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The map label for this gene is rbn [C]

Identifier: 238892286

GI number: 238892286

Start: 39331

End: 40191

Strand: Direct

Name: rbn [C]

Synonym: KP1_0033

Alternate gene names: 238892286

Gene position: 39331-40191 (Clockwise)

Preceding gene: 238892285

Following gene: 238892287

Centisome position: 0.75

GC content: 55.17

Gene sequence:

>861_bases
ATGCTAAAAACCGTTCATCAAAAATTACTCCACCATACCCGGCCGCTGCTGGCGTGGCTAAAGCTGCTGTGGCGGCGCAT
TGATGAAGATCATATGACCACCCTGGCGGGGAACCTCGCCTATGTGTCATTACTGTCCCTGGTGCCGCTGATTGCCGTCG
TGTTCGCGCTGTTTGCGGCCTTTCCTATGTTCTCCGAAGTCAGCGTGCAGATCCGTCATTTTATCTTCGCCAATTTTATT
CCGGCGACCGGGGATGTAATCCAGGGATATATCGAGCAGTTCGTGGCCAACTCCAGCCGCATGACCGCCGTAGGCGCCTT
TGGCCTGATCGTCACCTCGCTGCTGCTGATGTACTCGATCGACAGCGCGCTAAACACCATCTGGCGCAGCACGCGCAGCC
GCCCCAAAGTTTATTCCTTTGCCGTTTACTGGATGATCCTGACCCTCGGCCCGCTGCTGGCGGGCGCCAGCCTGGCGATC
AGTTCCTATCTGCTGTCGCTGCGCTGGGCAAGCGACCTGGACGGCGTAATTGATAATCTGCTCCGCCTATTTCCGCTGAT
CCTCTCCTGGGCAGCGTTCTGGCTGCTCTATAGTATTGTACCGACTACCCAGGTACGTAACCGCGACGCGGTGATCGGGG
CGCTGGTGGCGGCGCTGCTGTTTGAGGCAGGTAAAAAGGCGTTTGCCCTCTATATCACCACCTTTCCGTCCTATCAGCTA
ATTTATGGCGTGATTTCGGTGGTGCCGATTTTGTTCGTCTGGGTGTACTGGACCTGGTGTATCGTCTTGCTTGGCGCTGA
AATTACTGTCACTCTCGGTGAATACCGCAAACTTAAAACAGAAGAAACAGAACAACCATGA

Upstream 100 bases:

>100_bases
ATGATAACGTCGATAATATAGCAGGGGCCAACCGGTTGGGGATCACCAGTATCCTGGTGACTGGTAAGGAGACCATCCCT
GACTATTTCGCGAAACAGCT

Downstream 100 bases:

>100_bases
TTGCATTAATTCAACGCGTATCCCGTGCAAGCGTTACCGTGGCGGACGAGGTGACGGGCGAAATTGGCCCGGGGCTTCTG
GTGCTGCTGGGCGTCGAGAA

Product: ribonuclease BN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MLKTVHQKLLHHTRPLLAWLKLLWRRIDEDHMTTLAGNLAYVSLLSLVPLIAVVFALFAAFPMFSEVSVQIRHFIFANFI
PATGDVIQGYIEQFVANSSRMTAVGAFGLIVTSLLLMYSIDSALNTIWRSTRSRPKVYSFAVYWMILTLGPLLAGASLAI
SSYLLSLRWASDLDGVIDNLLRLFPLILSWAAFWLLYSIVPTTQVRNRDAVIGALVAALLFEAGKKAFALYITTFPSYQL
IYGVISVVPILFVWVYWTWCIVLLGAEITVTLGEYRKLKTEETEQP

Sequences:

>Translated_286_residues
MLKTVHQKLLHHTRPLLAWLKLLWRRIDEDHMTTLAGNLAYVSLLSLVPLIAVVFALFAAFPMFSEVSVQIRHFIFANFI
PATGDVIQGYIEQFVANSSRMTAVGAFGLIVTSLLLMYSIDSALNTIWRSTRSRPKVYSFAVYWMILTLGPLLAGASLAI
SSYLLSLRWASDLDGVIDNLLRLFPLILSWAAFWLLYSIVPTTQVRNRDAVIGALVAALLFEAGKKAFALYITTFPSYQL
IYGVISVVPILFVWVYWTWCIVLLGAEITVTLGEYRKLKTEETEQP
>Mature_286_residues
MLKTVHQKLLHHTRPLLAWLKLLWRRIDEDHMTTLAGNLAYVSLLSLVPLIAVVFALFAAFPMFSEVSVQIRHFIFANFI
PATGDVIQGYIEQFVANSSRMTAVGAFGLIVTSLLLMYSIDSALNTIWRSTRSRPKVYSFAVYWMILTLGPLLAGASLAI
SSYLLSLRWASDLDGVIDNLLRLFPLILSWAAFWLLYSIVPTTQVRNRDAVIGALVAALLFEAGKKAFALYITTFPSYQL
IYGVISVVPILFVWVYWTWCIVLLGAEITVTLGEYRKLKTEETEQP

Specific function: 3' To 5' Exoribonuclease Necessary For 3'Maturation Of tRNA Molecules. [C]

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0761 family

Homologues:

Organism=Escherichia coli, GI1790319, Length=290, Percent_Identity=83.448275862069, Blast_Score=494, Evalue=1e-141,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4136_KLEP7 (A6TG76)

Other databases:

- EMBL:   CP000647
- RefSeq:   YP_001337827.1
- STRING:   A6TG76
- GeneID:   5342643
- GenomeReviews:   CP000647_GR
- KEGG:   kpn:KPN_04181
- eggNOG:   COG1295
- HOGENOM:   HBG451793
- OMA:   ELAQIQV
- ProtClustDB:   PRK01637
- HAMAP:   MF_00672
- InterPro:   IPR017039
- InterPro:   IPR004664
- PIRSF:   PIRSF035875
- TIGRFAMs:   TIGR00765

Pfam domain/function: PF03631 Ribonuclease_BN

EC number: 3.1.-.- [C]

Molecular weight: Translated: 32213; Mature: 32213

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x17e6fc5c)-; HASH(0x1854a9a0)-; HASH(0x185b6cf4)-; HASH(0x1853de48)-; HASH(0x180bb2dc)-; HASH(0x1863a15c)-; HASH(0x1803ab10)-;

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKTVHQKLLHHTRPLLAWLKLLWRRIDEDHMTTLAGNLAYVSLLSLVPLIAVVFALFAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FPMFSEVSVQIRHFIFANFIPATGDVIQGYIEQFVANSSRMTAVGAFGLIVTSLLLMYSI
HCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
DSALNTIWRSTRSRPKVYSFAVYWMILTLGPLLAGASLAISSYLLSLRWASDLDGVIDNL
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRLFPLILSWAAFWLLYSIVPTTQVRNRDAVIGALVAALLFEAGKKAFALYITTFPSYQL
HHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHH
IYGVISVVPILFVWVYWTWCIVLLGAEITVTLGEYRKLKTEETEQP
HHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHHHHCCCCCCCH
>Mature Secondary Structure
MLKTVHQKLLHHTRPLLAWLKLLWRRIDEDHMTTLAGNLAYVSLLSLVPLIAVVFALFAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FPMFSEVSVQIRHFIFANFIPATGDVIQGYIEQFVANSSRMTAVGAFGLIVTSLLLMYSI
HCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
DSALNTIWRSTRSRPKVYSFAVYWMILTLGPLLAGASLAISSYLLSLRWASDLDGVIDNL
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRLFPLILSWAAFWLLYSIVPTTQVRNRDAVIGALVAALLFEAGKKAFALYITTFPSYQL
HHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHH
IYGVISVVPILFVWVYWTWCIVLLGAEITVTLGEYRKLKTEETEQP
HHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHHHHCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA