Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238028901

Identifier: 238028901

GI number: 238028901

Start: 3827641

End: 3828411

Strand: Reverse

Name: 238028901

Synonym: bglu_1g33660

Alternate gene names: NA

Gene position: 3828411-3827641 (Counterclockwise)

Preceding gene: 238028903

Following gene: 238028897

Centisome position: 98.0

GC content: 70.04

Gene sequence:

>771_bases
ATGTCCCCACAGCATTCGGAGTTGATTCGCGCCCAGATCGACGCATTGCGCGAACACGGTTACGTGGTCGTGCCGGGGCT
GGTCGCGCCCGAGACTTGCGCCGCCTTGAAGGCGGTTGCCGAGCGCCAGCTGCGCGAGGCCGCCGAGCCGCTCGAATTCG
AGGCGGACCTGCGCTATCCGGGCGCGCCGCAGTCGAAGGACGCACCGGGCGGCCGCACCGTGCGCCGCCTGCTCGACGCC
TACCAGCGCGCGCCCGAGTTCGCCGCGCGTGCTACCGCGCCCGAGATCGCCGCCTGGCTGCGGGAGTACTTCGGTGAGGC
GGCGCTGCTTTCGCGCGCGCATCACAACTGCATGATGACGAAGCACCCGCGGTACGGCAGCCTGACCGGCTGGCACCGCG
ACTTTCGCTACTGGGCGTTCGAGCGCGCGGATCTCGTGTCGGTCTGGCTCGCGATCGGCGCGGAGACCGACGGCAACGGC
GCGCTGTGGCTCGTGCCCGGCTCGCACAAGGCCGAGCTCGGTGCCGACTGCTTCGACGAGGCGAAGTTCTTCCGCGGCGA
CCTGCCTGCCAACCGCGCGTTGATCGAGCGCGCGGTGTGCCCCGAACTCGGCCCCGGCGACGTGGTGTTCTTCCACTGCA
ACACGCTGCATTCGGCCGGCCAGAACCGCAGCGACCAGGTGAAGTTCTCGCTCGTCTACACCTATCACGGCGAGAGCAAC
CGGCCGGTGCCCGGCTCGCGCTCGGCGTCGAAGCCCGAGGTGAGGCTCTGA

Upstream 100 bases:

>100_bases
CGGAGCGCGATCCGTGCGCGGTCGTTGACAATGTCGGTTTCCGGATCGATCCCCGCCGTCTTACAATCGACGCATTCATA
AGAACGACATCGAGCCCGCC

Downstream 100 bases:

>100_bases
CGCGCGGCGGCGGATGCGGCGTCGCGGCCGACGGCCGTCAGCGCCGGCCGCCCGGCATCGCCAGGCCGATCAGGCCGGCC
AGCGTCGCGACCGCGCCGCC

Product: Phytanoyl-CoA dioxygenase family

Products: NA

Alternate protein names: Dioxygenase; Deoxygenase; L-Proline 4-Hydroxylase; Hypophosphite Dioxygenase; Potassium Channel Protein; Type I Secretion Membrane Fusion Protein HlyD; Phytanoyl-CoA Deoxygenase Family Protein; Phytanoyl-CoA Dioxygenase Family Protein; Phytanoyl-CoA Dioxygenase PhyH Family

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MSPQHSELIRAQIDALREHGYVVVPGLVAPETCAALKAVAERQLREAAEPLEFEADLRYPGAPQSKDAPGGRTVRRLLDA
YQRAPEFAARATAPEIAAWLREYFGEAALLSRAHHNCMMTKHPRYGSLTGWHRDFRYWAFERADLVSVWLAIGAETDGNG
ALWLVPGSHKAELGADCFDEAKFFRGDLPANRALIERAVCPELGPGDVVFFHCNTLHSAGQNRSDQVKFSLVYTYHGESN
RPVPGSRSASKPEVRL

Sequences:

>Translated_256_residues
MSPQHSELIRAQIDALREHGYVVVPGLVAPETCAALKAVAERQLREAAEPLEFEADLRYPGAPQSKDAPGGRTVRRLLDA
YQRAPEFAARATAPEIAAWLREYFGEAALLSRAHHNCMMTKHPRYGSLTGWHRDFRYWAFERADLVSVWLAIGAETDGNG
ALWLVPGSHKAELGADCFDEAKFFRGDLPANRALIERAVCPELGPGDVVFFHCNTLHSAGQNRSDQVKFSLVYTYHGESN
RPVPGSRSASKPEVRL
>Mature_255_residues
SPQHSELIRAQIDALREHGYVVVPGLVAPETCAALKAVAERQLREAAEPLEFEADLRYPGAPQSKDAPGGRTVRRLLDAY
QRAPEFAARATAPEIAAWLREYFGEAALLSRAHHNCMMTKHPRYGSLTGWHRDFRYWAFERADLVSVWLAIGAETDGNGA
LWLVPGSHKAELGADCFDEAKFFRGDLPANRALIERAVCPELGPGDVVFFHCNTLHSAGQNRSDQVKFSLVYTYHGESNR
PVPGSRSASKPEVRL

Specific function: Unknown

COG id: COG5285

COG function: function code Q; Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI5453884, Length=218, Percent_Identity=27.5229357798165, Blast_Score=80, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28378; Mature: 28247

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPQHSELIRAQIDALREHGYVVVPGLVAPETCAALKAVAERQLREAAEPLEFEADLRYP
CCCCHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCC
GAPQSKDAPGGRTVRRLLDAYQRAPEFAARATAPEIAAWLREYFGEAALLSRAHHNCMMT
CCCCCCCCCCHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHCCEEC
KHPRYGSLTGWHRDFRYWAFERADLVSVWLAIGAETDGNGALWLVPGSHKAELGADCFDE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHH
AKFFRGDLPANRALIERAVCPELGPGDVVFFHCNTLHSAGQNRSDQVKFSLVYTYHGESN
HHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCHHHCCCCCCCEEEEEEEEEEECCCC
RPVPGSRSASKPEVRL
CCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SPQHSELIRAQIDALREHGYVVVPGLVAPETCAALKAVAERQLREAAEPLEFEADLRYP
CCCHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCC
GAPQSKDAPGGRTVRRLLDAYQRAPEFAARATAPEIAAWLREYFGEAALLSRAHHNCMMT
CCCCCCCCCCHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHCCEEC
KHPRYGSLTGWHRDFRYWAFERADLVSVWLAIGAETDGNGALWLVPGSHKAELGADCFDE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHH
AKFFRGDLPANRALIERAVCPELGPGDVVFFHCNTLHSAGQNRSDQVKFSLVYTYHGESN
HHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCHHHCCCCCCCEEEEEEEEEEECCCC
RPVPGSRSASKPEVRL
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA