| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is cscK [H]
Identifier: 238028807
GI number: 238028807
Start: 3724409
End: 3725335
Strand: Direct
Name: cscK [H]
Synonym: bglu_1g32710
Alternate gene names: 238028807
Gene position: 3724409-3725335 (Clockwise)
Preceding gene: 238028806
Following gene: 238028808
Centisome position: 95.34
GC content: 73.14
Gene sequence:
>927_bases ATGATGAGCGGCACTTCGCCTGACACGCCCTTTCCGCGGTTCGTCTCGGCCGGCGACATCCTGACCGACATGGTTCGCCA CGACGCCGCGCAATGGACCTCGGTGCCGGGCGGCGCCGGCTGGAACGTGGCGCGCGCGGTGGCGCGGCTCGGCGTGCCGA GCGCCGCGGTGGGCGCGCTCGGCCGCGACTGCTTCTCCGACGTGCTGTGGCGCGAGAGCGAGGCGGCCGGTCTCGACCTG CGCTTTCTGCAGCGCGTCGACCGGCCGCCGCTGCTGGCGGTGGTCCACCAGACCCGGCCGCCCGCCTACTTCTTCATCGG CGAGAACAGCGCCGATCTGGCGTTCGATCCGGCCGCGCTGCCGGCAGGCTGGGAAGCGCCGCTCGAATGGGCGCATTTCG GCTGCATCAGCCTCGTGCGCGAGCCGCTCGCCAGCACGCTGATCGCGCTGGCGGGCACGCTGCGTGCCAAGGGCGTGAAG ATCAGCTTCGACCCGAATTACCGCAACCTGATGACGGCCGCGTACCGGCCCACGCTCGAGAAGATGGTGAAGCTGGCCGA TCTCGTGAAGGTGTCCGACGAGGACCTGCGCCACCTGTTCGACGGTGACGAGGCCGAGGCGATCGCCACGCTGCGCGCGC TGAACCCGGCGGCCGCGTTGCTGGTCACGCGCGGCGCACAGCCGGCCACGCTCTATGCCGACGGCCAGACGCTCGAGGCG CAGCCGCCGCGCGTGGAGGTGGCCGACACCGTCGGTGCCGGCGACGCCTCGATCGGCGGCCTGCTGGTGAGCCTGATGAC GGCGCCGCGGCGCGGCTGGGGCGAGCATCTGGCGTTCGCGCTCGCGGCCGGCGCGGCCGCCTGCCGGCACACGGGCGCGC ATGCGCCGACGCTCGACGAGGTCGACGCGCTGCTCGGCACGCGGTGA
Upstream 100 bases:
>100_bases CCGGCAAGACCGACTATCACACCATGGGCGCCTGCTACGAGGTGCTCAACGCGCTGCCCGGCGCGAGCGGCAACGCCCTC GCGCATCGCAAGGAGAACGC
Downstream 100 bases:
>100_bases TGCACGCGGCGCGGGCGGCGCGGGCGGCCCCACCGCGCCGCCCGCAGATAATCCGGCGGCGCCCCGCGCGCGATGCTAGG ATGCAAGCTCCCCTCTACGG
Product: PfkB domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MMSGTSPDTPFPRFVSAGDILTDMVRHDAAQWTSVPGGAGWNVARAVARLGVPSAAVGALGRDCFSDVLWRESEAAGLDL RFLQRVDRPPLLAVVHQTRPPAYFFIGENSADLAFDPAALPAGWEAPLEWAHFGCISLVREPLASTLIALAGTLRAKGVK ISFDPNYRNLMTAAYRPTLEKMVKLADLVKVSDEDLRHLFDGDEAEAIATLRALNPAAALLVTRGAQPATLYADGQTLEA QPPRVEVADTVGAGDASIGGLLVSLMTAPRRGWGEHLAFALAAGAAACRHTGAHAPTLDEVDALLGTR
Sequences:
>Translated_308_residues MMSGTSPDTPFPRFVSAGDILTDMVRHDAAQWTSVPGGAGWNVARAVARLGVPSAAVGALGRDCFSDVLWRESEAAGLDL RFLQRVDRPPLLAVVHQTRPPAYFFIGENSADLAFDPAALPAGWEAPLEWAHFGCISLVREPLASTLIALAGTLRAKGVK ISFDPNYRNLMTAAYRPTLEKMVKLADLVKVSDEDLRHLFDGDEAEAIATLRALNPAAALLVTRGAQPATLYADGQTLEA QPPRVEVADTVGAGDASIGGLLVSLMTAPRRGWGEHLAFALAAGAAACRHTGAHAPTLDEVDALLGTR >Mature_308_residues MMSGTSPDTPFPRFVSAGDILTDMVRHDAAQWTSVPGGAGWNVARAVARLGVPSAAVGALGRDCFSDVLWRESEAAGLDL RFLQRVDRPPLLAVVHQTRPPAYFFIGENSADLAFDPAALPAGWEAPLEWAHFGCISLVREPLASTLIALAGTLRAKGVK ISFDPNYRNLMTAAYRPTLEKMVKLADLVKVSDEDLRHLFDGDEAEAIATLRALNPAAALLVTRGAQPATLYADGQTLEA QPPRVEVADTVGAGDASIGGLLVSLMTAPRRGWGEHLAFALAAGAAACRHTGAHAPTLDEVDALLGTR
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 - InterPro: IPR002139 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: =2.7.1.4 [H]
Molecular weight: Translated: 32593; Mature: 32593
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: PS00583 PFKB_KINASES_1 ; PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSGTSPDTPFPRFVSAGDILTDMVRHDAAQWTSVPGGAGWNVARAVARLGVPSAAVGAL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHH GRDCFSDVLWRESEAAGLDLRFLQRVDRPPLLAVVHQTRPPAYFFIGENSADLAFDPAAL HHHHHHHHHHCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCCEECCCCC PAGWEAPLEWAHFGCISLVREPLASTLIALAGTLRAKGVKISFDPNYRNLMTAAYRPTLE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHH KMVKLADLVKVSDEDLRHLFDGDEAEAIATLRALNPAAALLVTRGAQPATLYADGQTLEA HHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCHHHHHHEECCCCCEEEEECCCEECC QPPRVEVADTVGAGDASIGGLLVSLMTAPRRGWGEHLAFALAAGAAACRHTGAHAPTLDE CCCCEEEHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHH VDALLGTR HHHHHCCC >Mature Secondary Structure MMSGTSPDTPFPRFVSAGDILTDMVRHDAAQWTSVPGGAGWNVARAVARLGVPSAAVGAL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHH GRDCFSDVLWRESEAAGLDLRFLQRVDRPPLLAVVHQTRPPAYFFIGENSADLAFDPAAL HHHHHHHHHHCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCCEECCCCC PAGWEAPLEWAHFGCISLVREPLASTLIALAGTLRAKGVKISFDPNYRNLMTAAYRPTLE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHH KMVKLADLVKVSDEDLRHLFDGDEAEAIATLRALNPAAALLVTRGAQPATLYADGQTLEA HHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCHHHHHHEECCCCCEEEEECCCEECC QPPRVEVADTVGAGDASIGGLLVSLMTAPRRGWGEHLAFALAAGAAACRHTGAHAPTLDE CCCCEEEHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHH VDALLGTR HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA