTGATCAACCCGCGTAACCAACGCATTGAACAGCGCTGGAAGCCGCTGGGCGACAAG
CCGGCGCTGCTGCTTAATATGGCCGAAGATAGCGACACCGGCCGTCTGTTCGTGACCGACAACTCGAAAGCGAAAACCAC
TCTGGTGCTGGATATCCACAGCGGCAAGCTGCTTAAACAGCTCGACGTCGGCGATTCGCTGGCGGTGCAGTTCAATAAGA
AACGCCACGAAATTTATATTTCACAGCGTGAATCCGGCAAGGTCATTAGCCTTGACGCCAGCCGCTACACGCTGAAGAAA
AGCTGGGCGCTGCCGGCCAATCCCAACAGCCTGCTGCTTTCCGCCGATGGTCAGACGCTGTTTGTCACCGTCAAACAGCC
CTTCAATAAAGACCACTCCACTAAAGGCCCGGACAGCGTCGTACGTATCGACCTGAACGCGCAATAA

Upstream 100 bases:

>100_bases
CGCCAGTGAGTCGTTCACTAAGAGTCGCGAAGGCGTAGGGTGACGTAAAGACAGCAGGCTGGAAACACACAATATCGGCC
GCTGCGCGTCCATCGGGTCA

Downstream 100 bases:

>100_bases
AAATAACGGGTCCGGCGACGGGCCCTTTGATTCATTTATCCTCATCCATGGGGCAAATTATGCACACCACGCACTATTCA
TCCTTCCCGCTGCGTAAAAC

Product: putative periplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MIFYRVDPMKYTLPALTLAISAALSGCATPHSSAVSQPVVDSPVPNVAQPLQRQLAEGLYEMALSPQGDALYVASAEGFK
NVQGGAVYTLDPHTLNTIGLTHTDLKNFALQLSAEGKTLYVSNSLDGGISAIDTATGKVKNRLLFSERNEKGRPYGARQL
LLLNNTLYVGAVADPAQIWVVDATTLKLKTRIKNTGKWMTGLHYSAQTGRVYAANGSGEILVINPRNQRIEQRWKPLGDK
PALLLNMAEDSDTGRLFVTDNSKAKTTLVLDIHSGKLLKQLDVGDSLAVQFNKKRHEIYISQRESGKVISLDASRYTLKK
SWALPANPNSLLLSADGQTLFVTVKQPFNKDHSTKGPDSVVRIDLNAQ

Sequences:

>Translated_368_residues
MIFYRVDPMKYTLPALTLAISAALSGCATPHSSAVSQPVVDSPVPNVAQPLQRQLAEGLYEMALSPQGDALYVASAEGFK
NVQGGAVYTLDPHTLNTIGLTHTDLKNFALQLSAEGKTLYVSNSLDGGISAIDTATGKVKNRLLFSERNEKGRPYGARQL
LLLNNTLYVGAVADPAQIWVVDATTLKLKTRIKNTGKWMTGLHYSAQTGRVYAANGSGEILVINPRNQRIEQRWKPLGDK
PALLLNMAEDSDTGRLFVTDNSKAKTTLVLDIHSGKLLKQLDVGDSLAVQFNKKRHEIYISQRESGKVISLDASRYTLKK
SWALPANPNSLLLSADGQTLFVTVKQPFNKDHSTKGPDSVVRIDLNAQ
>Mature_368_residues
MIFYRVDPMKYTLPALTLAISAALSGCATPHSSAVSQPVVDSPVPNVAQPLQRQLAEGLYEMALSPQGDALYVASAEGFK
NVQGGAVYTLDPHTLNTIGLTHTDLKNFALQLSAEGKTLYVSNSLDGGISAIDTATGKVKNRLLFSERNEKGRPYGARQL
LLLNNTLYVGAVADPAQIWVVDATTLKLKTRIKNTGKWMTGLHYSAQTGRVYAANGSGEILVINPRNQRIEQRWKPLGDK
PALLLNMAEDSDTGRLFVTDNSKAKTTLVLDIHSGKLLKQLDVGDSLAVQFNKKRHEIYISQRESGKVISLDASRYTLKK
SWALPANPNSLLLSADGQTLFVTVKQPFNKDHSTKGPDSVVRIDLNAQ

Specific function: Unknown

COG id: COG3391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787724, Length=322, Percent_Identity=40.3726708074534, Blast_Score=236, Evalue=2e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011048
- InterPro:   IPR015943 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40055; Mature: 40055

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFYRVDPMKYTLPALTLAISAALSGCATPHSSAVSQPVVDSPVPNVAQPLQRQLAEGLY
CEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHH
EMALSPQGDALYVASAEGFKNVQGGAVYTLDPHTLNTIGLTHTDLKNFALQLSAEGKTLY
HHHCCCCCCEEEEEECCCCCCCCCCEEEEECCCCEEEEECCCCCCCCEEEEEECCCCEEE
VSNSLDGGISAIDTATGKVKNRLLFSERNEKGRPYGARQLLLLNNTLYVGAVADPAQIWV
EECCCCCCCEEEECCCHHHHHEEEEECCCCCCCCCCCEEEEEEECEEEEEEECCCEEEEE
VDATTLKLKTRIKNTGKWMTGLHYSAQTGRVYAANGSGEILVINPRNQRIEQRWKPLGDK
EEEEEEEEEEEECCCCCEEEEEEEECCCCEEEEECCCCEEEEECCCCHHHHHHCCCCCCC
PALLLNMAEDSDTGRLFVTDNSKAKTTLVLDIHSGKLLKQLDVGDSLAVQFNKKRHEIYI
CEEEEEECCCCCCCEEEEECCCCCEEEEEEEECCCCEEEEECCCCEEEEEECCCEEEEEE
SQRESGKVISLDASRYTLKKSWALPANPNSLLLSADGQTLFVTVKQPFNKDHSTKGPDSV
EECCCCCEEEEECCEEEEEECCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCCE
VRIDLNAQ
EEEEECCC
>Mature Secondary Structure
MIFYRVDPMKYTLPALTLAISAALSGCATPHSSAVSQPVVDSPVPNVAQPLQRQLAEGLY
CEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHH
EMALSPQGDALYVASAEGFKNVQGGAVYTLDPHTLNTIGLTHTDLKNFALQLSAEGKTLY
HHHCCCCCCEEEEEECCCCCCCCCCEEEEECCCCEEEEECCCCCCCCEEEEEECCCCEEE
VSNSLDGGISAIDTATGKVKNRLLFSERNEKGRPYGARQLLLLNNTLYVGAVADPAQIWV
EECCCCCCCEEEECCCHHHHHEEEEECCCCCCCCCCCEEEEEEECEEEEEEECCCEEEEE
VDATTLKLKTRIKNTGKWMTGLHYSAQTGRVYAANGSGEILVINPRNQRIEQRWKPLGDK
EEEEEEEEEEEECCCCCEEEEEEEECCCCEEEEECCCCEEEEECCCCHHHHHHCCCCCCC
PALLLNMAEDSDTGRLFVTDNSKAKTTLVLDIHSGKLLKQLDVGDSLAVQFNKKRHEIYI
CEEEEEECCCCCCCEEEEECCCCCEEEEEEEECCCCEEEEECCCCEEEEEECCCEEEEEE
SQRESGKVISLDASRYTLKKSWALPANPNSLLLSADGQTLFVTVKQPFNKDHSTKGPDSV
EECCCCCEEEEECCEEEEEECCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCCE
VRIDLNAQ
EEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]