| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028838
Identifier: 238028838
GI number: 238028838
Start: 3760561
End: 3761145
Strand: Reverse
Name: 238028838
Synonym: bglu_1g33030
Alternate gene names: NA
Gene position: 3761145-3760561 (Counterclockwise)
Preceding gene: 238028840
Following gene: 238028837
Centisome position: 96.28
GC content: 75.21
Gene sequence:
>585_bases ATGTCATCTCCCCTCACGCATGCCGAGGCGCGCCGCGCGGTCGGCATCGGCGAGCTGTTTGTCGGCTTTCTCGGGCTCGG GCTCGTGTCGTTCGGCGGCGCGCTGCCGTTCGCGCGCCGCGCCCTGGTGGAGGAGCGCCGCTGGCTCACGCCCGAGGAGT TCACCGATCTGCTCGGCCTCTGCCAGTTCCTGCCGGGCGGCAACGTGATCAACCTGTCGGTGGCCGTGGGAATGCGCTTT CGCGGCGTGCCGGGCGCGCTCGCCGGGCTGCTCGGGCTGATCGCGGGGCCGACGCTGGTGGTGGTCGGGCTCGGCGTGAT CTACGCGAGGACGCAGGGCGACCCGCGCGTGCAGCACCTGTTCGGCGGGCTCGCCGCGGCCGCGGCCGGCCTCCTGATCG CGATGGCGGTGAAGGTCGCGCGGCCGCTGCGGCAGGCGCCGGCCGCGGCCGGCGTGGCGCTGCTCGCGTTCGCGGCGATC GCCGTGGCGCGGCTGCCGCTGCTCGCCACCATGCTGGTGCTCACGCCGCTGAGCATCTGGCTCGCCTCGCGCGCACGCAC GCTGCCCGCCGGAGGCCGGCGATGA
Upstream 100 bases:
>100_bases CATGTGAGTTTAGCTCACAAGGCGCGCGCCGAAAAATCGTTTTGCCGGCGTCCCCGACCGGCGTAGTCTCGGCGCATCGG CCACTTCACCAAGGATTTCC
Downstream 100 bases:
>100_bases ACGGCACGCTCGTCGCGCTGGCCGCGATCTTCTCGCAACTGTCGCTGCTCGCGTTCGGCGGCGGCAACACGATCCTGCCC GAGATGCAGCGGCAGGTGGT
Product: chromate transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MSSPLTHAEARRAVGIGELFVGFLGLGLVSFGGALPFARRALVEERRWLTPEEFTDLLGLCQFLPGGNVINLSVAVGMRF RGVPGALAGLLGLIAGPTLVVVGLGVIYARTQGDPRVQHLFGGLAAAAAGLLIAMAVKVARPLRQAPAAAGVALLAFAAI AVARLPLLATMLVLTPLSIWLASRARTLPAGGRR
Sequences:
>Translated_194_residues MSSPLTHAEARRAVGIGELFVGFLGLGLVSFGGALPFARRALVEERRWLTPEEFTDLLGLCQFLPGGNVINLSVAVGMRF RGVPGALAGLLGLIAGPTLVVVGLGVIYARTQGDPRVQHLFGGLAAAAAGLLIAMAVKVARPLRQAPAAAGVALLAFAAI AVARLPLLATMLVLTPLSIWLASRARTLPAGGRR >Mature_193_residues SSPLTHAEARRAVGIGELFVGFLGLGLVSFGGALPFARRALVEERRWLTPEEFTDLLGLCQFLPGGNVINLSVAVGMRFR GVPGALAGLLGLIAGPTLVVVGLGVIYARTQGDPRVQHLFGGLAAAAAGLLIAMAVKVARPLRQAPAAAGVALLAFAAIA VARLPLLATMLVLTPLSIWLASRARTLPAGGRR
Specific function: Unknown
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003370 - InterPro: IPR014047 [H]
Pfam domain/function: PF02417 Chromate_transp [H]
EC number: NA
Molecular weight: Translated: 20002; Mature: 19871
Theoretical pI: Translated: 12.24; Mature: 12.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSPLTHAEARRAVGIGELFVGFLGLGLVSFGGALPFARRALVEERRWLTPEEFTDLLGL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHH CQFLPGGNVINLSVAVGMRFRGVPGALAGLLGLIAGPTLVVVGLGVIYARTQGDPRVQHL HHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH FGGLAAAAAGLLIAMAVKVARPLRQAPAAAGVALLAFAAIAVARLPLLATMLVLTPLSIW HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LASRARTLPAGGRR HHHHHHCCCCCCCC >Mature Secondary Structure SSPLTHAEARRAVGIGELFVGFLGLGLVSFGGALPFARRALVEERRWLTPEEFTDLLGL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHH CQFLPGGNVINLSVAVGMRFRGVPGALAGLLGLIAGPTLVVVGLGVIYARTQGDPRVQHL HHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH FGGLAAAAAGLLIAMAVKVARPLRQAPAAAGVALLAFAAIAVARLPLLATMLVLTPLSIW HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LASRARTLPAGGRR HHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]