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The map label for this gene is rhaT [H]

Identifier: 238892324

GI number: 238892324

Start: 74040

End: 75074

Strand: Reverse

Name: rhaT [H]

Synonym: KP1_0075

Alternate gene names: 238892324

Gene position: 75074-74040 (Counterclockwise)

Preceding gene: 238892327

Following gene: 238892321

Centisome position: 1.43

GC content: 57.39

Gene sequence:

>1035_bases
ATGAACCACGCGATTACGATGGGTATTTTTTGGCATTTGATAGGGGCCGCCAGTGCCGCCTGTTTCTATGCCCCGTTCAA
GAAAGTAAAACACTGGTCGTGGGAAACCATGTGGTCGGTCGGGGGGATCGTCTCCTGGCTGATTCTGCCCTGGGCCATCA
GCGCCACGCTGTTACCCGACTTCTGGGCCTACTACCGCTCTTTTAGCGCCTCCACGCTGCTGCCGGTCTTTCTGTTCGGC
GCCATGTGGGGCATTGGTAATATCAACTATGGCCTGACCATGCGCTATCTTGGCATGTCGATGGGGATTGGCATCGCCAT
TGGCATCACGCTGATTGTCGGCACGCTGATGACGCCGATTATTAACGGTCAGTTTGCAGTGCTGATGCACACCCAGGGCG
GTCAAATGACGCTGCTCGGCGTGCTGGTGGCGGTGATTGGCGTCGGCATCGTCACCCGCGCAGGCCAGCTGAAAGAGCGC
AAAATGGGCATCAAAGCCGAAGAGTTCAATCTGAAGAAAGGGCTTCTGCTGGCGGTAATGTGCGGTATCTTCTCCGCAGG
GATGTCGTTCGCGATGAACGCCGCCAAACCGATGCATGATGCCGCCGCGGCGCTCGACGTCGACCCGCTGTACGCAGCGC
TGCCAAGCTACGTGGTGATTATGGGCGGCGGGGCGCTGGTTAACCTTGGCTTCTGCTTTATTCGTCTGGCGAAAGTGAAG
AACCTGTCAGTCAAAGCCGATTTCTCGCTGGCCAAACCGCTTATCATCAGCAACCTTCTGCTCTCCGCCCTCGGCGGTCT
GATGTGGTATCTCCAGTTCTTCTTCTATGCCTGGGGCCACGCCAGCATTCCGGCGCAGTATGATTATATGAGCTGGATGC
TGCACATGAGTTTCTACGTGCTGTGCGGCGGTGTGGTGGGTCTGGTGCTGAAGGAGTGGAACAACGCCGGCCGTCGTCCG
GTGAGCGTACTGAGCCTCGGCTGCGTGGTGATTATCATCGCCGCCAATATCGTCGGTCTGGGAATGGCCAGTTAA

Upstream 100 bases:

>100_bases
ATCCTGTGGCAACGTCCTGAAGGCGGCCAAAGCGGCCAATTTTTACACTCATCCCATCGGAAGCCGCCGTCTCCGATAAA
AAAAGATGAGGATAAAATCA

Downstream 100 bases:

>100_bases
TCACCGGATCATCTGCCTGACAACGACGCTCTTCAGGCGGCGGCGCGACTGCGCTGCCGCCATTGCCCCGGTGACATGCC
GATTTCCCGGCTAAAAACCA

Product: rhamnose-proton symporter

Products: Proton [Cytoplasm]; L-rhamnose [Cytoplasm] [C]

Alternate protein names: L-rhamnose-H(+) transport protein [H]

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MNHAITMGIFWHLIGAASAACFYAPFKKVKHWSWETMWSVGGIVSWLILPWAISATLLPDFWAYYRSFSASTLLPVFLFG
AMWGIGNINYGLTMRYLGMSMGIGIAIGITLIVGTLMTPIINGQFAVLMHTQGGQMTLLGVLVAVIGVGIVTRAGQLKER
KMGIKAEEFNLKKGLLLAVMCGIFSAGMSFAMNAAKPMHDAAAALDVDPLYAALPSYVVIMGGGALVNLGFCFIRLAKVK
NLSVKADFSLAKPLIISNLLLSALGGLMWYLQFFFYAWGHASIPAQYDYMSWMLHMSFYVLCGGVVGLVLKEWNNAGRRP
VSVLSLGCVVIIIAANIVGLGMAS

Sequences:

>Translated_344_residues
MNHAITMGIFWHLIGAASAACFYAPFKKVKHWSWETMWSVGGIVSWLILPWAISATLLPDFWAYYRSFSASTLLPVFLFG
AMWGIGNINYGLTMRYLGMSMGIGIAIGITLIVGTLMTPIINGQFAVLMHTQGGQMTLLGVLVAVIGVGIVTRAGQLKER
KMGIKAEEFNLKKGLLLAVMCGIFSAGMSFAMNAAKPMHDAAAALDVDPLYAALPSYVVIMGGGALVNLGFCFIRLAKVK
NLSVKADFSLAKPLIISNLLLSALGGLMWYLQFFFYAWGHASIPAQYDYMSWMLHMSFYVLCGGVVGLVLKEWNNAGRRP
VSVLSLGCVVIIIAANIVGLGMAS
>Mature_344_residues
MNHAITMGIFWHLIGAASAACFYAPFKKVKHWSWETMWSVGGIVSWLILPWAISATLLPDFWAYYRSFSASTLLPVFLFG
AMWGIGNINYGLTMRYLGMSMGIGIAIGITLIVGTLMTPIINGQFAVLMHTQGGQMTLLGVLVAVIGVGIVTRAGQLKER
KMGIKAEEFNLKKGLLLAVMCGIFSAGMSFAMNAAKPMHDAAAALDVDPLYAALPSYVVIMGGGALVNLGFCFIRLAKVK
NLSVKADFSLAKPLIISNLLLSALGGLMWYLQFFFYAWGHASIPAQYDYMSWMLHMSFYVLCGGVVGLVLKEWNNAGRRP
VSVLSLGCVVIIIAANIVGLGMAS

Specific function: Uptake of L-rhamnose across the boundary membrane with the concomitant transport of protons into the cell (symport system) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the L-rhamnose transporter (TC 2.A.7.6) family [H]

Homologues:

Organism=Escherichia coli, GI1790341, Length=344, Percent_Identity=89.8255813953488, Blast_Score=627, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004673
- InterPro:   IPR010476 [H]

Pfam domain/function: PF06379 RhaT [H]

EC number: NA

Molecular weight: Translated: 37200; Mature: 37200

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHAITMGIFWHLIGAASAACFYAPFKKVKHWSWETMWSVGGIVSWLILPWAISATLLPD
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FWAYYRSFSASTLLPVFLFGAMWGIGNINYGLTMRYLGMSMGIGIAIGITLIVGTLMTPI
HHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
INGQFAVLMHTQGGQMTLLGVLVAVIGVGIVTRAGQLKERKMGIKAEEFNLKKGLLLAVM
HCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHCCHHHHHHHHH
CGIFSAGMSFAMNAAKPMHDAAAALDVDPLYAALPSYVVIMGGGALVNLGFCFIRLAKVK
HHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHH
NLSVKADFSLAKPLIISNLLLSALGGLMWYLQFFFYAWGHASIPAQYDYMSWMLHMSFYV
CCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
LCGGVVGLVLKEWNNAGRRPVSVLSLGCVVIIIAANIVGLGMAS
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNHAITMGIFWHLIGAASAACFYAPFKKVKHWSWETMWSVGGIVSWLILPWAISATLLPD
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FWAYYRSFSASTLLPVFLFGAMWGIGNINYGLTMRYLGMSMGIGIAIGITLIVGTLMTPI
HHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
INGQFAVLMHTQGGQMTLLGVLVAVIGVGIVTRAGQLKERKMGIKAEEFNLKKGLLLAVM
HCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHCCHHHHHHHHH
CGIFSAGMSFAMNAAKPMHDAAAALDVDPLYAALPSYVVIMGGGALVNLGFCFIRLAKVK
HHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHH
NLSVKADFSLAKPLIISNLLLSALGGLMWYLQFFFYAWGHASIPAQYDYMSWMLHMSFYV
CCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
LCGGVVGLVLKEWNNAGRRPVSVLSLGCVVIIIAANIVGLGMAS
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; L-rhamnose [Periplasm] [C]

Specific reaction: Proton [Periplasm] + L-rhamnose [Periplasm] = Proton [Cytoplasm] + L-rhamnose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA