| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028968
Identifier: 238028968
GI number: 238028968
Start: 3902961
End: 3903380
Strand: Direct
Name: 238028968
Synonym: bglu_1g34370
Alternate gene names: NA
Gene position: 3902961-3903380 (Clockwise)
Preceding gene: 238028967
Following gene: NA
Centisome position: 99.91
GC content: 66.9
Gene sequence:
>420_bases ATGCCTACGCCCGAGGAAAAAGCGGCGTTCTCCGAACGTCTCAAATTCGCCCTGCTGCGCAGCCCGGAAAAAGTGTCGGG CGCGACGGAGCTCGCGCTGCATTTCAATCTGCGGCACCACGGCGAGCAGCCGGTCTCGCCGCAGACGGCGCACAAGTGGC TGAGCGGTCGCACCATCCCGACGCCCGACAAGCTCGCGACGCTGGCCGACTGGCTGCGCGTCGATCCGCACTGGCTGCAC TACGGGCCGCCGCCCGCCACGGCGCGCAACACGCCGAAGCCACTGCCGCGCGACGAAAAGTATCCGCCCACGCCCGAGAC GATCGAACTCGCGACCAAGATCGAGGCGCTGTCGCCGCACCATCGCTACCTCGTGCAGGAGCTGATCGAACAGTTCTACG GCGACGCCTCCGAGCATTGA
Upstream 100 bases:
>100_bases ATGCGGTCGATCATGGTTTGGTTGAATCCACCCTTATTTGAGATAAATATAGCGCGACCAGTTGTCACTGGCGGCGAATG CCGCTTGCACAATCGTCCGC
Downstream 100 bases:
>100_bases TCCGCCCCGCTTTCAGACGCGTCCGCGCGACGCGAGCCGGCCGGCCGCGCGCGCCGCGGGTGCCCCTTCACGATTGCCGC CTGTCATGAAAAAACGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MPTPEEKAAFSERLKFALLRSPEKVSGATELALHFNLRHHGEQPVSPQTAHKWLSGRTIPTPDKLATLADWLRVDPHWLH YGPPPATARNTPKPLPRDEKYPPTPETIELATKIEALSPHHRYLVQELIEQFYGDASEH
Sequences:
>Translated_139_residues MPTPEEKAAFSERLKFALLRSPEKVSGATELALHFNLRHHGEQPVSPQTAHKWLSGRTIPTPDKLATLADWLRVDPHWLH YGPPPATARNTPKPLPRDEKYPPTPETIELATKIEALSPHHRYLVQELIEQFYGDASEH >Mature_138_residues PTPEEKAAFSERLKFALLRSPEKVSGATELALHFNLRHHGEQPVSPQTAHKWLSGRTIPTPDKLATLADWLRVDPHWLHY GPPPATARNTPKPLPRDEKYPPTPETIELATKIEALSPHHRYLVQELIEQFYGDASEH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15792; Mature: 15661
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTPEEKAAFSERLKFALLRSPEKVSGATELALHFNLRHHGEQPVSPQTAHKWLSGRTIP CCCCHHHHHHHHHHHHHHHCCCHHHCCHHEEHEEECHHHCCCCCCCHHHHHHHHCCCCCC TPDKLATLADWLRVDPHWLHYGPPPATARNTPKPLPRDEKYPPTPETIELATKIEALSPH CHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHH HRYLVQELIEQFYGDASEH HHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PTPEEKAAFSERLKFALLRSPEKVSGATELALHFNLRHHGEQPVSPQTAHKWLSGRTIP CCCHHHHHHHHHHHHHHHCCCHHHCCHHEEHEEECHHHCCCCCCCHHHHHHHHCCCCCC TPDKLATLADWLRVDPHWLHYGPPPATARNTPKPLPRDEKYPPTPETIELATKIEALSPH CHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHH HRYLVQELIEQFYGDASEH HHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA