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The map label for this gene is yadT [H]

Identifier: 238893156

GI number: 238893156

Start: 991093

End: 991893

Strand: Reverse

Name: yadT [H]

Synonym: KP1_1011

Alternate gene names: 238893156

Gene position: 991893-991093 (Counterclockwise)

Preceding gene: 238893157

Following gene: 238893155

Centisome position: 18.9

GC content: 62.3

Gene sequence:

>801_bases
GTGGCTAAGTCGCTATCCTTCGCGCTTGCCGCGCTGCTGTTACTCGCCCCGGCGTGGCTGCTGGCCGCGCCGCGGGTGAT
CACCCTCTCCCCCGCCAATACCGAACTGGCCTTTGCCGCCGGGATCACGCCGGTCGGCGTCAGCAGCTATTCCGATTATC
CTTCGCAGGCCAAAACGATCGAACAGGTTGCCAGCTGGCAGGGAATGAACCTGGAACGCATCGTGGCGCTCAAGCCAGAC
GTGGTGCTGGCCTGGCGCGGGGGCAATGCCGAACGCCAGGTTAACCAGCTGCAGTCTCTGGGTATTCACGTCCTGTGGGT
ACAGACCTCGACCATAGAAGAGATCATCGCTACCCTGCGTGAGCTGGCGCAGTGGAGCCCGCAGCCGGAAAAAGCACAGC
AGGCGGCGCAGGCGATGCAGCAGGAATACGATGCGTTGAAAGCGCGCTATGCCAACGCGCCGAAGAAACGCGTCTTCCTG
CAGTTCGGCTCCGCACCGCTGTTCACCAGCGGCCCCGGTTCGATTCAGGATCAGGTGCTAAGGCTTTGCGGCGGCGAGAA
TATCTTCGCCACCAGCCGCGTTCCCTGGCCGCAGGTGAGCCGCGAACAGGTGCTGGCCCGCCAGCCGCAGGCGATCGTGG
TCACCGGGGATGCCAGCCGCATTGCCGAAGCGCAGCGCTTTTGGCAACATCAGCTCACCATTTCGTTGATTGCGTTACAC
AGCGACTGGTTTGAACGCGCCGGCCCACGTATTATCCTCGCCGCCAAACAACTTTGTGCGGCGCTTGACCAGGTAAAATA
A

Upstream 100 bases:

>100_bases
GTGGCCGACCAGCAGTCCCACCTCAGCTTTGAGGAGTTCCTTGCGGTCGCCGCCAGACAGTCCACCCTGATGGTGGAGAA
TCTGGTACAGAACCTGGCAC

Downstream 100 bases:

>100_bases
TCATCCGGCACACCGGATGTTCAGTGGGAATCAACGATGCTTGTCTATTGGCTGGATATTATTGGCACAGCTGTCTTCGC
GATCTCCGGCGTACTGCTGG

Product: vitamin B12-transporter protein BtuF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MAKSLSFALAALLLLAPAWLLAAPRVITLSPANTELAFAAGITPVGVSSYSDYPSQAKTIEQVASWQGMNLERIVALKPD
VVLAWRGGNAERQVNQLQSLGIHVLWVQTSTIEEIIATLRELAQWSPQPEKAQQAAQAMQQEYDALKARYANAPKKRVFL
QFGSAPLFTSGPGSIQDQVLRLCGGENIFATSRVPWPQVSREQVLARQPQAIVVTGDASRIAEAQRFWQHQLTISLIALH
SDWFERAGPRIILAAKQLCAALDQVK

Sequences:

>Translated_266_residues
MAKSLSFALAALLLLAPAWLLAAPRVITLSPANTELAFAAGITPVGVSSYSDYPSQAKTIEQVASWQGMNLERIVALKPD
VVLAWRGGNAERQVNQLQSLGIHVLWVQTSTIEEIIATLRELAQWSPQPEKAQQAAQAMQQEYDALKARYANAPKKRVFL
QFGSAPLFTSGPGSIQDQVLRLCGGENIFATSRVPWPQVSREQVLARQPQAIVVTGDASRIAEAQRFWQHQLTISLIALH
SDWFERAGPRIILAAKQLCAALDQVK
>Mature_265_residues
AKSLSFALAALLLLAPAWLLAAPRVITLSPANTELAFAAGITPVGVSSYSDYPSQAKTIEQVASWQGMNLERIVALKPDV
VLAWRGGNAERQVNQLQSLGIHVLWVQTSTIEEIIATLRELAQWSPQPEKAQQAAQAMQQEYDALKARYANAPKKRVFLQ
FGSAPLFTSGPGSIQDQVLRLCGGENIFATSRVPWPQVSREQVLARQPQAIVVTGDASRIAEAQRFWQHQLTISLIALHS
DWFERAGPRIILAAKQLCAALDQVK

Specific function: Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Binds vitamin B12 and delivers it to the periplasmic surface of BtuC [H]

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786353, Length=265, Percent_Identity=72.4528301886792, Blast_Score=386, Evalue=1e-109,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 29144; Mature: 29013

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKSLSFALAALLLLAPAWLLAAPRVITLSPANTELAFAAGITPVGVSSYSDYPSQAKTI
CCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCHHHHHH
EQVASWQGMNLERIVALKPDVVLAWRGGNAERQVNQLQSLGIHVLWVQTSTIEEIIATLR
HHHHHCCCCCHHEEEEECCCEEEEECCCCHHHHHHHHHHCCEEEEEEEHHHHHHHHHHHH
ELAQWSPQPEKAQQAAQAMQQEYDALKARYANAPKKRVFLQFGSAPLFTSGPGSIQDQVL
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHH
RLCGGENIFATSRVPWPQVSREQVLARQPQAIVVTGDASRIAEAQRFWQHQLTISLIALH
HHHCCCCEEECCCCCCCCCCHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
SDWFERAGPRIILAAKQLCAALDQVK
HHHHHHCCCEEEEHHHHHHHHHHCCC
>Mature Secondary Structure 
AKSLSFALAALLLLAPAWLLAAPRVITLSPANTELAFAAGITPVGVSSYSDYPSQAKTI
CCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCHHHHHH
EQVASWQGMNLERIVALKPDVVLAWRGGNAERQVNQLQSLGIHVLWVQTSTIEEIIATLR
HHHHHCCCCCHHEEEEECCCEEEEECCCCHHHHHHHHHHCCEEEEEEEHHHHHHHHHHHH
ELAQWSPQPEKAQQAAQAMQQEYDALKARYANAPKKRVFLQFGSAPLFTSGPGSIQDQVL
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHH
RLCGGENIFATSRVPWPQVSREQVLARQPQAIVVTGDASRIAEAQRFWQHQLTISLIALH
HHHCCCCEEECCCCCCCCCCHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
SDWFERAGPRIILAAKQLCAALDQVK
HHHHHHCCCEEEEHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA