| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is mreC [H]
Identifier: 238028930
GI number: 238028930
Start: 3858373
End: 3859515
Strand: Direct
Name: mreC [H]
Synonym: bglu_1g33950
Alternate gene names: 238028930
Gene position: 3858373-3859515 (Clockwise)
Preceding gene: 238028929
Following gene: 238028931
Centisome position: 98.77
GC content: 71.65
Gene sequence:
>1143_bases ATGGAATACAGTCCGCCGCCCCTCTTCAAGCAAGGTCCGTCCGCGCTCGCGCGGCTGATCTTCTTCGTCGCGCTGGCGAT CGCGCTCCTCGTTTCGGACGCGCGCTTCAGTACGCTCGAAATCGTCCGGGGCATTCTTGGCACGGCGCTCTACCCGCTGC AGCGGGCCGCGCTGGTGCCGCGCGACCTGTTCATGGGCGCGGCCGATCTGGCCGCGACCAATGCGTCGCTGCGCCACGAC AACCAGCAGCTGCACCAGCGCAACCTGGCGCTGTCCCTGCAGGCGAACCAGGCCGCCCAGCTCGCGGCCGACAACGCCCA CCTGCGCGCCGTGCTCGGCCTGCGCGCGCGCATCGCCGTGCAGGCCACGCCGGTCGAGCTCCAGTACGACACCAGCGACC CGTTCTCGCAGAAGGTGGTGATCGGCCGCGGCTCGCACGACGACATCCAGAACGGCGCGCCGGTGGTCACCGAGGACGGC GTGATCGGCCAGGTCACGCGCGTGTTCCCGCTGCAGGCCGAAATCACGCTGGTCACCGACCGCGATCTCGCGATCCCCGT GCAGGTGCTGCGCACCGGGCTGCGCAGCGTGATCTACGGCACCCCCAAGGGCGATTCGCTGGACTTGCGCTTCGTGCCGA CCAGCGCGGACCTGCTGGTCGGCGACGAACTCGTGACGAGCGGCCTCGACGGCCTCTACCCGCCCGGGCTGCCGGTCGCG AAGGTGGTGCGCATCGACAAGCTCGCCGACACCGCGTTCGCGCATGTCGTCTGCATGCCGATCGCCGCGGTGCGCGGCGC GCGCGAGATGCTGGTGCTGCATTACCAGAACGACCTGCCGCCGCGCCCGGTCGATCCGGACCCGGCCGCCGACAAGAACG CGAAGGGTAAAAAGGGCGCGAAAACCGCCGACAAGGGCAAGGGCGACGAGAACGGCCGGCCGGCGGCCGCGGCCAGCGGC GCCGGATCGGCCGAGAAGCCGGCTGAAAAGCCGACCGACAAGCCGGCTGAAAAGCCGGGCGAGAAGCCGGCCGGGAAGTC GGGCGAGAAGCCGGCCGGAAAATCCGCCGCGCCGGCCGCCGCCAGACCGGCAGCGCGCCCCGCGGCCCCGGCCGCCGCCC CGTCCCGCGGAGCGCAGCCATGA
Upstream 100 bases:
>100_bases TAACGCGCGCGCGAAGCCACGGCTTGTCACGATCAGCCGAACCGCCGCGCGTTTTGCGCGTCTGAGGAACATTTAACCGA TCAAGCGCCCGGCGCCGACC
Downstream 100 bases:
>100_bases GCCGTCCGCAATACATCCTGCAGCCGGTCAATCCCTATTTCATCGCCTTCAGCCTCTCGGCCGCGTTCCTGCTGAACCTG ATGCCGTGGGGGCGCCTGCC
Product: rod shape-determining protein MreC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MEYSPPPLFKQGPSALARLIFFVALAIALLVSDARFSTLEIVRGILGTALYPLQRAALVPRDLFMGAADLAATNASLRHD NQQLHQRNLALSLQANQAAQLAADNAHLRAVLGLRARIAVQATPVELQYDTSDPFSQKVVIGRGSHDDIQNGAPVVTEDG VIGQVTRVFPLQAEITLVTDRDLAIPVQVLRTGLRSVIYGTPKGDSLDLRFVPTSADLLVGDELVTSGLDGLYPPGLPVA KVVRIDKLADTAFAHVVCMPIAAVRGAREMLVLHYQNDLPPRPVDPDPAADKNAKGKKGAKTADKGKGDENGRPAAAASG AGSAEKPAEKPTDKPAEKPGEKPAGKSGEKPAGKSAAPAAARPAARPAAPAAAPSRGAQP
Sequences:
