| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is ywrA [H]
Identifier: 238028837
GI number: 238028837
Start: 3760037
End: 3760564
Strand: Reverse
Name: ywrA [H]
Synonym: bglu_1g33020
Alternate gene names: 238028837
Gene position: 3760564-3760037 (Counterclockwise)
Preceding gene: 238028838
Following gene: 238028836
Centisome position: 96.26
GC content: 73.11
Gene sequence:
>528_bases ATGAACGGCACGCTCGTCGCGCTGGCCGCGATCTTCTCGCAACTGTCGCTGCTCGCGTTCGGCGGCGGCAACACGATCCT GCCCGAGATGCAGCGGCAGGTGGTGGAGATCCACCACTGGATGCCCGCCACCGAGTTCACGGCGCTGTTCGCGCTGGCGC AGGCCGCGCCCGGGCCGAACATGATGGTCGTGCCGCTGGTGGGCTGGCACGTGGCCGGCTGGGCCGGGCTGCTGGTGGCG TCGCTCGCGAAATTCGGGCCGTCCTCGGCGGTCACGATGCTGGTGCTGCACGGCTGGGAGCGCTTTCGCGACCGGCCGTG GCGCCGCTACGTGCAGCAGGGCATGATGCCCGTCACCGCGGGCCTGGTGGCCGCGAGCGCGCTGCTGATCTCGCAGGCCT CGAACCGTTCGGCGCTGCAGTGGGGCATCACCGCCGCATGCGCGGCGCTGGCCTGGCGCACGCGCCTGCATCCGCTCTGG CTGCTGGCCGGCGGCGCGCTGGCCGGGCTGGCCGGCGCCTGGCTGTAG
Upstream 100 bases:
>100_bases CCGTGGCGCGGCTGCCGCTGCTCGCCACCATGCTGGTGCTCACGCCGCTGAGCATCTGGCTCGCCTCGCGCGCACGCACG CTGCCCGCCGGAGGCCGGCG
Downstream 100 bases:
>100_bases CGGCGCGCGCCGCACCGCAGCAACGCGGCGCGGCGCGCCCGCCGCAATCCGCAGCATTCCCTATCGTTGCGTGTTGGCGA CAATCGCGTGCGCTTCGGCG
Product: chromate transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MNGTLVALAAIFSQLSLLAFGGGNTILPEMQRQVVEIHHWMPATEFTALFALAQAAPGPNMMVVPLVGWHVAGWAGLLVA SLAKFGPSSAVTMLVLHGWERFRDRPWRRYVQQGMMPVTAGLVAASALLISQASNRSALQWGITAACAALAWRTRLHPLW LLAGGALAGLAGAWL
Sequences:
>Translated_175_residues MNGTLVALAAIFSQLSLLAFGGGNTILPEMQRQVVEIHHWMPATEFTALFALAQAAPGPNMMVVPLVGWHVAGWAGLLVA SLAKFGPSSAVTMLVLHGWERFRDRPWRRYVQQGMMPVTAGLVAASALLISQASNRSALQWGITAACAALAWRTRLHPLW LLAGGALAGLAGAWL >Mature_175_residues MNGTLVALAAIFSQLSLLAFGGGNTILPEMQRQVVEIHHWMPATEFTALFALAQAAPGPNMMVVPLVGWHVAGWAGLLVA SLAKFGPSSAVTMLVLHGWERFRDRPWRRYVQQGMMPVTAGLVAASALLISQASNRSALQWGITAACAALAWRTRLHPLW LLAGGALAGLAGAWL
Specific function: Unknown
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003370 [H]
Pfam domain/function: PF02417 Chromate_transp [H]
EC number: NA
Molecular weight: Translated: 18662; Mature: 18662
Theoretical pI: Translated: 11.66; Mature: 11.66
Prosite motif: PS01036 HSP70_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGTLVALAAIFSQLSLLAFGGGNTILPEMQRQVVEIHHWMPATEFTALFALAQAAPGPN CCCHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC MMVVPLVGWHVAGWAGLLVASLAKFGPSSAVTMLVLHGWERFRDRPWRRYVQQGMMPVTA EEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHH GLVAASALLISQASNRSALQWGITAACAALAWRTRLHPLWLLAGGALAGLAGAWL HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCHHHHHHHHCCC >Mature Secondary Structure MNGTLVALAAIFSQLSLLAFGGGNTILPEMQRQVVEIHHWMPATEFTALFALAQAAPGPN CCCHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC MMVVPLVGWHVAGWAGLLVASLAKFGPSSAVTMLVLHGWERFRDRPWRRYVQQGMMPVTA EEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHH GLVAASALLISQASNRSALQWGITAACAALAWRTRLHPLWLLAGGALAGLAGAWL HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]