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The map label for this gene is yafS [H]

Identifier: 238893206

GI number: 238893206

Start: 1048622

End: 1049350

Strand: Direct

Name: yafS [H]

Synonym: KP1_1072

Alternate gene names: 238893206

Gene position: 1048622-1049350 (Clockwise)

Preceding gene: 238893203

Following gene: 238893208

Centisome position: 19.98

GC content: 57.2

Gene sequence:

>729_bases
GTGGCAATGAAGCCGGCAAGGATACCTCACACAGTGACAGCGCCTGAGCATTGGTCCAGTATGCCGTGGGGCGAATACTA
TCGCGAAACGCTGGAGCAGCAGATGAAACCGTGGCTGGCTAAATTATATGGCTTTCATCTGCTTAAGATTGGCAATCTGA
GCGCGGAAATCAATACCGAAGCTTGCGCCATCTCGCACCAGGTGAATGTCTCGCTGGCGGGAAATCCAATGCAGGTCCGG
GCTGACCCGCTGCATTTACCCTTTGCCGAAAAGTCCGTTGACGCCTGCCTGCTGGCGCACACCCTGCCGTGGTGTAGCGA
TCCGCATCGTCTGCTGCGGGAAGCCGATCGTGTACTGATCGATGATGGCTGGATGATCCTGACCGGGTTTAATCCGGTCA
GCCTGATGGGGTTGCGTAAGCTGGTGCCGGTCCTGCGCAAAGGAACGCCTTATAATAGCCGTATGTTTACGCTGATGCGC
CAGCTGGACTGGCTGGCGCTGCTCAACTTTGAAGTGCTGCACTATGGACGTTACCAGGTTTTGCCCTGGTCGCGCCATGG
CGGCAAATTGTTGAGCACCCATCTGCCGGCGCTGGGCTGTTTGCAATTGATTGTCGCCCGCAAACGGACCATTCCGCTGA
CGCTCAATCCGATGAAATCCGGCAAAGCGAAAACTCAGCTGCGGCCGGCGGTGGGCGCCACCCGGCAGTGGCGCAAAGGG
CAGAATTAA

Upstream 100 bases:

>100_bases
ATGCAGCGGCCGTTATTCTCACTGAGAACCCAGATGTAGTTGTCCTGAAACGCGGGAATACTGATAAGATTCATAAATTA
CCTCTAAAGCGTAGCGGAAG

Downstream 100 bases:

>100_bases
CTCTCAGGCAGGTAGCCGACATCGTCCAGTGTGGGGTGGGAGGCCGCCGCGCGCGCCAACTCGTCGCAGCGTTCATTTTC
AGGATGGCCGGCGTGGCCCT

Product: putative methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MAMKPARIPHTVTAPEHWSSMPWGEYYRETLEQQMKPWLAKLYGFHLLKIGNLSAEINTEACAISHQVNVSLAGNPMQVR
ADPLHLPFAEKSVDACLLAHTLPWCSDPHRLLREADRVLIDDGWMILTGFNPVSLMGLRKLVPVLRKGTPYNSRMFTLMR
QLDWLALLNFEVLHYGRYQVLPWSRHGGKLLSTHLPALGCLQLIVARKRTIPLTLNPMKSGKAKTQLRPAVGATRQWRKG
QN

Sequences:

>Translated_242_residues
MAMKPARIPHTVTAPEHWSSMPWGEYYRETLEQQMKPWLAKLYGFHLLKIGNLSAEINTEACAISHQVNVSLAGNPMQVR
ADPLHLPFAEKSVDACLLAHTLPWCSDPHRLLREADRVLIDDGWMILTGFNPVSLMGLRKLVPVLRKGTPYNSRMFTLMR
QLDWLALLNFEVLHYGRYQVLPWSRHGGKLLSTHLPALGCLQLIVARKRTIPLTLNPMKSGKAKTQLRPAVGATRQWRKG
QN
>Mature_241_residues
AMKPARIPHTVTAPEHWSSMPWGEYYRETLEQQMKPWLAKLYGFHLLKIGNLSAEINTEACAISHQVNVSLAGNPMQVRA
DPLHLPFAEKSVDACLLAHTLPWCSDPHRLLREADRVLIDDGWMILTGFNPVSLMGLRKLVPVLRKGTPYNSRMFTLMRQ
LDWLALLNFEVLHYGRYQVLPWSRHGGKLLSTHLPALGCLQLIVARKRTIPLTLNPMKSGKAKTQLRPAVGATRQWRKGQ
N

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081700, Length=239, Percent_Identity=76.9874476987448, Blast_Score=400, Evalue=1e-113,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 27498; Mature: 27367

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMKPARIPHTVTAPEHWSSMPWGEYYRETLEQQMKPWLAKLYGFHLLKIGNLSAEINTE
CCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCC
ACAISHQVNVSLAGNPMQVRADPLHLPFAEKSVDACLLAHTLPWCSDPHRLLREADRVLI
EEEEEEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCEEEE
DDGWMILTGFNPVSLMGLRKLVPVLRKGTPYNSRMFTLMRQLDWLALLNFEVLHYGRYQV
ECCEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEE
LPWSRHGGKLLSTHLPALGCLQLIVARKRTIPLTLNPMKSGKAKTQLRPAVGATRQWRKG
EEECCCCCCHHHHHCCHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHCHHHCCCHHHCCC
QN
CC
>Mature Secondary Structure 
AMKPARIPHTVTAPEHWSSMPWGEYYRETLEQQMKPWLAKLYGFHLLKIGNLSAEINTE
CCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCC
ACAISHQVNVSLAGNPMQVRADPLHLPFAEKSVDACLLAHTLPWCSDPHRLLREADRVLI
EEEEEEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCEEEE
DDGWMILTGFNPVSLMGLRKLVPVLRKGTPYNSRMFTLMRQLDWLALLNFEVLHYGRYQV
ECCEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEE
LPWSRHGGKLLSTHLPALGCLQLIVARKRTIPLTLNPMKSGKAKTQLRPAVGATRQWRKG
EEECCCCCCHHHHHCCHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHCHHHCCCHHHCCC
QN
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]