Click here to switch to the map view.

The map label for this gene is yadS [H]

Identifier: 238893155

GI number: 238893155

Start: 990433

End: 991056

Strand: Reverse

Name: yadS [H]

Synonym: KP1_1010

Alternate gene names: 238893155

Gene position: 991056-990433 (Counterclockwise)

Preceding gene: 238893156

Following gene: 238893152

Centisome position: 18.88

GC content: 60.1

Gene sequence:

>624_bases
ATGCTTGTCTATTGGCTGGATATTATTGGCACAGCTGTCTTCGCGATCTCCGGCGTACTGCTGGCCGGAAAACTGCGTAT
GGACCCATTCGGCGTGCTGGTGTTAGGGGTAGTGACGGCGGTAGGCGGCGGGACCATCCGCGACATGGCGCTGGCGAATG
GCCCGGTATTCTGGGTCAAAGATCCCACCGATCTGGTGGTGGCGATGGTCACCAGCATGCTGACCATCCTGCTGGTCCGC
CAGCCTCGCCGGCTGCCGAAATGGATCCTGCCCGTTCTTGATGCCGTCGGTCTGGCGGTGTTTGTCGGCATTGGCGTCAA
TAAAGCTTTTCTCGCTGGCAGCGGCCCGCTGGTCGCGGTGTGCATGGGGGTGGTGACCGGCGTCGGCGGCGGGATTATTC
GCGACGTGCTGGCGCGGGAAATTCCTATGATTCTGCGTACCGAAATCTACGCCACCGCCTGTATCGTCGGCGGTATTGTC
CACGCCACGGCACACGACACCTTTCATCTCCCACTGGAGAATTCGGCAATGATGGGGATGGTGGTCACCCTGGTAATTCG
TCTGGCGGCTATTCGCTGGCATCTGAAGCTGCCGACGTTTGCCCTGGACGATAACGGTCGGTAA

Upstream 100 bases:

>100_bases
CGCCGGCCCACGTATTATCCTCGCCGCCAAACAACTTTGTGCGGCGCTTGACCAGGTAAAATAATCATCCGGCACACCGG
ATGTTCAGTGGGAATCAACG

Downstream 100 bases:

>100_bases
TAAAAGCAAAACGGTAACCTTAAGGTTACCGTTTTTAGGGTTTGCTCCCTCCCGCTGGGGGAGAACTCGCTTTAAACGCT
GAACGAGGAGCCGCAGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MLVYWLDIIGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGGTIRDMALANGPVFWVKDPTDLVVAMVTSMLTILLVR
QPRRLPKWILPVLDAVGLAVFVGIGVNKAFLAGSGPLVAVCMGVVTGVGGGIIRDVLAREIPMILRTEIYATACIVGGIV
HATAHDTFHLPLENSAMMGMVVTLVIRLAAIRWHLKLPTFALDDNGR

Sequences:

>Translated_207_residues
MLVYWLDIIGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGGTIRDMALANGPVFWVKDPTDLVVAMVTSMLTILLVR
QPRRLPKWILPVLDAVGLAVFVGIGVNKAFLAGSGPLVAVCMGVVTGVGGGIIRDVLAREIPMILRTEIYATACIVGGIV
HATAHDTFHLPLENSAMMGMVVTLVIRLAAIRWHLKLPTFALDDNGR
>Mature_207_residues
MLVYWLDIIGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGGTIRDMALANGPVFWVKDPTDLVVAMVTSMLTILLVR
QPRRLPKWILPVLDAVGLAVFVGIGVNKAFLAGSGPLVAVCMGVVTGVGGGIIRDVLAREIPMILRTEIYATACIVGGIV
HATAHDTFHLPLENSAMMGMVVTLVIRLAAIRWHLKLPTFALDDNGR

Specific function: Unknown

COG id: COG2860

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0126 family [H]

Homologues:

Organism=Escherichia coli, GI1786352, Length=207, Percent_Identity=90.3381642512077, Blast_Score=349, Evalue=9e-98,
Organism=Escherichia coli, GI87082304, Length=161, Percent_Identity=38.5093167701863, Blast_Score=115, Evalue=3e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005115 [H]

Pfam domain/function: PF03458 UPF0126 [H]

EC number: NA

Molecular weight: Translated: 21947; Mature: 21947

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVYWLDIIGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGGTIRDMALANGPVFWVK
CEEEHHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEE
DPTDLVVAMVTSMLTILLVRQPRRLPKWILPVLDAVGLAVFVGIGVNKAFLAGSGPLVAV
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHH
CMGVVTGVGGGIIRDVLAREIPMILRTEIYATACIVGGIVHATAHDTFHLPLENSAMMGM
HHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHH
VVTLVIRLAAIRWHLKLPTFALDDNGR
HHHHHHHHHHHHHEEECCEEEECCCCC
>Mature Secondary Structure
MLVYWLDIIGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGGTIRDMALANGPVFWVK
CEEEHHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEE
DPTDLVVAMVTSMLTILLVRQPRRLPKWILPVLDAVGLAVFVGIGVNKAFLAGSGPLVAV
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHH
CMGVVTGVGGGIIRDVLAREIPMILRTEIYATACIVGGIVHATAHDTFHLPLENSAMMGM
HHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHH
VVTLVIRLAAIRWHLKLPTFALDDNGR
HHHHHHHHHHHHHEEECCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]