>Translated_380_residues MEYSPPPLFKQGPSALARLIFFVALAIALLVSDARFSTLEIVRGILGTALYPLQRAALVPRDLFMGAADLAATNASLRHD NQQLHQRNLALSLQANQAAQLAADNAHLRAVLGLRARIAVQATPVELQYDTSDPFSQKVVIGRGSHDDIQNGAPVVTEDG VIGQVTRVFPLQAEITLVTDRDLAIPVQVLRTGLRSVIYGTPKGDSLDLRFVPTSADLLVGDELVTSGLDGLYPPGLPVA KVVRIDKLADTAFAHVVCMPIAAVRGAREMLVLHYQNDLPPRPVDPDPAADKNAKGKKGAKTADKGKGDENGRPAAAASG AGSAEKPAEKPTDKPAEKPGEKPAGKSGEKPAGKSAAPAAARPAARPAAPAAAPSRGAQP >Mature_380_residues MEYSPPPLFKQGPSALARLIFFVALAIALLVSDARFSTLEIVRGILGTALYPLQRAALVPRDLFMGAADLAATNASLRHD NQQLHQRNLALSLQANQAAQLAADNAHLRAVLGLRARIAVQATPVELQYDTSDPFSQKVVIGRGSHDDIQNGAPVVTEDG VIGQVTRVFPLQAEITLVTDRDLAIPVQVLRTGLRSVIYGTPKGDSLDLRFVPTSADLLVGDELVTSGLDGLYPPGLPVA KVVRIDKLADTAFAHVVCMPIAAVRGAREMLVLHYQNDLPPRPVDPDPAADKNAKGKKGAKTADKGKGDENGRPAAAASG AGSAEKPAEKPTDKPAEKPGEKPAGKSGEKPAGKSAAPAAARPAARPAAPAAAPSRGAQP
Specific function: Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins [H]
COG id: COG1792
COG function: function code M; Cell shape-determining protein
Gene ontology:
Cell location: Inner Membrane-Anchored [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mreC family [H]
Homologues:
Organism=Escherichia coli, GI1789648, Length=256, Percent_Identity=34.375, Blast_Score=138, Evalue=5e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007221 - InterPro: IPR005223 [H]
Pfam domain/function: PF04085 MreC [H]
EC number: NA
Molecular weight: Translated: 39678; Mature: 39678
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYSPPPLFKQGPSALARLIFFVALAIALLVSDARFSTLEIVRGILGTALYPLQRAALVP CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC RDLFMGAADLAATNASLRHDNQQLHQRNLALSLQANQAAQLAADNAHLRAVLGLRARIAV HHHHHCHHHHHHCCCHHHCCHHHHHHHCEEEEEECCCHHHHHCCCHHHHHHHHHHEEEEE QATPVELQYDTSDPFSQKVVIGRGSHDDIQNGAPVVTEDGVIGQVTRVFPLQAEITLVTD EECCEEEEECCCCCCCCEEEEECCCCCHHCCCCCEEECCCCHHHHHHEEEEEEEEEEEEC RDLAIPVQVLRTGLRSVIYGTPKGDSLDLRFVPTSADLLVGDELVTSGLDGLYPPGLPVA CCCCCHHHHHHHHHHHHEECCCCCCCEEEEEECCCCCEEECHHHHHCCCCCCCCCCCCHH KVVRIDKLADTAFAHVVCMPIAAVRGAREMLVLHYQNDLPPRPVDPDPAADKNAKGKKGA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC KTADKGKGDENGRPAAAASGAGSAEKPAEKPTDKPAEKPGEKPAGKSGEKPAGKSAAPAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ARPAARPAAPAAAPSRGAQP CCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MEYSPPPLFKQGPSALARLIFFVALAIALLVSDARFSTLEIVRGILGTALYPLQRAALVP CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC RDLFMGAADLAATNASLRHDNQQLHQRNLALSLQANQAAQLAADNAHLRAVLGLRARIAV HHHHHCHHHHHHCCCHHHCCHHHHHHHCEEEEEECCCHHHHHCCCHHHHHHHHHHEEEEE QATPVELQYDTSDPFSQKVVIGRGSHDDIQNGAPVVTEDGVIGQVTRVFPLQAEITLVTD EECCEEEEECCCCCCCCEEEEECCCCCHHCCCCCEEECCCCHHHHHHEEEEEEEEEEEEC RDLAIPVQVLRTGLRSVIYGTPKGDSLDLRFVPTSADLLVGDELVTSGLDGLYPPGLPVA CCCCCHHHHHHHHHHHHEECCCCCCCEEEEEECCCCCEEECHHHHHCCCCCCCCCCCCHH KVVRIDKLADTAFAHVVCMPIAAVRGAREMLVLHYQNDLPPRPVDPDPAADKNAKGKKGA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC KTADKGKGDENGRPAAAASGAGSAEKPAEKPTDKPAEKPGEKPAGKSGEKPAGKSAAPAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ARPAARPAAPAAAPSRGAQP CCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2687239; 9278503; 3049542 [H]