| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is cusR [H]
Identifier: 238028823
GI number: 238028823
Start: 3740530
End: 3741204
Strand: Direct
Name: cusR [H]
Synonym: bglu_1g32880
Alternate gene names: 238028823
Gene position: 3740530-3741204 (Clockwise)
Preceding gene: 238028822
Following gene: 238028824
Centisome position: 95.75
GC content: 70.96
Gene sequence:
>675_bases ATGTCGAAGATCCTGACGATCGAGGACGATGTCCTGATCGCCGACAGCATCACGCGCCAGCTGCAGGCCGAGGGCCATAC GGTGGACCTCGCGCGCACCGGCCGCGACGGCATCGCCAAGGTGATGGCGGGCGACTACGACGCGGTCACGCTCGACCGCA TGCTGCCGGACCTCGACGGGCTCGCGATCCTCGCCACCATGCGCGGCGTCGGGCTCGACACGCCGGTGCTGGTGATGAGC GCGATGTCGGAAGTGGACCAGCGCATCGCGGGCCTGCGCGCCGGCGGCGACGACTATCTGGTCAAGCCGTTCTCGCTGGC CGAGATGGTGGCGCGGCTCGAGGTGCTGATGCGCCGCCGCCCGCGCAGCGCCCATGCCGACACGGTGCTGCGCGCTGGCG GCATCGAGCTCGACCTCGTCCGGCGCCGCGCCTCGCTCGGCGCGCGCGAGCTGCAACTGCTGCCCACCGAGTTCCGCGTG CTCGAATTCATGATGCGCCACGCGGGCCGCGTGCTCACGCGCACCATGATCTTCGAGGGGGTATGGGGCTGCCGGTTCGA TCCCGGCACCAACCTGATCGACGTCCACGTCGGCCGCCTGCGCCGCAAGATCAACCGCCCCGGCGAAGCCCCGCTGATCC GCACCATCCGCGGCGCGGGCTACCTGCTCGGCTGA
Upstream 100 bases:
>100_bases CTCTCCATGAAGGTGCGCAGCTTCGTCGATTTCGCGGTGGGCCGCTATCGCGGCGCCGACCGCGCCGCGCCGCTGCGCGC CGTCGCCTGACCCGCGGCCC
Downstream 100 bases:
>100_bases CGCGCCGGGGCCGCGACTGCCGGCTCGCGCACCCGTTGCCCAGGCTGCCTGGACGAGCGCCGCGCGAACGCGGCCGCCTG CCGGCGCGGGTCGCGCGCGC
Product: winged helix family two component transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MSKILTIEDDVLIADSITRQLQAEGHTVDLARTGRDGIAKVMAGDYDAVTLDRMLPDLDGLAILATMRGVGLDTPVLVMS AMSEVDQRIAGLRAGGDDYLVKPFSLAEMVARLEVLMRRRPRSAHADTVLRAGGIELDLVRRRASLGARELQLLPTEFRV LEFMMRHAGRVLTRTMIFEGVWGCRFDPGTNLIDVHVGRLRRKINRPGEAPLIRTIRGAGYLLG
Sequences:
>Translated_224_residues MSKILTIEDDVLIADSITRQLQAEGHTVDLARTGRDGIAKVMAGDYDAVTLDRMLPDLDGLAILATMRGVGLDTPVLVMS AMSEVDQRIAGLRAGGDDYLVKPFSLAEMVARLEVLMRRRPRSAHADTVLRAGGIELDLVRRRASLGARELQLLPTEFRV LEFMMRHAGRVLTRTMIFEGVWGCRFDPGTNLIDVHVGRLRRKINRPGEAPLIRTIRGAGYLLG >Mature_223_residues SKILTIEDDVLIADSITRQLQAEGHTVDLARTGRDGIAKVMAGDYDAVTLDRMLPDLDGLAILATMRGVGLDTPVLVMSA MSEVDQRIAGLRAGGDDYLVKPFSLAEMVARLEVLMRRRPRSAHADTVLRAGGIELDLVRRRASLGARELQLLPTEFRVL EFMMRHAGRVLTRTMIFEGVWGCRFDPGTNLIDVHVGRLRRKINRPGEAPLIRTIRGAGYLLG
Specific function: Member of the two-component regulatory system CusS/CusR. Activates the expression of cusCFBA in response to increasing levels of copper ions, and probably silver ions [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1786784, Length=221, Percent_Identity=40.7239819004525, Blast_Score=174, Evalue=4e-45, Organism=Escherichia coli, GI1789402, Length=222, Percent_Identity=44.5945945945946, Blast_Score=168, Evalue=2e-43, Organism=Escherichia coli, GI87082012, Length=220, Percent_Identity=39.5454545454545, Blast_Score=156, Evalue=1e-39, Organism=Escherichia coli, GI1790552, Length=221, Percent_Identity=37.5565610859729, Blast_Score=149, Evalue=1e-37, Organism=Escherichia coli, GI1786599, Length=221, Percent_Identity=32.579185520362, Blast_Score=127, Evalue=8e-31, Organism=Escherichia coli, GI1786911, Length=222, Percent_Identity=33.7837837837838, Blast_Score=122, Evalue=2e-29, Organism=Escherichia coli, GI1787375, Length=221, Percent_Identity=31.6742081447964, Blast_Score=122, Evalue=2e-29, Organism=Escherichia coli, GI1790860, Length=222, Percent_Identity=33.3333333333333, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI2367329, Length=231, Percent_Identity=32.9004329004329, Blast_Score=109, Evalue=1e-25, Organism=Escherichia coli, GI1788394, Length=220, Percent_Identity=30, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1789809, Length=227, Percent_Identity=28.6343612334802, Blast_Score=93, Evalue=1e-20, Organism=Escherichia coli, GI1787229, Length=229, Percent_Identity=28.82096069869, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1790863, Length=230, Percent_Identity=26.9565217391304, Blast_Score=77, Evalue=7e-16, Organism=Escherichia coli, GI145693140, Length=235, Percent_Identity=25.9574468085106, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1790437, Length=111, Percent_Identity=32.4324324324324, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1788550, Length=109, Percent_Identity=30.2752293577982, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1788191, Length=121, Percent_Identity=33.8842975206612, Blast_Score=61, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR006291 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 24742; Mature: 24611
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKILTIEDDVLIADSITRQLQAEGHTVDLARTGRDGIAKVMAGDYDAVTLDRMLPDLDG CCCEEEECCCEEEHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCCCCCEEHHHHCCCCCC LAILATMRGVGLDTPVLVMSAMSEVDQRIAGLRAGGDDYLVKPFSLAEMVARLEVLMRRR HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHHCC PRSAHADTVLRAGGIELDLVRRRASLGARELQLLPTEFRVLEFMMRHAGRVLTRTMIFEG CCCCCHHHHHHCCCCHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC VWGCRFDPGTNLIDVHVGRLRRKINRPGEAPLIRTIRGAGYLLG CCCCEECCCCCEEHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCC >Mature Secondary Structure SKILTIEDDVLIADSITRQLQAEGHTVDLARTGRDGIAKVMAGDYDAVTLDRMLPDLDG CCEEEECCCEEEHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCCCCCEEHHHHCCCCCC LAILATMRGVGLDTPVLVMSAMSEVDQRIAGLRAGGDDYLVKPFSLAEMVARLEVLMRRR HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHHCC PRSAHADTVLRAGGIELDLVRRRASLGARELQLLPTEFRVLEFMMRHAGRVLTRTMIFEG CCCCCHHHHHHCCCCHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC VWGCRFDPGTNLIDVHVGRLRRKINRPGEAPLIRTIRGAGYLLG CCCCEECCCCCEEHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]