| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is sspA [C]
Identifier: 238028857
GI number: 238028857
Start: 3779962
End: 3780594
Strand: Reverse
Name: sspA [C]
Synonym: bglu_1g33220
Alternate gene names: 238028857
Gene position: 3780594-3779962 (Counterclockwise)
Preceding gene: 238028858
Following gene: 238028856
Centisome position: 96.78
GC content: 71.72
Gene sequence:
>633_bases ATGCGATTGATCATTGGTGACAAGAGCTATTCCTCGTGGTCGATGCGGCCCTGGGTGCTGATGCGGCACTTCGGGATACC GTTCGAGGAGACCCTGATCGAGCTGCGCGCGCCCGACACCGAGGCGCGCATCCTGGCACTCTCGCCGTCGGGCCGCGTGC CCTGCCTGATCGACGAGGCCGGCCATGCCGTCTGGGATTCGCTGGCGATCGCCGAGACGCTCGCCGAGCGGTTTCCCGCG CAGCCGATGTGGCCGGTCGAGCCGGTGGCGCGCGCGCGGGCGCGCAGCGTCTCGGCCGAGATGCATGCCGGGTTCGCCGC GGTGCGCGCCGAGATGCCGTTCAGCCTGCGCGCGCCGCAGCCCGGGCGCGAGCTGTCGCCGGCCGCGCTGGCCCAGGTCG CGCGCATCGAGGCGATCTGGCGCGACTGCCTCGCGCGCTCGGGCGGCCCGTTCCTGTTCGGCGCGTTCACGATTGCCGAT GCGATGTACGCGCCGGTGGTGATGCGCTTCGTCTGCTACGCGCCGGTGCTCTGCGAGGTCTCGGCCGCCTATGTCGAGCG CATGCTCGCGCTGCCGGCGGTCGCGGCCTGGAACGAGGGCGCGCGCCGCGAGACGCGCATGGTCGAATACTGA
Upstream 100 bases:
>100_bases CCGAGTCGGCTCGCCCCGCGGTGCGGGCACCCGCGCCGGGCGCACCCGTCGCGCGGCCGGCGCGGCGCGCTTCCCTTCGA CTGGACGACAAGACGTGACG
Downstream 100 bases:
>100_bases GAAGGCCGGGAGGCAAGCGCATGAACATCTATGTGGTAGGCGGTGCGATCCGCGATGCCCTGCTCGGCCTGCCGGTGCAG GACCGCGACTACGTGGTGGT
Product: glutathione S-transferase, N-terminal domain-containing protein
Products: NA
Alternate protein names: Glutathione S-Transferase Domain-Containing Protein; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase Family Protein; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase-Like; Glutathione-S-Transferase Protein; Glutathione S-Transferase Protein; Glutathione S-Transferase N-Terminal Domain Protein; Glutathione S-Transferase Domain; Glutathione S-Transferase N-Terminal Domain-Containing; Maleylacetoacetate Isomerase; Stringent Starvation Protein A; GSH-Dependent Dehydroascorbate Reductase; Glutathione S-Transferase N-Terminal; Glutathione-S-Tranferase Family Protein
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MRLIIGDKSYSSWSMRPWVLMRHFGIPFEETLIELRAPDTEARILALSPSGRVPCLIDEAGHAVWDSLAIAETLAERFPA QPMWPVEPVARARARSVSAEMHAGFAAVRAEMPFSLRAPQPGRELSPAALAQVARIEAIWRDCLARSGGPFLFGAFTIAD AMYAPVVMRFVCYAPVLCEVSAAYVERMLALPAVAAWNEGARRETRMVEY
Sequences:
>Translated_210_residues MRLIIGDKSYSSWSMRPWVLMRHFGIPFEETLIELRAPDTEARILALSPSGRVPCLIDEAGHAVWDSLAIAETLAERFPA QPMWPVEPVARARARSVSAEMHAGFAAVRAEMPFSLRAPQPGRELSPAALAQVARIEAIWRDCLARSGGPFLFGAFTIAD AMYAPVVMRFVCYAPVLCEVSAAYVERMLALPAVAAWNEGARRETRMVEY >Mature_210_residues MRLIIGDKSYSSWSMRPWVLMRHFGIPFEETLIELRAPDTEARILALSPSGRVPCLIDEAGHAVWDSLAIAETLAERFPA QPMWPVEPVARARARSVSAEMHAGFAAVRAEMPFSLRAPQPGRELSPAALAQVARIEAIWRDCLARSGGPFLFGAFTIAD AMYAPVVMRFVCYAPVLCEVSAAYVERMLALPAVAAWNEGARRETRMVEY
Specific function: Forms An Equimolar Complex With The RNA Polymerase Holoenzyme (Rnap) But Not With The Core Enzyme. It Is Synthesized Predominantly When Cells Are Exposed To Amino Acid Starvation, At Which Time It Accounts For Over 50% Of The Total Protein Synthesized. It
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1982 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23263; Mature: 23263
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLIIGDKSYSSWSMRPWVLMRHFGIPFEETLIELRAPDTEARILALSPSGRVPCLIDEA CEEEECCCCCCCCCCCHHHHHHHCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCEEEECC GHAVWDSLAIAETLAERFPAQPMWPVEPVARARARSVSAEMHAGFAAVRAEMPFSLRAPQ CHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCC PGRELSPAALAQVARIEAIWRDCLARSGGPFLFGAFTIADAMYAPVVMRFVCYAPVLCEV CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH SAAYVERMLALPAVAAWNEGARRETRMVEY HHHHHHHHHHHHHHHHCCCCCHHHHHCCCC >Mature Secondary Structure MRLIIGDKSYSSWSMRPWVLMRHFGIPFEETLIELRAPDTEARILALSPSGRVPCLIDEA CEEEECCCCCCCCCCCHHHHHHHCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCEEEECC GHAVWDSLAIAETLAERFPAQPMWPVEPVARARARSVSAEMHAGFAAVRAEMPFSLRAPQ CHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCC PGRELSPAALAQVARIEAIWRDCLARSGGPFLFGAFTIADAMYAPVVMRFVCYAPVLCEV CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH SAAYVERMLALPAVAAWNEGARRETRMVEY HHHHHHHHHHHHHHHHCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA