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The map label for this gene is dppC [H]

Identifier: 238028868

GI number: 238028868

Start: 3791336

End: 3792247

Strand: Reverse

Name: dppC [H]

Synonym: bglu_1g33330

Alternate gene names: 238028868

Gene position: 3792247-3791336 (Counterclockwise)

Preceding gene: 238028869

Following gene: 238028867

Centisome position: 97.08

GC content: 71.82

Gene sequence:

>912_bases
ATGAGCGAACTCCCCGATGTGCTGCCGGCGGCCCGCGCCGGCGGCCGCGCGCTCGCGCTGCAGGAATTCTGGCGCAACTT
CTCGCGCAACCGCGGCGCCGTGGGCGCCGGCCTGATCGTGCTGCTGCTGGTGCTGGTGGCGATCTTCGCGCCGCTCGTCG
CGCCGCACAGCCCGATCGAGCAGTACCGCGACTTCGTCAAGATCCCGCCCGCCTGGCTCGACGGCGGCAACTGGCGCTTC
GTGCTCGGCACCGACGAGGCCGGCCGCGACATCCTCTCGCGGCTGATGTACGGCGCGCGCCTGTCGTTCTGGATCGGCCT
GGTGTCGGTGGTGCTGGCGCTGCTGCCCGGCATCGTGCTCGGGCTGGTCGCCGCGTTCTTCCAGCGCTGGGCCGACACGC
CCGTGATGCGCGTGATGGACGTGCTGCTCGCGCTGCCCTCGCTGCTGCTGGCGGTGGCGGTGGTGGCCATCATCGGCCCG
GGCCTGACCAACGCCATGTTCGCGATCGCGATCGTGGCGCTGCCCGGCTACGTGCGCCTCACGCGCGCCTCGGCGCTCGG
CGAGCTGCAGAAGGAATACGTCACGGCCTCGCGCGTGGCGGGCGCCGGCACGCTGCGGCTGATGTTCTCGCAGGTGCTGC
CGAACTGCACCGCGCCGCTGATCGTGCAGGCCACGCTCGGCTTCTCGTCGGCGATCCTCGACGCGGCCGCGCTCGGCTTC
CTCGGGCTCGGCGTGCAGCCGCCCGCGGCCGAGTGGGGCGCGATGCTGGCCAGCGCGCGTGACTACATCGACAACGCGTG
GTGGATCGTCACCATGCCGGGCCTCGCGATCCTGATCTCGGTGCTGGCGATCAACCTGCTCGGCGACGGCCTGCGCGACG
CGCTCGACCCGAAACTGAAACGGATGGCCTGA

Upstream 100 bases:

>100_bases
GGCATCCTGCTGATCGCCACGCTCGTGATCATCGTCAATCTCGTCGTCGATCTGCTCTACGGCGTGCTCAACCCCCGCAT
CCGCCATACGAGGTGACCCG

Downstream 100 bases:

>100_bases
CCATGGACACTCTTCTGACCATCCGCAATCTGGCGGTCAATTTCAACGGCCTCGCCGCCGTCGACCGGATCGACCTGAGC
GTCGCGCCGGGCGAGGTGGT

Product: Oligopeptide/dipeptide ABC transporter inner membrane subunit

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 302

Protein sequence:

>303_residues
MSELPDVLPAARAGGRALALQEFWRNFSRNRGAVGAGLIVLLLVLVAIFAPLVAPHSPIEQYRDFVKIPPAWLDGGNWRF
VLGTDEAGRDILSRLMYGARLSFWIGLVSVVLALLPGIVLGLVAAFFQRWADTPVMRVMDVLLALPSLLLAVAVVAIIGP
GLTNAMFAIAIVALPGYVRLTRASALGELQKEYVTASRVAGAGTLRLMFSQVLPNCTAPLIVQATLGFSSAILDAAALGF
LGLGVQPPAAEWGAMLASARDYIDNAWWIVTMPGLAILISVLAINLLGDGLRDALDPKLKRMA

Sequences:

>Translated_303_residues
MSELPDVLPAARAGGRALALQEFWRNFSRNRGAVGAGLIVLLLVLVAIFAPLVAPHSPIEQYRDFVKIPPAWLDGGNWRF
VLGTDEAGRDILSRLMYGARLSFWIGLVSVVLALLPGIVLGLVAAFFQRWADTPVMRVMDVLLALPSLLLAVAVVAIIGP
GLTNAMFAIAIVALPGYVRLTRASALGELQKEYVTASRVAGAGTLRLMFSQVLPNCTAPLIVQATLGFSSAILDAAALGF
LGLGVQPPAAEWGAMLASARDYIDNAWWIVTMPGLAILISVLAINLLGDGLRDALDPKLKRMA
>Mature_302_residues
SELPDVLPAARAGGRALALQEFWRNFSRNRGAVGAGLIVLLLVLVAIFAPLVAPHSPIEQYRDFVKIPPAWLDGGNWRFV
LGTDEAGRDILSRLMYGARLSFWIGLVSVVLALLPGIVLGLVAAFFQRWADTPVMRVMDVLLALPSLLLAVAVVAIIGPG
LTNAMFAIAIVALPGYVRLTRASALGELQKEYVTASRVAGAGTLRLMFSQVLPNCTAPLIVQATLGFSSAILDAAALGFL
GLGVQPPAAEWGAMLASARDYIDNAWWIVTMPGLAILISVLAINLLGDGLRDALDPKLKRMA

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789964, Length=282, Percent_Identity=60.2836879432624, Blast_Score=305, Evalue=2e-84,
Organism=Escherichia coli, GI1787054, Length=280, Percent_Identity=42.5, Blast_Score=224, Evalue=6e-60,
Organism=Escherichia coli, GI1787760, Length=265, Percent_Identity=45.6603773584906, Blast_Score=217, Evalue=9e-58,
Organism=Escherichia coli, GI1787549, Length=281, Percent_Identity=44.4839857651246, Blast_Score=200, Evalue=9e-53,
Organism=Escherichia coli, GI1789889, Length=226, Percent_Identity=41.1504424778761, Blast_Score=150, Evalue=1e-37,
Organism=Escherichia coli, GI1787498, Length=284, Percent_Identity=29.9295774647887, Blast_Score=127, Evalue=8e-31,
Organism=Escherichia coli, GI1788505, Length=226, Percent_Identity=27.4336283185841, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32245; Mature: 32114

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELPDVLPAARAGGRALALQEFWRNFSRNRGAVGAGLIVLLLVLVAIFAPLVAPHSPIE
CCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHH
QYRDFVKIPPAWLDGGNWRFVLGTDEAGRDILSRLMYGARLSFWIGLVSVVLALLPGIVL
HHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLVAAFFQRWADTPVMRVMDVLLALPSLLLAVAVVAIIGPGLTNAMFAIAIVALPGYVRL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHH
TRASALGELQKEYVTASRVAGAGTLRLMFSQVLPNCTAPLIVQATLGFSSAILDAAALGF
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHCHHHHHHHHHHHHH
LGLGVQPPAAEWGAMLASARDYIDNAWWIVTMPGLAILISVLAINLLGDGLRDALDPKLK
HHCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCHHHH
RMA
HCC
>Mature Secondary Structure 
SELPDVLPAARAGGRALALQEFWRNFSRNRGAVGAGLIVLLLVLVAIFAPLVAPHSPIE
CCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHH
QYRDFVKIPPAWLDGGNWRFVLGTDEAGRDILSRLMYGARLSFWIGLVSVVLALLPGIVL
HHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLVAAFFQRWADTPVMRVMDVLLALPSLLLAVAVVAIIGPGLTNAMFAIAIVALPGYVRL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHH
TRASALGELQKEYVTASRVAGAGTLRLMFSQVLPNCTAPLIVQATLGFSSAILDAAALGF
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHCHHHHHHHHHHHHH
LGLGVQPPAAEWGAMLASARDYIDNAWWIVTMPGLAILISVLAINLLGDGLRDALDPKLK
HHCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCHHHH
RMA
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800; 8550458 [H]