| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is lon2 [H]
Identifier: 238028873
GI number: 238028873
Start: 3797334
End: 3798314
Strand: Reverse
Name: lon2 [H]
Synonym: bglu_1g33380
Alternate gene names: 238028873
Gene position: 3798314-3797334 (Counterclockwise)
Preceding gene: 238028880
Following gene: 238028872
Centisome position: 97.23
GC content: 69.32
Gene sequence:
>981_bases ATGACGACGGCAATGGTGCGGCAGGAACTGGCGGTTGCGTCGTTCAGCCGCGTCTACGATCTGGAGCGGGTCGAGACGGC GCTGGGCGATCTGAACGAGGGGGCGAGCGAGGCGCTGCGCTCGACCTACGAGAAGATGCTGAAGACGGGCAACCTGCGCT TCTGCGTGAAGCCCACGCGCATGCCCGCGTTCGACGCGCTGGCCGAGTCGCTGCCGAACTTCTGCGGCCCGCTCGACGAC CTGCGCAAGCAGGTGGCGCTGTGCCTCGAGACGGAGGACCGGCTGGAACTGATGCCGATCCTGCTGCTCGGCGCGCCCGG CATCGGCAAGACGCACTTCGCGAAGGCGCTCGCGCAGATGCTCGGTACCGCCTACCACTACGTGCCGATGAGTTCGCTGA CGGCGGGCTGGGTGCTCTCTGGGGCGTCCTCGCAATGGAAGAACGCGAAGCCGGGCAAGGTGTTCGACGCGCTCGTGAAC GGCAGCTACGCGAACCCGGTGATCGTGATCGACGAGATCGACAAGGCCGGCAACGACGCGCAATACGATCCGCTCGGCGC GCTCTACGCGCTGCTCGAGCACGACACCGCGAGCGCGTTCGTCGACGAGTTCGCCGAGGTGCCGATCGACGCCGGCAACG TGATCTGGATCGCGACCGCGAACGACGCGAAGTCGATTCCCGAGCCGATCCTGAACCGCATGAACGTCTACGAGATTCCG GCGCCCGACGAGGCCGGCGCGCGCCGCATCGCGCAGGCGATCTACACGCAGATCCGCGAGGCGCACGCATGGGGCCTGCG CTTTCCCGAGCAGCTCGGCGAGGCGTCGCTCGCCGCGCTCGCGGCGGTGCCGCCGCGCACCATGCGGCGCGCGCTGCTGC ACGCCTTCGGCGCCGCGCGGCTGGACGGCCGCAACGCGGTCGAGCCGCGCGACATCCGTGCCGACGAGGGCATGCCCAAG CGGCGGCCGATCGGCTTCTGA
Upstream 100 bases:
>100_bases TTTTGTCTGGCCAACACTGGCATCGAGGAGTTTGATGTCGCGCATCCGTATGAGGCGCGGCGGGGTTTCCACGAAGCGGC AGGCGAGCAGGAGGTGTGTT
Downstream 100 bases:
>100_bases CGCGCCGCCCGCGCCCCGCCCCGGCGCGCGGCGGGGCGCGGTGTTTTCTTATGCTCGGGATTCGGGGACGCAGGCTCGCG CGGGCGGCGTTATGCTTGGC
Product: ATP-dependent Lon protease
Products: NA
Alternate protein names: ATP-dependent protease La 2 [H]
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MTTAMVRQELAVASFSRVYDLERVETALGDLNEGASEALRSTYEKMLKTGNLRFCVKPTRMPAFDALAESLPNFCGPLDD LRKQVALCLETEDRLELMPILLLGAPGIGKTHFAKALAQMLGTAYHYVPMSSLTAGWVLSGASSQWKNAKPGKVFDALVN GSYANPVIVIDEIDKAGNDAQYDPLGALYALLEHDTASAFVDEFAEVPIDAGNVIWIATANDAKSIPEPILNRMNVYEIP APDEAGARRIAQAIYTQIREAHAWGLRFPEQLGEASLAALAAVPPRTMRRALLHAFGAARLDGRNAVEPRDIRADEGMPK RRPIGF
Sequences:
>Translated_326_residues MTTAMVRQELAVASFSRVYDLERVETALGDLNEGASEALRSTYEKMLKTGNLRFCVKPTRMPAFDALAESLPNFCGPLDD LRKQVALCLETEDRLELMPILLLGAPGIGKTHFAKALAQMLGTAYHYVPMSSLTAGWVLSGASSQWKNAKPGKVFDALVN GSYANPVIVIDEIDKAGNDAQYDPLGALYALLEHDTASAFVDEFAEVPIDAGNVIWIATANDAKSIPEPILNRMNVYEIP APDEAGARRIAQAIYTQIREAHAWGLRFPEQLGEASLAALAAVPPRTMRRALLHAFGAARLDGRNAVEPRDIRADEGMPK RRPIGF >Mature_325_residues TTAMVRQELAVASFSRVYDLERVETALGDLNEGASEALRSTYEKMLKTGNLRFCVKPTRMPAFDALAESLPNFCGPLDDL RKQVALCLETEDRLELMPILLLGAPGIGKTHFAKALAQMLGTAYHYVPMSSLTAGWVLSGASSQWKNAKPGKVFDALVNG SYANPVIVIDEIDKAGNDAQYDPLGALYALLEHDTASAFVDEFAEVPIDAGNVIWIATANDAKSIPEPILNRMNVYEIPA PDEAGARRIAQAIYTQIREAHAWGLRFPEQLGEASLAALAAVPPRTMRRALLHAFGAARLDGRNAVEPRDIRADEGMPKR RPIGF
Specific function: ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced
COG id: COG0466
COG function: function code O; ATP-dependent Lon protease, bacterial type
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Lon domain [H]
Homologues:
Organism=Homo sapiens, GI21396489, Length=140, Percent_Identity=35, Blast_Score=102, Evalue=7e-22, Organism=Homo sapiens, GI31377667, Length=144, Percent_Identity=32.6388888888889, Blast_Score=100, Evalue=2e-21, Organism=Escherichia coli, GI1786643, Length=155, Percent_Identity=32.258064516129, Blast_Score=91, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17556486, Length=166, Percent_Identity=30.7228915662651, Blast_Score=94, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17505831, Length=137, Percent_Identity=34.3065693430657, Blast_Score=93, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6319449, Length=141, Percent_Identity=35.4609929078014, Blast_Score=100, Evalue=3e-22, Organism=Drosophila melanogaster, GI24666867, Length=136, Percent_Identity=36.7647058823529, Blast_Score=102, Evalue=2e-22, Organism=Drosophila melanogaster, GI221513036, Length=136, Percent_Identity=36.7647058823529, Blast_Score=102, Evalue=2e-22,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR008269 - InterPro: IPR004815 - InterPro: IPR003111 - InterPro: IPR008268 - InterPro: IPR001984 - InterPro: IPR015947 - InterPro: IPR020568 [H]
Pfam domain/function: PF00004 AAA; PF02190 LON; PF05362 Lon_C [H]
EC number: =3.4.21.53 [H]
Molecular weight: Translated: 35521; Mature: 35390
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTAMVRQELAVASFSRVYDLERVETALGDLNEGASEALRSTYEKMLKTGNLRFCVKPTR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCC MPAFDALAESLPNFCGPLDDLRKQVALCLETEDRLELMPILLLGAPGIGKTHFAKALAQM CCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHEECCCCCCHHHHHHHHHHH LGTAYHYVPMSSLTAGWVLSGASSQWKNAKPGKVFDALVNGSYANPVIVIDEIDKAGNDA HHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEECCCCCCCCC QYDPLGALYALLEHDTASAFVDEFAEVPIDAGNVIWIATANDAKSIPEPILNRMNVYEIP CCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHCCCHHHHHCCCEEECC APDEAGARRIAQAIYTQIREAHAWGLRFPEQLGEASLAALAAVPPRTMRRALLHAFGAAR CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHH LDGRNAVEPRDIRADEGMPKRRPIGF CCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TTAMVRQELAVASFSRVYDLERVETALGDLNEGASEALRSTYEKMLKTGNLRFCVKPTR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCC MPAFDALAESLPNFCGPLDDLRKQVALCLETEDRLELMPILLLGAPGIGKTHFAKALAQM CCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHEECCCCCCHHHHHHHHHHH LGTAYHYVPMSSLTAGWVLSGASSQWKNAKPGKVFDALVNGSYANPVIVIDEIDKAGNDA HHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEECCCCCCCCC QYDPLGALYALLEHDTASAFVDEFAEVPIDAGNVIWIATANDAKSIPEPILNRMNVYEIP CCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHCCCHHHHHCCCEEECC APDEAGARRIAQAIYTQIREAHAWGLRFPEQLGEASLAALAAVPPRTMRRALLHAFGAAR CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHH LDGRNAVEPRDIRADEGMPKRRPIGF CCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA