| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is metK [H]
Identifier: 238028903
GI number: 238028903
Start: 3829330
End: 3830520
Strand: Reverse
Name: metK [H]
Synonym: bglu_1g33680
Alternate gene names: 238028903
Gene position: 3830520-3829330 (Counterclockwise)
Preceding gene: 238028913
Following gene: 238028901
Centisome position: 98.05
GC content: 65.49
Gene sequence:
>1191_bases GTGGCAAACGATTATCTCTTCACGTCCGAATCCGTTTCCGAAGGCCATCCGGACAAAGTTGCCGACCAGATCTCCGACGC GATTCTCGATGCCATCCTCACGCAGGACAAATACTCGCGTGTTGCCGCCGAGACGCTGTGCAACACGGGGCTTGTCGTGC TGGCGGGTGAGATCACCACGACCGCCAACATCGACTACATCCAGATCGCGCGCGACACGATCCGCCGCATCGGCTACGAC AACACCGACTTCGGCATCGACTACAAGGGCTGCGCGGTGCTCGTCGCCTACGACAAGCAGTCGCCGGACATCGCGCAAGG CGTTGATCGCGCGCATGACAACAACCTCGACCAGGGTGCCGGTGACCAGGGCCTGATGTTCGGTTACGCGTGCGATGAAA CGCCCGAACTGATGCCGCTGCCGATTTACCTGGCGCACCGTCTCGTCGAGCGTCAGGCCAATCTGCGCCGCGACGGCCGC CTGAGCTGGCTGCGTCCCGATGCGAAGTCGCAGGTCACGGTCCGCTACGTCGACGGCAAGCCGCACGCGATCGACACCGT CGTGCTGTCGACGCAGCACGCCCCGGACATTGATCTGCCGCAATTGCGCGAAGCCGTGATCGAGGAGATCATCAAGCCGA CGCTGCCGGCCGAATTGATCAAGGGCGACATCAAGTTCCTGGTGAACCCGACCGGCCGTTTCGTGATCGGTGGCCCGCAG GGCGACTGCGGCCTGACGGGCCGCAAGATCATCGTCGATACCTACGGCGGTGCCGCGCCGCATGGCGGCGGCGCGTTCTC GGGCAAGGACCCGTCGAAGGTCGACCGCTCGGCCGCCTACGCGGGCCGCTACGTCGCCAAGAACATCGTGGCCGCGGGCC TGGCCTCGCGCGCGCTGATCCAGGTGTCGTATGCGATCGGCGTGGCCGAGCCGACCTCGGTGATGGTCAACACGTTCGGC ACCGGCAAGGTCTCGGACGAGACGATCACGAAGCTCGTGCGCGAGCACTTCGACCTGCGTCCGAAGGGCATCGTGCAGAT GCTCGATCTGCTGCGCCCGATCTACGAGAAGACGGCGGCCTACGGCCACTTCGGCCGTGCCGAGCCGGAGTTCTCTTGGG AAGCGACCGACAAGGCGCTGGTCCTCGCCGAAGCAGCGGGCGTCGCCCCCGCCGTCGCGCAGCCGGCATGA
Upstream 100 bases:
>100_bases TGCCTGTCCGGGTCAAGGAATCCGCTAAAGCGTCGCCACTTCATCCGGTTCCGAAGCTGGCTACGTGAATGCAACCGTAA CCACCAAGGAGCTTAGCCAA
Downstream 100 bases:
>100_bases AACGCGCATGATGCGCCGCGTTCCGATTTGGGCCTGAACGGCCTGAATGCAAAAAACCCCGGCTTGCCGGGGTTTTTTCT TGGGCGCGCGCGGCGTGCAG
Product: S-adenosylmethionine synthetase
Products: NA
Alternate protein names: AdoMet synthase; MAT; Methionine adenosyltransferase [H]
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MANDYLFTSESVSEGHPDKVADQISDAILDAILTQDKYSRVAAETLCNTGLVVLAGEITTTANIDYIQIARDTIRRIGYD NTDFGIDYKGCAVLVAYDKQSPDIAQGVDRAHDNNLDQGAGDQGLMFGYACDETPELMPLPIYLAHRLVERQANLRRDGR LSWLRPDAKSQVTVRYVDGKPHAIDTVVLSTQHAPDIDLPQLREAVIEEIIKPTLPAELIKGDIKFLVNPTGRFVIGGPQ GDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFG TGKVSDETITKLVREHFDLRPKGIVQMLDLLRPIYEKTAAYGHFGRAEPEFSWEATDKALVLAEAAGVAPAVAQPA
Sequences:
>Translated_396_residues MANDYLFTSESVSEGHPDKVADQISDAILDAILTQDKYSRVAAETLCNTGLVVLAGEITTTANIDYIQIARDTIRRIGYD NTDFGIDYKGCAVLVAYDKQSPDIAQGVDRAHDNNLDQGAGDQGLMFGYACDETPELMPLPIYLAHRLVERQANLRRDGR LSWLRPDAKSQVTVRYVDGKPHAIDTVVLSTQHAPDIDLPQLREAVIEEIIKPTLPAELIKGDIKFLVNPTGRFVIGGPQ GDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFG TGKVSDETITKLVREHFDLRPKGIVQMLDLLRPIYEKTAAYGHFGRAEPEFSWEATDKALVLAEAAGVAPAVAQPA >Mature_395_residues ANDYLFTSESVSEGHPDKVADQISDAILDAILTQDKYSRVAAETLCNTGLVVLAGEITTTANIDYIQIARDTIRRIGYDN TDFGIDYKGCAVLVAYDKQSPDIAQGVDRAHDNNLDQGAGDQGLMFGYACDETPELMPLPIYLAHRLVERQANLRRDGRL SWLRPDAKSQVTVRYVDGKPHAIDTVVLSTQHAPDIDLPQLREAVIEEIIKPTLPAELIKGDIKFLVNPTGRFVIGGPQG DCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGT GKVSDETITKLVREHFDLRPKGIVQMLDLLRPIYEKTAAYGHFGRAEPEFSWEATDKALVLAEAAGVAPAVAQPA
Specific function: Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the e
COG id: COG0192
COG function: function code H; S-adenosylmethionine synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AdoMet synthase family [H]
Homologues:
Organism=Homo sapiens, GI4557737, Length=380, Percent_Identity=58.9473684210526, Blast_Score=431, Evalue=1e-121, Organism=Homo sapiens, GI5174529, Length=380, Percent_Identity=57.1052631578947, Blast_Score=419, Evalue=1e-117, Organism=Escherichia coli, GI1789311, Length=384, Percent_Identity=70.5729166666667, Blast_Score=540, Evalue=1e-155, Organism=Caenorhabditis elegans, GI17538498, Length=397, Percent_Identity=55.919395465995, Blast_Score=427, Evalue=1e-120, Organism=Caenorhabditis elegans, GI17538494, Length=376, Percent_Identity=57.4468085106383, Blast_Score=422, Evalue=1e-118, Organism=Caenorhabditis elegans, GI25145633, Length=380, Percent_Identity=57.3684210526316, Blast_Score=421, Evalue=1e-118, Organism=Caenorhabditis elegans, GI17551082, Length=389, Percent_Identity=55.2699228791774, Blast_Score=418, Evalue=1e-117, Organism=Caenorhabditis elegans, GI32565911, Length=349, Percent_Identity=54.4412607449857, Blast_Score=361, Evalue=1e-100, Organism=Caenorhabditis elegans, GI32565905, Length=376, Percent_Identity=52.3936170212766, Blast_Score=358, Evalue=4e-99, Organism=Caenorhabditis elegans, GI25145635, Length=332, Percent_Identity=55.7228915662651, Blast_Score=352, Evalue=1e-97, Organism=Caenorhabditis elegans, GI32565903, Length=301, Percent_Identity=56.8106312292359, Blast_Score=320, Evalue=7e-88, Organism=Caenorhabditis elegans, GI32565909, Length=84, Percent_Identity=55.952380952381, Blast_Score=106, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6323209, Length=378, Percent_Identity=59.2592592592593, Blast_Score=429, Evalue=1e-121, Organism=Saccharomyces cerevisiae, GI6320710, Length=379, Percent_Identity=58.5751978891821, Blast_Score=429, Evalue=1e-121, Organism=Drosophila melanogaster, GI45552159, Length=376, Percent_Identity=55.5851063829787, Blast_Score=393, Evalue=1e-109, Organism=Drosophila melanogaster, GI24580529, Length=376, Percent_Identity=55.5851063829787, Blast_Score=393, Evalue=1e-109, Organism=Drosophila melanogaster, GI24580537, Length=376, Percent_Identity=55.5851063829787, Blast_Score=393, Evalue=1e-109, Organism=Drosophila melanogaster, GI24580533, Length=376, Percent_Identity=55.5851063829787, Blast_Score=393, Evalue=1e-109, Organism=Drosophila melanogaster, GI24580535, Length=376, Percent_Identity=55.5851063829787, Blast_Score=393, Evalue=1e-109, Organism=Drosophila melanogaster, GI24580531, Length=376, Percent_Identity=55.5851063829787, Blast_Score=393, Evalue=1e-109, Organism=Drosophila melanogaster, GI24580527, Length=374, Percent_Identity=55.0802139037433, Blast_Score=387, Evalue=1e-108, Organism=Drosophila melanogaster, GI24580525, Length=374, Percent_Identity=55.0802139037433, Blast_Score=387, Evalue=1e-108, Organism=Drosophila melanogaster, GI24580541, Length=375, Percent_Identity=52.8, Blast_Score=365, Evalue=1e-101, Organism=Drosophila melanogaster, GI24580539, Length=119, Percent_Identity=54.6218487394958, Blast_Score=132, Evalue=4e-31,
Paralogues:
None
Copy number: 7,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022631 - InterPro: IPR022630 - InterPro: IPR022629 - InterPro: IPR022628 - InterPro: IPR002133 - InterPro: IPR022636 [H]
Pfam domain/function: PF02773 S-AdoMet_synt_C; PF02772 S-AdoMet_synt_M; PF00438 S-AdoMet_synt_N [H]
EC number: =2.5.1.6 [H]
Molecular weight: Translated: 42680; Mature: 42549
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: PS00376 ADOMET_SYNTHETASE_1 ; PS00377 ADOMET_SYNTHETASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANDYLFTSESVSEGHPDKVADQISDAILDAILTQDKYSRVAAETLCNTGLVVLAGEITT CCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEE TANIDYIQIARDTIRRIGYDNTDFGIDYKGCAVLVAYDKQSPDIAQGVDRAHDNNLDQGA ECCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCC GDQGLMFGYACDETPELMPLPIYLAHRLVERQANLRRDGRLSWLRPDAKSQVTVRYVDGK CCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEEECCC PHAIDTVVLSTQHAPDIDLPQLREAVIEEIIKPTLPAELIKGDIKFLVNPTGRFVIGGPQ CCEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCEEEEECCCCCEEEECCC GDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALI CCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE QVSYAIGVAEPTSVMVNTFGTGKVSDETITKLVREHFDLRPKGIVQMLDLLRPIYEKTAA EEEHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH YGHFGRAEPEFSWEATDKALVLAEAAGVAPAVAQPA HCCCCCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCC >Mature Secondary Structure ANDYLFTSESVSEGHPDKVADQISDAILDAILTQDKYSRVAAETLCNTGLVVLAGEITT CCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEE TANIDYIQIARDTIRRIGYDNTDFGIDYKGCAVLVAYDKQSPDIAQGVDRAHDNNLDQGA ECCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCC GDQGLMFGYACDETPELMPLPIYLAHRLVERQANLRRDGRLSWLRPDAKSQVTVRYVDGK CCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEEECCC PHAIDTVVLSTQHAPDIDLPQLREAVIEEIIKPTLPAELIKGDIKFLVNPTGRFVIGGPQ CCEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCEEEEECCCCCEEEECCC GDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALI CCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE QVSYAIGVAEPTSVMVNTFGTGKVSDETITKLVREHFDLRPKGIVQMLDLLRPIYEKTAA EEEHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH YGHFGRAEPEFSWEATDKALVLAEAAGVAPAVAQPA HCCCCCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA