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The map label for this gene is ynfM [H]

Identifier: 238028898

GI number: 238028898

Start: 3824918

End: 3826189

Strand: Direct

Name: ynfM [H]

Synonym: bglu_1g33630

Alternate gene names: 238028898

Gene position: 3824918-3826189 (Clockwise)

Preceding gene: 238028895

Following gene: 238028899

Centisome position: 97.91

GC content: 72.48

Gene sequence:

>1272_bases
GTGAGCGCTTCACCCGGATCGCCGGAGGCGGGCCGCCGCCCCGCTCAATCCGAGCCGTCGGCCCCGTCACCGCCGCCCTA
TCTCGAACGCGGCACGCGCGGCTACTGGCGCGCGGCCGTCGCACTGTTGTTCGCCGGCTACGCCACTTTCTCGCTGCTCT
ATTGCGTGCAGCCGCTGCTGCCGGCATTTTCGGGCGCGTTCGAGGTGAGCCCCGCGCAGAGCAGCCTGTCGCTGTCGTTC
GCGACCGCCGCGCTGGCCGTCGCGATCTTCGTGGCCGGCTTCGTCTCCGAAGGCCTGAGCCGGCACCGGCTGATGACGGC
CTCGCTGACCGCCTCGTCGCTGTTCACGCTCGCGGCCGCGTTCGTGCCGCACTGGCACGAGCTGCTGGTGCTGCGCGCGC
TCACCGGGCTCGCGCTCGGCGGGGTGCCCGCCGTGGCGATGGCCTATCTCGCCGAGGAGGTGCATCCGGACGGGCTCGGG
CTCGCGATGGGGCTCTACGTGGGCGGCACCGCGATCGGCGGCATGGCCGGGCGCGTGATCACCGGCATGCTCGCCGAGTG
GTTCGGCTGGCGCATCGCGGTGGCCGGCATCGGCGTGCTGGGGCTGCTGTCGATGCTGGCGTTTCGCGCGCTGCTGCCCG
CCTCGCGCCATTTCACGCCGCGCCGCGGGCTCGGCCTCGCGCATCATCGCAGCGCGCTGGCGCGGCATCTGACCGGGCGC
CGCGAACTGCCGGCGCTGTTCCTGATGGGCTTCGTGCTGATGGGCAGCTTCGTCACGCTCTACAACTACATCGGCTACCG
GCTGCTCGCGCCGCCCTATGCGATGAACCAGGCCAGCATCGGCGCGATCTTCGTGGTCTATCTGGTCGGCGTGTTCGCCT
CGCCATGGTCGGGGCGGATGGCCGATTCGATCGGGCGCGGCCGCGTGCTGGTGATGAGCATCGCGATGATGGGCGCAGGC
GTCGCGCTGACGCTGCTCGCGCCGGTGGCGGCGATCGCCGCCGGCATCGCCTGCGTGACGTTCGGCTTCTTCGCCGGCCA
CTCGGTCGCGAGCGGCTGGGTCGGACGGCTTGCCATCGAGGGCAAGGGGCAGGCCGCCGCGCTGTACCTGCTCTCGTACT
ACGTCGGCTCGAGCGTGATCGGCTCGCTCGGCGGCCACTTCTGGAGCGCGTCGGGCTGGCCCGGCGTGGCGGCGCTGGTG
GCCGTGCTGCTCGCGGCCGGCTTCGTCACGGCGCGCTGGCTGCACGCGCGGGAACGCATCGGCGCGGCCTGA

Upstream 100 bases:

>100_bases
CAAGGCCGGCTCGGACGACGCGTCCGGACGACGCCCCGACGACGCGAGGCGGCCAACCGGCGTATCGTTGCGGTTTTCGT
TCGTTGCAGGGAGCCCCAGC

Downstream 100 bases:

>100_bases
GCCGGCGCGGCCCCGGAGCCGGCAGGCAGCCCGGTCGGCACCGCTAGCCGACAGGCTGGCACGAGCGCTTGCCGCGCACC
CCCGCCCCGCGCCAACGCGG

Product: major facilitator family transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 422

Protein sequence:

>423_residues
MSASPGSPEAGRRPAQSEPSAPSPPPYLERGTRGYWRAAVALLFAGYATFSLLYCVQPLLPAFSGAFEVSPAQSSLSLSF
ATAALAVAIFVAGFVSEGLSRHRLMTASLTASSLFTLAAAFVPHWHELLVLRALTGLALGGVPAVAMAYLAEEVHPDGLG
LAMGLYVGGTAIGGMAGRVITGMLAEWFGWRIAVAGIGVLGLLSMLAFRALLPASRHFTPRRGLGLAHHRSALARHLTGR
RELPALFLMGFVLMGSFVTLYNYIGYRLLAPPYAMNQASIGAIFVVYLVGVFASPWSGRMADSIGRGRVLVMSIAMMGAG
VALTLLAPVAAIAAGIACVTFGFFAGHSVASGWVGRLAIEGKGQAAALYLLSYYVGSSVIGSLGGHFWSASGWPGVAALV
AVLLAAGFVTARWLHARERIGAA

Sequences:

>Translated_423_residues
MSASPGSPEAGRRPAQSEPSAPSPPPYLERGTRGYWRAAVALLFAGYATFSLLYCVQPLLPAFSGAFEVSPAQSSLSLSF
ATAALAVAIFVAGFVSEGLSRHRLMTASLTASSLFTLAAAFVPHWHELLVLRALTGLALGGVPAVAMAYLAEEVHPDGLG
LAMGLYVGGTAIGGMAGRVITGMLAEWFGWRIAVAGIGVLGLLSMLAFRALLPASRHFTPRRGLGLAHHRSALARHLTGR
RELPALFLMGFVLMGSFVTLYNYIGYRLLAPPYAMNQASIGAIFVVYLVGVFASPWSGRMADSIGRGRVLVMSIAMMGAG
VALTLLAPVAAIAAGIACVTFGFFAGHSVASGWVGRLAIEGKGQAAALYLLSYYVGSSVIGSLGGHFWSASGWPGVAALV
AVLLAAGFVTARWLHARERIGAA
>Mature_422_residues
SASPGSPEAGRRPAQSEPSAPSPPPYLERGTRGYWRAAVALLFAGYATFSLLYCVQPLLPAFSGAFEVSPAQSSLSLSFA
TAALAVAIFVAGFVSEGLSRHRLMTASLTASSLFTLAAAFVPHWHELLVLRALTGLALGGVPAVAMAYLAEEVHPDGLGL
AMGLYVGGTAIGGMAGRVITGMLAEWFGWRIAVAGIGVLGLLSMLAFRALLPASRHFTPRRGLGLAHHRSALARHLTGRR
ELPALFLMGFVLMGSFVTLYNYIGYRLLAPPYAMNQASIGAIFVVYLVGVFASPWSGRMADSIGRGRVLVMSIAMMGAGV
ALTLLAPVAAIAAGIACVTFGFFAGHSVASGWVGRLAIEGKGQAAALYLLSYYVGSSVIGSLGGHFWSASGWPGVAALVA
VLLAAGFVTARWLHARERIGAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=402, Percent_Identity=45.771144278607, Blast_Score=340, Evalue=8e-95,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 43980; Mature: 43849

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASPGSPEAGRRPAQSEPSAPSPPPYLERGTRGYWRAAVALLFAGYATFSLLYCVQPLL
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
PAFSGAFEVSPAQSSLSLSFATAALAVAIFVAGFVSEGLSRHRLMTASLTASSLFTLAAA
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVPHWHELLVLRALTGLALGGVPAVAMAYLAEEVHPDGLGLAMGLYVGGTAIGGMAGRVI
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHH
TGMLAEWFGWRIAVAGIGVLGLLSMLAFRALLPASRHFTPRRGLGLAHHRSALARHLTGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHHHHHCCC
RELPALFLMGFVLMGSFVTLYNYIGYRLLAPPYAMNQASIGAIFVVYLVGVFASPWSGRM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHH
ADSIGRGRVLVMSIAMMGAGVALTLLAPVAAIAAGIACVTFGFFAGHSVASGWVGRLAIE
HHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHEEEEC
GKGQAAALYLLSYYVGSSVIGSLGGHFWSASGWPGVAALVAVLLAAGFVTARWLHARERI
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
GAA
CCC
>Mature Secondary Structure 
SASPGSPEAGRRPAQSEPSAPSPPPYLERGTRGYWRAAVALLFAGYATFSLLYCVQPLL
CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
PAFSGAFEVSPAQSSLSLSFATAALAVAIFVAGFVSEGLSRHRLMTASLTASSLFTLAAA
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVPHWHELLVLRALTGLALGGVPAVAMAYLAEEVHPDGLGLAMGLYVGGTAIGGMAGRVI
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHH
TGMLAEWFGWRIAVAGIGVLGLLSMLAFRALLPASRHFTPRRGLGLAHHRSALARHLTGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHHHHHCCC
RELPALFLMGFVLMGSFVTLYNYIGYRLLAPPYAMNQASIGAIFVVYLVGVFASPWSGRM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHH
ADSIGRGRVLVMSIAMMGAGVALTLLAPVAAIAAGIACVTFGFFAGHSVASGWVGRLAIE
HHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHEEEEC
GKGQAAALYLLSYYVGSSVIGSLGGHFWSASGWPGVAALVAVLLAAGFVTARWLHARERI
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
GAA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]