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The map label for this gene is rhaB [H]

Identifier: 238892321

GI number: 238892321

Start: 70475

End: 71941

Strand: Reverse

Name: rhaB [H]

Synonym: KP1_0072

Alternate gene names: 238892321

Gene position: 71941-70475 (Counterclockwise)

Preceding gene: 238892324

Following gene: 238892320

Centisome position: 1.37

GC content: 61.76

Gene sequence:

>1467_bases
ATGAGTATTCGTCATTGTGTCGCTGTCGATTTAGGCGCCTCCAGCGGGCGGGTGATGCTCGCCAGCTATCAGCCCGGGCC
GCGCGCCCTGACGCTGCGCGAAATTCATCGCTTCACCAATAGTCTGCAGAAAGTAGACGGCTTCGACTGCTGGGATGTAG
ATAGCCTGGAAGGCGAGATCCGCCGCGGGCTGGAGAAAGTGTGTGAGCAGGGCATTCTGATAGACAGTATCGGCATCGAT
ACCTGGGGGGTAGATTATGTCCTGCTGGATAAGCAGGGCCAGCGCGTCGGGCTGCCGATTTCCTATCGTGACGACCGCAC
CCAGGGCCTGCTGCGTCACGCTGAAGCGCAGCTGGGCCGGGCGGAAATCTATCGCCGCAGCGGCATTCAGTTTTTGCCGT
TTAACACGCTTTATCAGCTGCGCGCGCTGGTGGAGCAGCAGCCGGAGCTGGTCAGTCAGGCTGCCCATGCCCTGCTGATC
CCCGACTATTTCAGCTTCCGCCTGACCGGCAATCTGAACTGGGAATATACCAACGCCACCACCACCCAGCTGGTCAACAT
TAACAGCGATAGCTGGGATGAGACGTTGCTGAACTGGACCGGCGCGCCGTTGGCGTGGTTCGGAAAGCCGACCCACCCCG
GCAATGTGATAGGCCACTGGATCTGCCCGCAGGGTAACCGAATTCCGGTAGTCGCTGTCGCCAGCCACGACACCGCCAGC
GCGGTGATCGCCTCCCCGCTGGCCGACCGCCATGCCGCCTATCTCTCCTCCGGCACCTGGTCGCTGATGGGGTTTGAAAG
CCTGACGCCGTACACCTGCGACGCGGCGCTGCAGGCCAATATCACCAACGAAGGCGGAGCCGAAGGCCGCTATCGGGTGC
TGAAAAATATCATGGGCCTGTGGCTGCTGCAGCGGGTGCTAAAAGAGCAAAACGTCAGCGATCTGCAGGGGCTGATCGCC
CGCACCGCCGCGCTACCGGCGTGCCGCTTCATAATTGACTGCAACGATGACCGCTTTATCAACCCGGCCAGTATGAGCGC
CGAGATCCAGGCCGCCTGTCGCGACGCCGGGCAGCCGGTTCCTGAAAGCGATGCCGAACTGGCGCGCTGCATTTTCGACA
GCCTGGCGCTGCTCTACGCCCGGGTGCTTAACGAGCTGGCGGCGCTGCGCGGCCACCCCTTCAGCCAGCTGCATATCGTC
GGCGGCGGCTGTCAGAACACGCTGCTCAACCAGCTGTGCGCTGACGCCTGCGGGATCGCCGTCGTGGCCGGCCCGATAGA
GGCCTCCACCCTCGGCAATATCGGCATCCAGTTAATGACCCTCGACGAGCTGGCCAATGTCGATGAGTTTCGTCAGGTAG
TGCGCGGCAACGCGGCGCTCACCACTTTTACCCCCAATCCTGATAGTGAAATTGCCCGTTTCGTGGCGCAGTTTCAGCCA
CAACAGACCAAGGAGCTTTGCGCATGA

Upstream 100 bases:

>100_bases
GCTTTCTTGCCAGCGGCCAGTTTTGGCTGTCCGTAGCGAGAAGGTGTCAGTAAACGGCCTTTTTTAGACTGCGGACAATG
ATTTTAAGAAGGATCGTTTC

Downstream 100 bases:

>100_bases
CCACTCAACTTGAACAAGCCTGGGAAATTGCTAAGCAGCGCTACGCCGCCGTCGGCGTGGATGTCGAGGAGGCCCTGCGC
CAGCTGGACCGTCTGCCCGT

Product: rhamnulokinase

Products: NA

Alternate protein names: Rhamnulose kinase [H]

Number of amino acids: Translated: 488; Mature: 487

Protein sequence:

>488_residues
MSIRHCVAVDLGASSGRVMLASYQPGPRALTLREIHRFTNSLQKVDGFDCWDVDSLEGEIRRGLEKVCEQGILIDSIGID
TWGVDYVLLDKQGQRVGLPISYRDDRTQGLLRHAEAQLGRAEIYRRSGIQFLPFNTLYQLRALVEQQPELVSQAAHALLI
PDYFSFRLTGNLNWEYTNATTTQLVNINSDSWDETLLNWTGAPLAWFGKPTHPGNVIGHWICPQGNRIPVVAVASHDTAS
AVIASPLADRHAAYLSSGTWSLMGFESLTPYTCDAALQANITNEGGAEGRYRVLKNIMGLWLLQRVLKEQNVSDLQGLIA
RTAALPACRFIIDCNDDRFINPASMSAEIQAACRDAGQPVPESDAELARCIFDSLALLYARVLNELAALRGHPFSQLHIV
GGGCQNTLLNQLCADACGIAVVAGPIEASTLGNIGIQLMTLDELANVDEFRQVVRGNAALTTFTPNPDSEIARFVAQFQP
QQTKELCA

Sequences:

>Translated_488_residues
MSIRHCVAVDLGASSGRVMLASYQPGPRALTLREIHRFTNSLQKVDGFDCWDVDSLEGEIRRGLEKVCEQGILIDSIGID
TWGVDYVLLDKQGQRVGLPISYRDDRTQGLLRHAEAQLGRAEIYRRSGIQFLPFNTLYQLRALVEQQPELVSQAAHALLI
PDYFSFRLTGNLNWEYTNATTTQLVNINSDSWDETLLNWTGAPLAWFGKPTHPGNVIGHWICPQGNRIPVVAVASHDTAS
AVIASPLADRHAAYLSSGTWSLMGFESLTPYTCDAALQANITNEGGAEGRYRVLKNIMGLWLLQRVLKEQNVSDLQGLIA
RTAALPACRFIIDCNDDRFINPASMSAEIQAACRDAGQPVPESDAELARCIFDSLALLYARVLNELAALRGHPFSQLHIV
GGGCQNTLLNQLCADACGIAVVAGPIEASTLGNIGIQLMTLDELANVDEFRQVVRGNAALTTFTPNPDSEIARFVAQFQP
QQTKELCA
>Mature_487_residues
SIRHCVAVDLGASSGRVMLASYQPGPRALTLREIHRFTNSLQKVDGFDCWDVDSLEGEIRRGLEKVCEQGILIDSIGIDT
WGVDYVLLDKQGQRVGLPISYRDDRTQGLLRHAEAQLGRAEIYRRSGIQFLPFNTLYQLRALVEQQPELVSQAAHALLIP
DYFSFRLTGNLNWEYTNATTTQLVNINSDSWDETLLNWTGAPLAWFGKPTHPGNVIGHWICPQGNRIPVVAVASHDTASA
VIASPLADRHAAYLSSGTWSLMGFESLTPYTCDAALQANITNEGGAEGRYRVLKNIMGLWLLQRVLKEQNVSDLQGLIAR
TAALPACRFIIDCNDDRFINPASMSAEIQAACRDAGQPVPESDAELARCIFDSLALLYARVLNELAALRGHPFSQLHIVG
GGCQNTLLNQLCADACGIAVVAGPIEASTLGNIGIQLMTLDELANVDEFRQVVRGNAALTTFTPNPDSEIARFVAQFQPQ
QTKELCA

Specific function: Metabolism of L-rhamnose; second step. [C]

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rhamnulokinase family [H]

Homologues:

Organism=Escherichia coli, GI1790338, Length=489, Percent_Identity=78.5276073619632, Blast_Score=794, Evalue=0.0,
Organism=Escherichia coli, GI1789168, Length=372, Percent_Identity=29.0322580645161, Blast_Score=108, Evalue=7e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018484
- InterPro:   IPR013449 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.5 [H]

Molecular weight: Translated: 53474; Mature: 53343

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIRHCVAVDLGASSGRVMLASYQPGPRALTLREIHRFTNSLQKVDGFDCWDVDSLEGEI
CCCCEEEEEEECCCCCCEEEEECCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
RRGLEKVCEQGILIDSIGIDTWGVDYVLLDKQGQRVGLPISYRDDRTQGLLRHAEAQLGR
HHHHHHHHHCCCEEEECCCCCCCCCEEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHHH
AEIYRRSGIQFLPFNTLYQLRALVEQQPELVSQAAHALLIPDYFSFRLTGNLNWEYTNAT
HHHHHHCCCEECCHHHHHHHHHHHHHCHHHHHHHHHEEECCCCEEEEEEECCCEEECCCC
TTQLVNINSDSWDETLLNWTGAPLAWFGKPTHPGNVIGHWICPQGNRIPVVAVASHDTAS
EEEEEECCCCCHHHHHHHCCCCCEEECCCCCCCCCCEEEEECCCCCEEEEEEEECCCCHH
AVIASPLADRHAAYLSSGTWSLMGFESLTPYTCDAALQANITNEGGAEGRYRVLKNIMGL
HHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEECCEEEEECCCCCCCCHHHHHHHHHHHH
WLLQRVLKEQNVSDLQGLIARTAALPACRFIIDCNDDRFINPASMSAEIQAACRDAGQPV
HHHHHHHHHCCHHHHHHHHHHHHHCCEEEEEEECCCCCEECCCCCCHHHHHHHHHCCCCC
PESDAELARCIFDSLALLYARVLNELAALRGHPFSQLHIVGGGCQNTLLNQLCADACGIA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCEE
VVAGPIEASTLGNIGIQLMTLDELANVDEFRQVVRGNAALTTFTPNPDSEIARFVAQFQP
EEECCCCCCHHCCCCEEEEEHHHHCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCC
QQTKELCA
HHHHHHCC
>Mature Secondary Structure 
SIRHCVAVDLGASSGRVMLASYQPGPRALTLREIHRFTNSLQKVDGFDCWDVDSLEGEI
CCCEEEEEEECCCCCCEEEEECCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
RRGLEKVCEQGILIDSIGIDTWGVDYVLLDKQGQRVGLPISYRDDRTQGLLRHAEAQLGR
HHHHHHHHHCCCEEEECCCCCCCCCEEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHHH
AEIYRRSGIQFLPFNTLYQLRALVEQQPELVSQAAHALLIPDYFSFRLTGNLNWEYTNAT
HHHHHHCCCEECCHHHHHHHHHHHHHCHHHHHHHHHEEECCCCEEEEEEECCCEEECCCC
TTQLVNINSDSWDETLLNWTGAPLAWFGKPTHPGNVIGHWICPQGNRIPVVAVASHDTAS
EEEEEECCCCCHHHHHHHCCCCCEEECCCCCCCCCCEEEEECCCCCEEEEEEEECCCCHH
AVIASPLADRHAAYLSSGTWSLMGFESLTPYTCDAALQANITNEGGAEGRYRVLKNIMGL
HHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEECCEEEEECCCCCCCCHHHHHHHHHHHH
WLLQRVLKEQNVSDLQGLIARTAALPACRFIIDCNDDRFINPASMSAEIQAACRDAGQPV
HHHHHHHHHCCHHHHHHHHHHHHHCCEEEEEEECCCCCEECCCCCCHHHHHHHHHCCCCC
PESDAELARCIFDSLALLYARVLNELAALRGHPFSQLHIVGGGCQNTLLNQLCADACGIA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCEE
VVAGPIEASTLGNIGIQLMTLDELANVDEFRQVVRGNAALTTFTPNPDSEIARFVAQFQP
EEECCCCCCHHCCCCEEEEEHHHHCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCC
QQTKELCA
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA