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The map label for this gene is yijD [H]

Identifier: 238892361

GI number: 238892361

Start: 115513

End: 115872

Strand: Direct

Name: yijD [H]

Synonym: KP1_0118

Alternate gene names: 238892361

Gene position: 115513-115872 (Clockwise)

Preceding gene: 238892360

Following gene: 238892363

Centisome position: 2.2

GC content: 54.72

Gene sequence:

>360_bases
ATGAAACACTCAGTTCAAGATAAAGGTACGCTGCTGCTGGCGCTGATTGCCGGGTTATCCATTAATGGCGCCTTTGCGGC
GCTGTTCAGTTCGATAGTTCCGTTTTCCGTCTTCCCCATTTTATCCCTGCTGCTGACGGTCTACTGTCTGCATCAGCGCT
ATCAGAATCGCAGTATGCCCGTTGGGCTACCGGGCCTGGCCGCCGCCTTTTTTATTCTCGGGGTGCTGTTGTACAGCACC
GTCGTGCGTGCGGAGTACCCGGATATCGGTTCTAACTTCTTCCCGGCCGTTCTGTCCGTCGCGATGGTCTTCTGGATCGG
CTACAAGATGCGTAACCGCAAAGATACCGCAGCCGAGTAA

Upstream 100 bases:

>100_bases
GGTACTGCAGCTTCGAATGATCTCGAAAGGCGCGTATTACTGGTATCGCCGTGAACAAGAAAAAATGTCACATCATTCCG
AATAACGTGAAGGACGAGCA

Downstream 100 bases:

>100_bases
GCCGCCAGCGGTAAAAAAACCGGCAATATGACGTTGCCGGTTTTTTTGGGCCTATTTGCGGGTCAGCAGGACGCCGCACT
CCATGTGATGGGTATACGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MKHSVQDKGTLLLALIAGLSINGAFAALFSSIVPFSVFPILSLLLTVYCLHQRYQNRSMPVGLPGLAAAFFILGVLLYST
VVRAEYPDIGSNFFPAVLSVAMVFWIGYKMRNRKDTAAE

Sequences:

>Translated_119_residues
MKHSVQDKGTLLLALIAGLSINGAFAALFSSIVPFSVFPILSLLLTVYCLHQRYQNRSMPVGLPGLAAAFFILGVLLYST
VVRAEYPDIGSNFFPAVLSVAMVFWIGYKMRNRKDTAAE
>Mature_119_residues
MKHSVQDKGTLLLALIAGLSINGAFAALFSSIVPFSVFPILSLLLTVYCLHQRYQNRSMPVGLPGLAAAFFILGVLLYST
VVRAEYPDIGSNFFPAVLSVAMVFWIGYKMRNRKDTAAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790402, Length=119, Percent_Identity=86.5546218487395, Blast_Score=211, Evalue=1e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009867
- ProDom:   PD076479 [H]

Pfam domain/function: PF07226 DUF1422 [H]

EC number: NA

Molecular weight: Translated: 13030; Mature: 13030

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHSVQDKGTLLLALIAGLSINGAFAALFSSIVPFSVFPILSLLLTVYCLHQRYQNRSMP
CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
VGLPGLAAAFFILGVLLYSTVVRAEYPDIGSNFFPAVLSVAMVFWIGYKMRNRKDTAAE
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKHSVQDKGTLLLALIAGLSINGAFAALFSSIVPFSVFPILSLLLTVYCLHQRYQNRSMP
CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
VGLPGLAAAFFILGVLLYSTVVRAEYPDIGSNFFPAVLSVAMVFWIGYKMRNRKDTAAE
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]