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The map label for this gene is ybaX [H]

Identifier: 238893393

GI number: 238893393

Start: 1233373

End: 1234074

Strand: Reverse

Name: ybaX [H]

Synonym: KP1_1277

Alternate gene names: 238893393

Gene position: 1234074-1233373 (Counterclockwise)

Preceding gene: 238893394

Following gene: 238893384

Centisome position: 23.51

GC content: 57.98

Gene sequence:

>702_bases
ATGAAACGCGCCGTAGTTGTCTTCAGCGGAGGACAAGATTCAACCACCTGTCTGGTGCAGGCTCTGCAACAGTATGATGA
AGTGCATTGCGTCACTTTTGATTATGGCCAACGCCACCGCGCGGAAATCGACGTTGCGCGCGAACTCGCCCTGAAACTGG
GCGCCGTCGCGCATAAAGTGCTGGACGTCACTCTGCTCAACGAACTGGCAGTCAGCAGCCTGACCCGCGATAACATTCCG
GTACCGGACTATCAGCCTGATGCCGAGGGTATTCCCAACACCTTTGTCCCCGGGCGTAATATTCTGTTTTTAACCCTGAC
GGCAATCTACGCCTATCAGGTAAAAGCCGAAGCCATCATCACCGGCGTGTGCGAGACCGACTTCTCCGGCTACCCGGACT
GCCGCGATGAGTTTGTCAAAGCGCTGCACCACGCCGTCAGCCTGGGGATGGCGAAAGACATTCGCTTTGAGACGCCGCTG
ATGTGGCTGAATAAAGCCGAGACCTGGGCGCTCGCCGACTACTGGGGTCAGCTGGATCTGGTGCGCCGGGAAACCCTCAC
CTGCTACAACGGCATTAAGGGCGATGGCTGCGGCCAGTGCGCCGCCTGTAACCTGCGCGCAAACGGACGCAACCAGTATC
TGGCGGACAAGGTCGGGGTAATGGCGGTTATGCAGCAAAAAACCGGACTGGCGCAGGCATAA

Upstream 100 bases:

>100_bases
CGCCAGCGCCTGGCTGCCGGCCTCGTCGACGTGAGAGAGCTGGTGATGGAGGGCGTCTGGCGCTACCATATCGCCTTTAT
TCATTTAGTCAGGAATTGCC

Downstream 100 bases:

>100_bases
TCTCCGGGGATCGATTTACCGGAGCTTTGACTCAAATTCCCCGGTGGCGCGATGCTTACCGGGGCTACGGGTTCATCACC
TGCCGTGGGCCCGCCACTCG

Product: queuosine biosynthesis protein QueC

Products: NA

Alternate protein names: 7-cyano-7-carbaguanine synthase; PreQ(0) synthase; Queuosine biosynthesis protein queC [H]

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MKRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGAVAHKVLDVTLLNELAVSSLTRDNIP
VPDYQPDAEGIPNTFVPGRNILFLTLTAIYAYQVKAEAIITGVCETDFSGYPDCRDEFVKALHHAVSLGMAKDIRFETPL
MWLNKAETWALADYWGQLDLVRRETLTCYNGIKGDGCGQCAACNLRANGRNQYLADKVGVMAVMQQKTGLAQA

Sequences:

>Translated_233_residues
MKRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGAVAHKVLDVTLLNELAVSSLTRDNIP
VPDYQPDAEGIPNTFVPGRNILFLTLTAIYAYQVKAEAIITGVCETDFSGYPDCRDEFVKALHHAVSLGMAKDIRFETPL
MWLNKAETWALADYWGQLDLVRRETLTCYNGIKGDGCGQCAACNLRANGRNQYLADKVGVMAVMQQKTGLAQA
>Mature_233_residues
MKRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGAVAHKVLDVTLLNELAVSSLTRDNIP
VPDYQPDAEGIPNTFVPGRNILFLTLTAIYAYQVKAEAIITGVCETDFSGYPDCRDEFVKALHHAVSLGMAKDIRFETPL
MWLNKAETWALADYWGQLDLVRRETLTCYNGIKGDGCGQCAACNLRANGRNQYLADKVGVMAVMQQKTGLAQA

Specific function: Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) [H]

COG id: COG0603

COG function: function code R; Predicted PP-loop superfamily ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the queC family [H]

Homologues:

Organism=Escherichia coli, GI1786648, Length=230, Percent_Identity=90.8695652173913, Blast_Score=441, Evalue=1e-125,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001518
- InterPro:   IPR018317
- InterPro:   IPR014729 [H]

Pfam domain/function: PF06508 ExsB [H]

EC number: NA

Molecular weight: Translated: 25706; Mature: 25706

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGAVAHKV
CCEEEEEEECCCCHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
LDVTLLNELAVSSLTRDNIPVPDYQPDAEGIPNTFVPGRNILFLTLTAIYAYQVKAEAII
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEHHHHE
TGVCETDFSGYPDCRDEFVKALHHAVSLGMAKDIRFETPLMWLNKAETWALADYWGQLDL
EEECCCCCCCCCCHHHHHHHHHHHHHHHCCHHCCCCCCCCCEECCCCCEEHHHHHCCHHH
VRRETLTCYNGIKGDGCGQCAACNLRANGRNQYLADKVGVMAVMQQKTGLAQA
HHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGAVAHKV
CCEEEEEEECCCCHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
LDVTLLNELAVSSLTRDNIPVPDYQPDAEGIPNTFVPGRNILFLTLTAIYAYQVKAEAII
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEHHHHE
TGVCETDFSGYPDCRDEFVKALHHAVSLGMAKDIRFETPLMWLNKAETWALADYWGQLDL
EEECCCCCCCCCCHHHHHHHHHHHHHHHCCHHCCCCCCCCCEECCCCCEEHHHHHCCHHH
VRRETLTCYNGIKGDGCGQCAACNLRANGRNQYLADKVGVMAVMQQKTGLAQA
HHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA