| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is flgL [H]
Identifier: 238028841
GI number: 238028841
Start: 3763833
End: 3765062
Strand: Reverse
Name: flgL [H]
Synonym: bglu_1g33060
Alternate gene names: 238028841
Gene position: 3765062-3763833 (Counterclockwise)
Preceding gene: 238028842
Following gene: 238028840
Centisome position: 96.38
GC content: 68.86
Gene sequence:
>1230_bases ATGCGCATCTCGACCTCGCAGTTCTATACCCAGAACATCGAGCTGATGAACAATCAGCAGTCGCAGCTCTCGGAGCTCTA TCAGCAGGTCGCGAGCGGCAACACGCTGCTCACGGCCGCCGACGATCCGCTCGGCGCGGCCCAGGCGGTGCAGCTCTCGG CCTCCTCGGCCACGCTCGCGCAGTACTCGTCGAACCAGTCGTCGGCGCTGTCCTCGCTGCAGCTCGAGGACAAGACGCTG AGCAGCGTGACGAACGTGCTGAACGCGGTGATCCCGTCGCTGTCGGGCGCCATCAACGGCACGCTGTCGGACAGCGACCG CTCGGCGCTCGCCGCCCAGCTGCAAGGCCAGCGCGACACGCTGCTGCAGCTCGCCAACACCACCGACGGCACCGGCAACT ACCTGTTCGCGGGCCTGCAGAGCGGCAACCAGCCGTTCACGAACTCGCCCTCGGGCGGCGTGATGTTCTCGGGCGACACC GGCCAGCGCACGGTGCAGCTCTCCGATTCGGTCAGCGTGGCGATCGGCGACAGCGGCGCGCGCGTGTTCACCTCGGTGCC CGCGCTCGGCAGCCTCTCGGTGCCGGCCAGCAACCCGAGCAACACCGGCACCGGCACGATCGGCGTGATCACCGGCGGCA CCCCCGGCGACCCGACCAACAACCACGCGTTCACGGTCACGTTCGGCGGCACCACCGGCGCGCCCACCTACACGGTCACC GACAATGCGACCACGCCGCCCACGGTCGGCACCGCGCAGACCTACACGGCGGGCAGCGCGATCAGCATCGGCAGCCAGAG CATGATCATCTCGGGCAACCCGGCGCCGGGCGACAGCTTCACGCTGACGCCGGCCACCCAGGCGGGCGGCGACATGATCG GCGCGCTCGATGCCGCGATCGCGGCGCTCAAGCAGCCGGTGGGCAGCGGCGCGGCGGCCGGCGCCACGCTCAACAACGCG CTGAGCACCGCGCTGACCAAGATGCAGAACGCGGTGGCCAACGTCACCACGGTGCAGGCCTCGGTGGGCGGCCGCGAGCA GGAGGTGAAGTCGATGCAGACCATCACCAGCACCAACTCGCTGCAGATCACCAACAGCCTGACCGACCTGACGCAGGCCA ACATGCCGGCCGCGATCACGCAGCTGCTGCAGGTGCAGAATTCGCTGACCGCGGCGCAGCAGGCATTCTCGAAGGTGCAG GGCCTGTCGCTGTTCCAGTATCTGAACTGA
Upstream 100 bases:
>100_bases ACCAGCAGATGTACCAGGCGAACGCGAAGGTGATCCAGACCGCCTCGACGCTGTTCAGCACGCTGCTCGGCATCTTCAAC TGACGACGGAATCGATCATC
Downstream 100 bases:
>100_bases TCCGGCACCGCCGGGCGTGAACGCGGCGCGGGGCGGACGTCCCGCCCCGCGCCGCCTCGCTCGTCTGCGGCGCCGCTCGC CGCTCCCCTCGCCGCCCGCG
Product: flagellar hook-associated protein FlgL
Products: NA
Alternate protein names: HAP3; Hook-filament junction protein [H]
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MRISTSQFYTQNIELMNNQQSQLSELYQQVASGNTLLTAADDPLGAAQAVQLSASSATLAQYSSNQSSALSSLQLEDKTL SSVTNVLNAVIPSLSGAINGTLSDSDRSALAAQLQGQRDTLLQLANTTDGTGNYLFAGLQSGNQPFTNSPSGGVMFSGDT GQRTVQLSDSVSVAIGDSGARVFTSVPALGSLSVPASNPSNTGTGTIGVITGGTPGDPTNNHAFTVTFGGTTGAPTYTVT DNATTPPTVGTAQTYTAGSAISIGSQSMIISGNPAPGDSFTLTPATQAGGDMIGALDAAIAALKQPVGSGAAAGATLNNA LSTALTKMQNAVANVTTVQASVGGREQEVKSMQTITSTNSLQITNSLTDLTQANMPAAITQLLQVQNSLTAAQQAFSKVQ GLSLFQYLN
Sequences:
>Translated_409_residues MRISTSQFYTQNIELMNNQQSQLSELYQQVASGNTLLTAADDPLGAAQAVQLSASSATLAQYSSNQSSALSSLQLEDKTL SSVTNVLNAVIPSLSGAINGTLSDSDRSALAAQLQGQRDTLLQLANTTDGTGNYLFAGLQSGNQPFTNSPSGGVMFSGDT GQRTVQLSDSVSVAIGDSGARVFTSVPALGSLSVPASNPSNTGTGTIGVITGGTPGDPTNNHAFTVTFGGTTGAPTYTVT DNATTPPTVGTAQTYTAGSAISIGSQSMIISGNPAPGDSFTLTPATQAGGDMIGALDAAIAALKQPVGSGAAAGATLNNA LSTALTKMQNAVANVTTVQASVGGREQEVKSMQTITSTNSLQITNSLTDLTQANMPAAITQLLQVQNSLTAAQQAFSKVQ GLSLFQYLN >Mature_409_residues MRISTSQFYTQNIELMNNQQSQLSELYQQVASGNTLLTAADDPLGAAQAVQLSASSATLAQYSSNQSSALSSLQLEDKTL SSVTNVLNAVIPSLSGAINGTLSDSDRSALAAQLQGQRDTLLQLANTTDGTGNYLFAGLQSGNQPFTNSPSGGVMFSGDT GQRTVQLSDSVSVAIGDSGARVFTSVPALGSLSVPASNPSNTGTGTIGVITGGTPGDPTNNHAFTVTFGGTTGAPTYTVT DNATTPPTVGTAQTYTAGSAISIGSQSMIISGNPAPGDSFTLTPATQAGGDMIGALDAAIAALKQPVGSGAAAGATLNNA LSTALTKMQNAVANVTTVQASVGGREQEVKSMQTITSTNSLQITNSLTDLTQANMPAAITQLLQVQNSLTAAQQAFSKVQ GLSLFQYLN
Specific function: Unknown
COG id: COG1344
COG function: function code N; Flagellin and related hook-associated proteins
Gene ontology:
Cell location: Secreted. Bacterial flagellum [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial flagellin family [H]
Homologues:
Organism=Escherichia coli, GI1787324, Length=186, Percent_Identity=38.1720430107527, Blast_Score=123, Evalue=2e-29,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013384 - InterPro: IPR001029 [H]
Pfam domain/function: PF00669 Flagellin_N [H]
EC number: NA
Molecular weight: Translated: 41362; Mature: 41362
Theoretical pI: Translated: 4.09; Mature: 4.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRISTSQFYTQNIELMNNQQSQLSELYQQVASGNTLLTAADDPLGAAQAVQLSASSATLA CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEECCCCHHHH QYSSNQSSALSSLQLEDKTLSSVTNVLNAVIPSLSGAINGTLSDSDRSALAAQLQGQRDT HHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHH LLQLANTTDGTGNYLFAGLQSGNQPFTNSPSGGVMFSGDTGQRTVQLSDSVSVAIGDSGA HHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEECCCEEEEECCCCC RVFTSVPALGSLSVPASNPSNTGTGTIGVITGGTPGDPTNNHAFTVTFGGTTGAPTYTVT EEEEECCCCCCEECCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEE DNATTPPTVGTAQTYTAGSAISIGSQSMIISGNPAPGDSFTLTPATQAGGDMIGALDAAI CCCCCCCCCCCCCEECCCCEEEECCCEEEEECCCCCCCCEEECCCCCCCCCHHHHHHHHH AALKQPVGSGAAAGATLNNALSTALTKMQNAVANVTTVQASVGGREQEVKSMQTITSTNS HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHCCCC LQITNSLTDLTQANMPAAITQLLQVQNSLTAAQQAFSKVQGLSLFQYLN EEEECHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRISTSQFYTQNIELMNNQQSQLSELYQQVASGNTLLTAADDPLGAAQAVQLSASSATLA CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEECCCCHHHH QYSSNQSSALSSLQLEDKTLSSVTNVLNAVIPSLSGAINGTLSDSDRSALAAQLQGQRDT HHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHH LLQLANTTDGTGNYLFAGLQSGNQPFTNSPSGGVMFSGDTGQRTVQLSDSVSVAIGDSGA HHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEECCCEEEEECCCCC RVFTSVPALGSLSVPASNPSNTGTGTIGVITGGTPGDPTNNHAFTVTFGGTTGAPTYTVT EEEEECCCCCCEECCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEE DNATTPPTVGTAQTYTAGSAISIGSQSMIISGNPAPGDSFTLTPATQAGGDMIGALDAAI CCCCCCCCCCCCCEECCCCEEEECCCEEEEECCCCCCCCEEECCCCCCCCCHHHHHHHHH AALKQPVGSGAAAGATLNNALSTALTKMQNAVANVTTVQASVGGREQEVKSMQTITSTNS HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHCCCC LQITNSLTDLTQANMPAAITQLLQVQNSLTAAQQAFSKVQGLSLFQYLN EEEECHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2193164; 11677609 [H]