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The map label for this gene is ybeQ [H]

Identifier: 238028934

GI number: 238028934

Start: 3863626

End: 3864456

Strand: Reverse

Name: ybeQ [H]

Synonym: bglu_1g33990

Alternate gene names: 238028934

Gene position: 3864456-3863626 (Counterclockwise)

Preceding gene: 238028935

Following gene: 238028928

Centisome position: 98.92

GC content: 75.09

Gene sequence:

>831_bases
ATGAACGGCTTTGCGATGCGGGCGCGGCGCGCCGCGCAGGAAACGCCCGCGCCTCGGCGCATGGGCGGCGTGCTCGCGCT
CGGCCTGGCGCTGGCGTGGTGCGCGGCGAACGGGCCGGCGCAGGCGGCCGATACCGCGGCCGCGGCATCGGCGTCCGCCG
GCCGGCCGGCCGCGCAGCCGGCGCGGCACGGCAAGCCGAATGCCGCGCGCGCGATCACCGAATCGGCCGTCGCGGACTAC
AACGCGGGCGACTATCCGGCCGCGCTGGCCGGCTTTCGGCGCGCGGCCGCGCGCGGCGACCGGCTCGCTCAGTTCGATTA
CGCGATGATGCTGCTCAAGGGCGAGGGCACGGCCGCGAACCTGCCGGACGGCGTGCGCTGGCTGACCGAGGCGGCCCGGG
CCGGCATGACGCAAGCGCAGTACGTGCTGGCGACGATGTACGACGACGGCCAGTTCGTCGCGCGCGATGCGGCGGCGGCC
CACGGCTGGTATCTGAAGGCGGCGCGGCAGGGCAATGTGCAGGCCGAACTCGCGCTCGCCCACCAGTTCCTCGACGGCCG
CGGCACGCCGCGCGACAACCACGAGGCGTTCATCTGGTATCAGCGGGCGGCCGACGCTGGCGAGCCGGTCGCGCAATACG
TGACCGCCTCGTTCTACGAGCGCGGCGGCGACGGCGTGGCGGTGAACCTGAACATCGCGCGCGCCTACTACGCGGCCGCC
GCGGCGCAGGGCGACGAGGTGGCCGCGCTGAAGTATCAGGAGCTCAGCGGCTTGTTGCGCGCGCAGGCGGCGGCCTCGCA
GGCATCGGGCGCGCAGCCGGCCGCGCAGTGA

Upstream 100 bases:

>100_bases
GCGCACGCCCTTGCCCGATCACAACAACGACTTCGCCGCTCCAAGCGGCGCAACCCGGGTCGCACGCGCGCGGGCCGCGC
CTGACGCAGGAGGAAGGGAC

Downstream 100 bases:

>100_bases
GCGCGCGCCGCCCTCGCCAATGAAACAGGCCGGCTCACGCGGGCATCCTGCCCGACCACCCGGGCGGGGCTGGACCGCTA
CGACTTCATCAGCCGCTTCT

Product: Sel1 repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MNGFAMRARRAAQETPAPRRMGGVLALGLALAWCAANGPAQAADTAAAASASAGRPAAQPARHGKPNAARAITESAVADY
NAGDYPAALAGFRRAAARGDRLAQFDYAMMLLKGEGTAANLPDGVRWLTEAARAGMTQAQYVLATMYDDGQFVARDAAAA
HGWYLKAARQGNVQAELALAHQFLDGRGTPRDNHEAFIWYQRAADAGEPVAQYVTASFYERGGDGVAVNLNIARAYYAAA
AAQGDEVAALKYQELSGLLRAQAAASQASGAQPAAQ

Sequences:

>Translated_276_residues
MNGFAMRARRAAQETPAPRRMGGVLALGLALAWCAANGPAQAADTAAAASASAGRPAAQPARHGKPNAARAITESAVADY
NAGDYPAALAGFRRAAARGDRLAQFDYAMMLLKGEGTAANLPDGVRWLTEAARAGMTQAQYVLATMYDDGQFVARDAAAA
HGWYLKAARQGNVQAELALAHQFLDGRGTPRDNHEAFIWYQRAADAGEPVAQYVTASFYERGGDGVAVNLNIARAYYAAA
AAQGDEVAALKYQELSGLLRAQAAASQASGAQPAAQ
>Mature_276_residues
MNGFAMRARRAAQETPAPRRMGGVLALGLALAWCAANGPAQAADTAAAASASAGRPAAQPARHGKPNAARAITESAVADY
NAGDYPAALAGFRRAAARGDRLAQFDYAMMLLKGEGTAANLPDGVRWLTEAARAGMTQAQYVLATMYDDGQFVARDAAAA
HGWYLKAARQGNVQAELALAHQFLDGRGTPRDNHEAFIWYQRAADAGEPVAQYVTASFYERGGDGVAVNLNIARAYYAAA
AAQGDEVAALKYQELSGLLRAQAAASQASGAQPAAQ

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Escherichia coli, GI87081769, Length=165, Percent_Identity=33.3333333333333, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 28743; Mature: 28743

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGFAMRARRAAQETPAPRRMGGVLALGLALAWCAANGPAQAADTAAAASASAGRPAAQP
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCC
ARHGKPNAARAITESAVADYNAGDYPAALAGFRRAAARGDRLAQFDYAMMLLKGEGTAAN
CCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHEEEEEEECCCCCCC
LPDGVRWLTEAARAGMTQAQYVLATMYDDGQFVARDAAAAHGWYLKAARQGNVQAELALA
CCHHHHHHHHHHHCCCHHHHEEEEEEECCCCEEHHHHHHHCCCEEEECCCCCCHHHHHHH
HQFLDGRGTPRDNHEAFIWYQRAADAGEPVAQYVTASFYERGGDGVAVNLNIARAYYAAA
HHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHH
AAQGDEVAALKYQELSGLLRAQAAASQASGAQPAAQ
HCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNGFAMRARRAAQETPAPRRMGGVLALGLALAWCAANGPAQAADTAAAASASAGRPAAQP
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCC
ARHGKPNAARAITESAVADYNAGDYPAALAGFRRAAARGDRLAQFDYAMMLLKGEGTAAN
CCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHEEEEEEECCCCCCC
LPDGVRWLTEAARAGMTQAQYVLATMYDDGQFVARDAAAAHGWYLKAARQGNVQAELALA
CCHHHHHHHHHHHCCCHHHHEEEEEEECCCCEEHHHHHHHCCCEEEECCCCCCHHHHHHH
HQFLDGRGTPRDNHEAFIWYQRAADAGEPVAQYVTASFYERGGDGVAVNLNIARAYYAAA
HHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHH
AAQGDEVAALKYQELSGLLRAQAAASQASGAQPAAQ
HCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]