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The map label for this gene is ybaP [H]

Identifier: 238893451

GI number: 238893451

Start: 1295133

End: 1295927

Strand: Reverse

Name: ybaP [H]

Synonym: KP1_1342

Alternate gene names: 238893451

Gene position: 1295927-1295133 (Counterclockwise)

Preceding gene: 238893452

Following gene: 238893450

Centisome position: 24.69

GC content: 63.52

Gene sequence:

>795_bases
ATGGGCCTGTTAAACCGGATAAAAATGCTGTGGCGAGCCGCCGCCGGCTCGTCTTATTCCTGGCCTGCGATGGATATCGT
CCTGCCCGGCGAACGCTATTTGCACCTCGTCGGCAGTATCCATATGGGCACCCGCGACATGGCGCCGCCGCCGGCGAAGC
TTCTGAAAAAAATACGCCAGGCCGATGCGTTAATCGTCGAGGCCGATATCAGCGGCAATGAAACCCCGTTTAGCAATCTC
CCCACTTACCCACCGCTGGCGGAACGCCTGAGCGATGCGCAGCTGAGCGAGCTAGAGGCGCGAGCCGGCGAGCTGGGCCT
GTCGGTCGGGCTGTTCGACAGCCAGCCGCTGTGGCAGGTGGCGATGGTCCTGCAGGCCACCCAGGCGCAGAAGCTGGGGC
TGCGACCGGATTACGGCATCGATTATCAGTTGCTGATGGCCGCCCGCGAGAGCAACATAGCGGTGATGGAGCTGGAAGGC
GCCGACAGCCAAATCGCGCTGCTGCGCGATCTGCCCGACGGGGGGATGGCGCTGCTGGAGGATACGCTGACCCACTGGCG
CACCAACGCCCGTTTACTGCAGGTCATGATCGGCTGGTGGCTGGAGCAACCGCCGTCGCGCGGCGCGGTATCGCTGCCGA
CGACCTTTAGCCAGTCTTTATATGATGTGCTGATGCACCAGCGCAACCTCGCCTGGCGCGAGACGCTGCTGGCCTTGCCG
CCGGGGCGCTACGTGGTTGCCGTCGGCGCGCTGCACCTGTATGGCGAAGGGAATCTGCCGGATATGCTGACATAA

Upstream 100 bases:

>100_bases
GTTCGGCGCCCTTTTTTTGCCGGGACAAGAAAAGCCCGCCGGAAGGGTGACGTGTATCACCATATGCGCTAGCATGAAGT
CCTCACACTTCGGAGCGCGT

Downstream 100 bases:

>100_bases
AAAAAATGGCCAATATTGCTATTGGCCCGTCAAAGAGGAATTTCATCATTATTATTATCCCGGGATTTGCATCCCGGATC
GTCTGATTGTCGCTCAAAGT

Product: putative ligase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MGLLNRIKMLWRAAAGSSYSWPAMDIVLPGERYLHLVGSIHMGTRDMAPPPAKLLKKIRQADALIVEADISGNETPFSNL
PTYPPLAERLSDAQLSELEARAGELGLSVGLFDSQPLWQVAMVLQATQAQKLGLRPDYGIDYQLLMAARESNIAVMELEG
ADSQIALLRDLPDGGMALLEDTLTHWRTNARLLQVMIGWWLEQPPSRGAVSLPTTFSQSLYDVLMHQRNLAWRETLLALP
PGRYVVAVGALHLYGEGNLPDMLT

Sequences:

>Translated_264_residues
MGLLNRIKMLWRAAAGSSYSWPAMDIVLPGERYLHLVGSIHMGTRDMAPPPAKLLKKIRQADALIVEADISGNETPFSNL
PTYPPLAERLSDAQLSELEARAGELGLSVGLFDSQPLWQVAMVLQATQAQKLGLRPDYGIDYQLLMAARESNIAVMELEG
ADSQIALLRDLPDGGMALLEDTLTHWRTNARLLQVMIGWWLEQPPSRGAVSLPTTFSQSLYDVLMHQRNLAWRETLLALP
PGRYVVAVGALHLYGEGNLPDMLT
>Mature_263_residues
GLLNRIKMLWRAAAGSSYSWPAMDIVLPGERYLHLVGSIHMGTRDMAPPPAKLLKKIRQADALIVEADISGNETPFSNLP
TYPPLAERLSDAQLSELEARAGELGLSVGLFDSQPLWQVAMVLQATQAQKLGLRPDYGIDYQLLMAARESNIAVMELEGA
DSQIALLRDLPDGGMALLEDTLTHWRTNARLLQVMIGWWLEQPPSRGAVSLPTTFSQSLYDVLMHQRNLAWRETLLALPP
GRYVVAVGALHLYGEGNLPDMLT

Specific function: Unknown

COG id: COG3735

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786689, Length=263, Percent_Identity=66.9201520912547, Blast_Score=373, Evalue=1e-105,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010891 [H]

Pfam domain/function: PF07446 GumN [H]

EC number: NA

Molecular weight: Translated: 29136; Mature: 29005

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLLNRIKMLWRAAAGSSYSWPAMDIVLPGERYLHLVGSIHMGTRDMAPPPAKLLKKIRQ
CCHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
ADALIVEADISGNETPFSNLPTYPPLAERLSDAQLSELEARAGELGLSVGLFDSQPLWQV
HCEEEEEECCCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHCCEEEECCCCCHHHHH
AMVLQATQAQKLGLRPDYGIDYQLLMAARESNIAVMELEGADSQIALLRDLPDGGMALLE
HHHHHHHHHHHCCCCCCCCCCHHHEEEECCCCEEEEEECCCCCEEEEEEECCCCCHHHHH
DTLTHWRTNARLLQVMIGWWLEQPPSRGAVSLPTTFSQSLYDVLMHQRNLAWRETLLALP
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHHHHHHHCCHHHHHHHHCCC
PGRYVVAVGALHLYGEGNLPDMLT
CCCEEEEEEEEEEECCCCCCCCCC
>Mature Secondary Structure 
GLLNRIKMLWRAAAGSSYSWPAMDIVLPGERYLHLVGSIHMGTRDMAPPPAKLLKKIRQ
CHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
ADALIVEADISGNETPFSNLPTYPPLAERLSDAQLSELEARAGELGLSVGLFDSQPLWQV
HCEEEEEECCCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHCCEEEECCCCCHHHHH
AMVLQATQAQKLGLRPDYGIDYQLLMAARESNIAVMELEGADSQIALLRDLPDGGMALLE
HHHHHHHHHHHCCCCCCCCCCHHHEEEECCCCEEEEEECCCCCEEEEEEECCCCCHHHHH
DTLTHWRTNARLLQVMIGWWLEQPPSRGAVSLPTTFSQSLYDVLMHQRNLAWRETLLALP
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHHHHHHHCCHHHHHHHHCCC
PGRYVVAVGALHLYGEGNLPDMLT
CCCEEEEEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]